Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g005940.3.1
CDS Infomation

Vacuolar ATPase subunit H protein (AHRD V3.3 *** B6SIW6_MAIZE)
Sequence

ATGTGTGGAATCTATGACCTGTCGGGTTTTGAGATATTTCCGTGGAATCTATACAGGATA
GAGGAAGAACGATCCATATTCTGGCTATTTGATAAGAAGAAAACAAATTTTGGATTTGAA
GGGCATAATCACAATGACAACGGAGAGCGTGGAGCTTACTACGGAGGAGGCATCAATTTT
GAGAAGGAGAAAGAATTTGTTGGTGTCAGGGTTTTGAGGAGGGATATCCCATGGGAGACA
TACATGACTACAAAGCTGATCACTGGAACTGGTTTGCAGCTGTTGAGGCGCTATGACAAG
AAGGCAGAAAGTTACAAAGCCCAGTTGCTGGATGATGATGGTCCAGGTTATGTCCGCGTC
TTTGTTACCATTTTACGTGACATCTTCAAGGAAGAAACCGTGGAATATGTTTTGGCTTTG
ATTGATGAAATGCTTACAGATTGCTGTGGAAAGGTAATTGGTTCATACAAGAGAAGAGCT
AATGGTGCTGATGCCAATGGAGATGCCTCAAGTTCAAAGAAGAAAATCACTACCATTGAC
GATGTTCTGGCAGGCGTGGTGGAGTGGCTTTGTGCACAGCTGAGAAAGCCTACTCATCCT
ACACGCAGCATTGCTAGCACAATCAACTGCCTATCAACTCTGTTGAAAGAGCCAGTTGTT
CGATCTTCATTTGTTCGAGCTGATGGAGTGAAGTTGCTTGTACCTTTAATTTCACCAGCA
TCGACCCAGCAGTCTATCCAGCCTCTCTATGAGACATGCCTTTGTGTGTGGCTTTTGTCA
TACTATGAACCTGCAATAGAGTATTTAGCTACTTCAAGGGCCCTCACTCGATTGATAGAA
GTTGTTAAAGGTTCAACAAAAGAGAAGGTTGTACGGGTTGTCATCTTGACTCTTCGGAAT
TTGCTTTCCAAAGGAACATTTAGTGCTCATATGGTTGACCTGGGAGTGCTGCAAATTGTT
CAGAGTTTGAAAGCACAGGCTTGGAGTGATGAGGATCTTTTGGACGCTCTGAATCAACTA
GAACAAGGATTGAAGGAAAACATCAAAAAGCTGAGTTCATTTGACAAGTACAAGCAGGAA
GTCCTCCTTGGCCATCTTGATTGGTCCCCAATGCACAAAGATCCTATATTCTGGCGGGAG
AACATAAATAATTTTGAGGAGAATGATTTCCAGATCTTGAGGGTGCTCATTACAATTCTT
GACACATCAAGTGATGCAAGGACACTTGCTGTTGCTTGCTATGATCTATCACAGTTCATT
CAGTGCCATTCTGCTGGGCGAATTATAGTGAATGACCTCAAAGCTAAGGAGCGCGTAATG
AGACTGTTGAACCACGATAATGCTGAGGTCACGAAAAACGCTTTGCTCTGTATCCAAAGG
CTTTTCCTCGGTGCCAAGTATGCTAGCTTTTTGCAGGCTTAA

Peptide Sequence

PEP ID

Solyc07g005940.3.1
PEP Infomation

Vacuolar ATPase subunit H protein (AHRD V3.3 *** B6SIW6_MAIZE)
Sequence

MCGIYDLSGFEIFPWNLYRIEEERSIFWLFDKKKTNFGFEGHNHNDNGERGAYYGGGINF
EKEKEFVGVRVLRRDIPWETYMTTKLITGTGLQLLRRYDKKAESYKAQLLDDDGPGYVRV
FVTILRDIFKEETVEYVLALIDEMLTDCCGKVIGSYKRRANGADANGDASSSKKKITTID
DVLAGVVEWLCAQLRKPTHPTRSIASTINCLSTLLKEPVVRSSFVRADGVKLLVPLISPA
STQQSIQPLYETCLCVWLLSYYEPAIEYLATSRALTRLIEVVKGSTKEKVVRVVILTLRN
LLSKGTFSAHMVDLGVLQIVQSLKAQAWSDEDLLDALNQLEQGLKENIKKLSSFDKYKQE
VLLGHLDWSPMHKDPIFWRENINNFEENDFQILRVLITILDTSSDARTLAVACYDLSQFI
QCHSAGRIIVNDLKAKERVMRLLNHDNAEVTKNALLCIQRLFLGAKYASFLQA*

