Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc07g005880.3.1
CDS Infomation	Replication factor C subunit 1 (AHRD V3.3 *** A0A061FPV6_THECC)
Sequence	ATGTCAGATATCAGGAAATGGTTCATGAAGCAGCATGACAAAGGCACGGGTAATGGGAGC ATGTCCAAGAATAGTGCAGCAGAAAAGCCTTCTCCCACTAGTCCAAAGCCAGAAAACCTG GTACAAGAAGGACAAGAGACTGCCAACAGAAGGAAAACTAGTAAATATTTTGCTACAGAC AAGGTTAAGGCAAAGGAAGAAAAAGTTGAGGAAGTGTCAGCAAAAAGAAAAGCTCCAAAT GCTGCTGGAATTTCATCAGCACCAGCTGCAAAAAGAATTCATAAAGCTGAGGATGAAGAT GACTTTGTACCAGTGGTATCGGCAATGGGATCCAGAGATGTCACTCCCAGCAAAAAGTCG GTAAGTGGCTCTGGAAGGGGATCCGCGCAGAAAAATGTGATCAGTGATGATAGTGATGAT GATCTTAAGAACAAAAATTCTGATCTCAAATCTGCTGGAAGAGGGCGGGGTGGACGGGCA GCTAAGACCAGCGGAAAGGGTGTTCCTCTTGATGAAAGTGAAGATGATGCTTCAGCTGTC AAGGACAACAAATCTGGTGGACGAGGGCGTGGTGGTAAAGGACCATCTGCAGCACCAAGC GGTGGACGAGGTAGAGGTGGTGGAGGACGGGGAGGTTTCATGAACTTTGGTGAAAGAAAA GATCCTCCTCACAAGGGGGAAAAGGAAGTTCCTGAAGGTGCCCCAGACTGTTTAGCTGGT TTGACTTTTGTAATTAGTGGAACTCTCGACAGTTTAGAAAGAGAAGAAGCTGAGGATTTG ATTAAACGCCATGGTGGTCGTGTCACAGGATCTGTTAGCAAGAAAACAACTTATCTTTTA TGTGATGAAGACGTCGAGGGACGGAAATCCTCTAAAGCCAAGGAGCTCGGAACTGCATTT CTCACTGAGGATGGTTTGTTTGAATTGATCCGGTCATCAAAAAAATCAAAATCAGCTACA CAACCCGAGTCAAAGAAATCTGTGGACACCATTGTTTCTTCTGGAAAGAGAAATTCACAA AAAACAAGTGATGGAACAGGAAGCACTGCCACAAAGATTCTAGCTGCCAAACAATTGGCA CCTAGTGCATCTCCTGCCAAAATTAGTGGATCTCCTGCTAAAAGTAGTGCATCTCCTGCC AAGAAGAAAACCCAAGCTAAAGAGTCTTTACTACCATGGACAGAAAAATACAGACCCAAA GCTATTGTAGACATAATAGGGAACAAGTCACTGGTGGAGCAGATTCAGCGTTGGCTAGAG AGCTGGGATGAGCATTTTCTAAAGGCATCTAGTAAGGGTAAGGGGAAAAAACAGGCTGAC TCTGGTGCTAAAAAAGCAGTTCTGTTGAGTGGTATGCCGGGTATAGGGAAGACTACATCA GCAAAAGTGGTTAGTCAGTTGCTGGGATTTCAAACGATCGAGGTAAATGCTAGTGATAGT CGTGGAAAGGCTGACTCAAAAATTGAGAAAGGAATAGGCGGAAGTACTGCTAATTCCATA AAAGAACTTGTTAGCAATGAATCTCTAAGCGCCAATGTTGGCAGATCACACCATCAGAAG ACTGTTCTGATTATGGACGAGGTTGATGGCATGTCTGCTGGAGATAGAGGTGGTGTTGCC GATCTTATTGCTAGCATCAAGATCTCGAAAATTCCTATTATCTGCATTTGCAATGATCGC TACAGTCAGAAATTGAAGAGCCTTGTCAATTATTGCCTACCAATTGTCTTCCGTAAACCA ACTAAGCAGCAGATGGCAAAGAGGTTAAATCAAGTAGCAAATGCTGAAGGCATTCAAGTC AATGAGATTGCTCTTGAGGAATTGGCAGAACGTGTTGGAGGAGATATGCGTATGGCTCTA