Transcript Sequence

Transcript ID

Solyc07g005940.3.1
Transcript Infomation

Vacuolar ATPase subunit H protein (AHRD V3.3 *** B6SIW6_MAIZE)
Sequence

ATGTGTGGAATCTATGACCTGTCGGGTTTTGAGATATTTCCGTGGAATCTATACAGGATA
GAGGAAGAACGATCCATATTCTGGCTATTTGATAAGAAGAAAACAAATTTTGGATTTGAA
GGGCATAATCACAATGACAACGGAGAGCGTGGAGCTTACTACGGAGGAGGCATCAATTTT
GAGAAGGAGAAAGAATTTGTTGGTGTCAGGGTTTTGAGGAGGGATATCCCATGGGAGACA
TACATGACTACAAAGCTGATCACTGGAACTGGTTTGCAGCTGTTGAGGCGCTATGACAAG
AAGGCAGAAAGTTACAAAGCCCAGTTGCTGGATGATGATGGTCCAGGTTATGTCCGCGTC
TTTGTTACCATTTTACGTGACATCTTCAAGGAAGAAACCGTGGAATATGTTTTGGCTTTG
ATTGATGAAATGCTTACAGATTGCTGTGGAAAGGTAATTGGTTCATACAAGAGAAGAGCT
AATGGTGCTGATGCCAATGGAGATGCCTCAAGTTCAAAGAAGAAAATCACTACCATTGAC
GATGTTCTGGCAGGCGTGGTGGAGTGGCTTTGTGCACAGCTGAGAAAGCCTACTCATCCT
ACACGCAGCATTGCTAGCACAATCAACTGCCTATCAACTCTGTTGAAAGAGCCAGTTGTT
CGATCTTCATTTGTTCGAGCTGATGGAGTGAAGTTGCTTGTACCTTTAATTTCACCAGCA
TCGACCCAGCAGTCTATCCAGCCTCTCTATGAGACATGCCTTTGTGTGTGGCTTTTGTCA
TACTATGAACCTGCAATAGAGTATTTAGCTACTTCAAGGGCCCTCACTCGATTGATAGAA
GTTGTTAAAGGTTCAACAAAAGAGAAGGTTGTACGGGTTGTCATCTTGACTCTTCGGAAT
TTGCTTTCCAAAGGAACATTTAGTGCTCATATGGTTGACCTGGGAGTGCTGCAAATTGTT
CAGAGTTTGAAAGCACAGGCTTGGAGTGATGAGGATCTTTTGGACGCTCTGAATCAACTA
GAACAAGGATTGAAGGAAAACATCAAAAAGCTGAGTTCATTTGACAAGTACAAGCAGGAA
GTCCTCCTTGGCCATCTTGATTGGTCCCCAATGCACAAAGATCCTATATTCTGGCGGGAG
AACATAAATAATTTTGAGGAGAATGATTTCCAGATCTTGAGGGTGCTCATTACAATTCTT
GACACATCAAGTGATGCAAGGACACTTGCTGTTGCTTGCTATGATCTATCACAGTTCATT
CAGTGCCATTCTGCTGGGCGAATTATAGTGAATGACCTCAAAGCTAAGGAGCGCGTAATG
AGACTGTTGAACCACGATAATGCTGAGGTCACGAAAAACGCTTTGCTCTGTATCCAAAGG
CTTTTCCTCGGTGCCAAGTATGCTAGCTTTTTGCAGGCTTAAGTCTTTTCGAATGGTTTC
ATTCCATTGTTCAGACGACAGGAACTAGACTCATCTCGTTATTTCCTTGGACACAAGGAG
TTTGTGGTCGTGGTCATGGTCGTGGTCTTGTTAATTTATTTGTTGTATCCTATTCGAGTA
CTGTATCTAAGGCGTCTTCTTGGTGAGATTATCATTCCAAATAAGGTCTATGAGTTGATT
CTAATTTCCCCTCCAATAAAAGGAAGTTTGTATTGACATATTTATCGAACCGGGGAATTG
TTTTGTGGTATATACTATCTGGAATTACTGTTCAAACAACTTATTAATCCGATGATTTTG
TATTATCGGTATGGTTTTATGTATGGAGGCTTATAGCCTAGTGATATCATCGAGAGATAG
ACAGCTGAGTTTGTAGTGCTTTTCTGGAATTTGTATCTCATGGTGGAAAAGGAAAAGAAA