AATCAATTGCAATACATGAGTCTCTCTAAGTCTGTCATCCAATACGATGACATAAGACGC CGTCTTCTAAGCAGTTCAAAGGATGAAGATATCTCACCGTTCAAAGCTGTAGAAAAGCTG TTTGATTTTAATTCCAAGAACTTGAAAATAGATCAAAGAATTGACCTAAGTATGAGCGAC CCAGATCTTGTCCCACTTCTTGTCCAGGAGAATTATCTCAACTACAAACCAAGTTCTGCT GGCAAAGATGATAATGATTTAAAGCGGATGAGCCTAATTGCGCATGCTGCTGACTCTATT GCAAACAGTGACTTAATAAATGTACAGATTCGAAGATACCAGCAATGGCAACTTTCTCCA GCTGGTTGCCTTTCGTCTTGCATAATTCCTGCTTCTTTGTTGCACGGACAGAGGCAGACT CTTGAGCAGGGAGAGCGCAACTTTAACAGGTTTGGCGGCTGGCTAGGAAAGAATTCTACA ATGGGAAAGAATTACCGGATTCTGGAGGAATTGCATGTCCACCTACTCGCATCTCGTGAA TCTTATCTGGGAAGGGCAAACCTGAGACTTGACTACTTTTCTCTTCTTGGAAAGAAGTTG ACAGATCCATTAAAAGTGCTGCCTAAGGATGAAGCTGTAGAGAATGTTGTGGCTTTCATG GATTCTTACTCTATAAGCCAGGAGGACTTCGATAATATTGTGGAGATATCAAAATTCAAG GGACAACCGAATCTTCTGGATGGTGTACAGCCTGCTGTGAAAGCGGCACTGACAAAGGCA TACAACAAAGGAAGCAAATCACGTGTTATTCGCACAGCAGATTTAATTACCCTTCCTGGA ATTAAAAAAGCTCCTAAGAAGCGCGTTGCAGCAATGCTGGAGCCACTAGATGAAGGTGTA GCTGAAGAAAATGATGAAACACTTGCTGAAGATGAAGAGAATTCATCAGATACAGAAGAC ATAGATGTTGGGAAAAAATTGCAGTCGGATCTTCAGAGTCTCAGTTTGAGAGGGATCGAA GTAAACATGGACTTGAAGGGTGCCGGGAGTTCAGGTAGCAAGAAGACGTCTGCAGGGAGA GGACGAGGACGAGGAAGTTCTAATAGCAGTGCAACCGCTGAATCCTCAGGTAAGAGAGGT GGTCGGGGTTCTGGAGCTGCTGCCAAGAGAAAGAGGTGA

Peptide Sequence

PEP ID	Solyc07g005880.3.1
PEP Infomation	Replication factor C subunit 1 (AHRD V3.3 *** A0A061FPV6_THECC)
Sequence	MSDIRKWFMKQHDKGTGNGSMSKNSAAEKPSPTSPKPENLVQEGQETANRRKTSKYFATD KVKAKEEKVEEVSAKRKAPNAAGISSAPAAKRIHKAEDEDDFVPVVSAMGSRDVTPSKKS VSGSGRGSAQKNVISDDSDDDLKNKNSDLKSAGRGRGGRAAKTSGKGVPLDESEDDASAV KDNKSGGRGRGGKGPSAAPSGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAG LTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTTYLLCDEDVEGRKSSKAKELGTAF LTEDGLFELIRSSKKSKSATQPESKKSVDTIVSSGKRNSQKTSDGTGSTATKILAAKQLA PSASPAKISGSPAKSSASPAKKKTQAKESLLPWTEKYRPKAIVDIIGNKSLVEQIQRWLE SWDEHFLKASSKGKGKKQADSGAKKAVLLSGMPGIGKTTSAKVVSQLLGFQTIEVNASDS RGKADSKIEKGIGGSTANSIKELVSNESLSANVGRSHHQKTVLIMDEVDGMSAGDRGGVA DLIASIKISKIPIICICNDRYSQKLKSLVNYCLPIVFRKPTKQQMAKRLNQVANAEGIQV NEIALEELAERVGGDMRMALNQLQYMSLSKSVIQYDDIRRRLLSSSKDEDISPFKAVEKL FDFNSKNLKIDQRIDLSMSDPDLVPLLVQENYLNYKPSSAGKDDNDLKRMSLIAHAADSI ANSDLINVQIRRYQQWQLSPAGCLSSCIIPASLLHGQRQTLEQGERNFNRFGGWLGKNST MGKNYRILEELHVHLLASRESYLGRANLRLDYFSLLGKKLTDPLKVLPKDEAVENVVAFM DSYSISQEDFDNIVEISKFKGQPNLLDGVQPAVKAALTKAYNKGSKSRVIRTADLITLPG IKKAPKKRVAAMLEPLDEGVAEENDETLAEDEENSSDTEDIDVGKKLQSDLQSLSLRGIE VNMDLKGAGSSGSKKTSAGRGRGRGSSNSSATAESSGKRGGRGSGAAAKRKR*

Transcript Sequence

Transcript ID	Solyc07g005880.3.1
Transcript Infomation	Replication factor C subunit 1 (AHRD V3.3 *** A0A061FPV6_THECC)
Sequence	TGTCTCGATTAACCGGTTAAACCCCACTGCCGGAAAAAAAAGTCTCAATTCTCTAAACCC TACTTCACCGGAGCGACGTTGAATGTAACTGCCGGTTAACTCGTCGTCGGTGACTCCATA ACTTGTCGGAAACCTACTACGATTGGTTGGTAGTCTTGAAGATAAATTGAAATTTTGAAG GAGATATTGCTAATTGCAGATCACAAACATGTCAGATATCAGGAAATGGTTCATGAAGCA GCATGACAAAGGCACGGGTAATGGGAGCATGTCCAAGAATAGTGCAGCAGAAAAGCCTTC TCCCACTAGTCCAAAGCCAGAAAACCTGGTACAAGAAGGACAAGAGACTGCCAACAGAAG GAAAACTAGTAAATATTTTGCTACAGACAAGGTTAAGGCAAAGGAAGAAAAAGTTGAGGA AGTGTCAGCAAAAAGAAAAGCTCCAAATGCTGCTGGAATTTCATCAGCACCAGCTGCAAA AAGAATTCATAAAGCTGAGGATGAAGATGACTTTGTACCAGTGGTATCGGCAATGGGATC CAGAGATGTCACTCCCAGCAAAAAGTCGGTAAGTGGCTCTGGAAGGGGATCCGCGCAGAA AAATGTGATCAGTGATGATAGTGATGATGATCTTAAGAACAAAAATTCTGATCTCAAATC TGCTGGAAGAGGGCGGGGTGGACGGGCAGCTAAGACCAGCGGAAAGGGTGTTCCTCTTGA TGAAAGTGAAGATGATGCTTCAGCTGTCAAGGACAACAAATCTGGTGGACGAGGGCGTGG TGGTAAAGGACCATCTGCAGCACCAAGCGGTGGACGAGGTAGAGGTGGTGGAGGACGGGG AGGTTTCATGAACTTTGGTGAAAGAAAAGATCCTCCTCACAAGGGGGAAAAGGAAGTTCC TGAAGGTGCCCCAGACTGTTTAGCTGGTTTGACTTTTGTAATTAGTGGAACTCTCGACAG TTTAGAAAGAGAAGAAGCTGAGGATTTGATTAAACGCCATGGTGGTCGTGTCACAGGATC TGTTAGCAAGAAAACAACTTATCTTTTATGTGATGAAGACGTCGAGGGACGGAAATCCTC TAAAGCCAAGGAGCTCGGAACTGCATTTCTCACTGAGGATGGTTTGTTTGAATTGATCCG GTCATCAAAAAAATCAAAATCAGCTACACAACCCGAGTCAAAGAAATCTGTGGACACCAT TGTTTCTTCTGGAAAGAGAAATTCACAAAAAACAAGTGATGGAACAGGAAGCACTGCCAC AAAGATTCTAGCTGCCAAACAATTGGCACCTAGTGCATCTCCTGCCAAAATTAGTGGATC TCCTGCTAAAAGTAGTGCATCTCCTGCCAAGAAGAAAACCCAAGCTAAAGAGTCTTTACT ACCATGGACAGAAAAATACAGACCCAAAGCTATTGTAGACATAATAGGGAACAAGTCACT GGTGGAGCAGATTCAGCGTTGGCTAGAGAGCTGGGATGAGCATTTTCTAAAGGCATCTAG TAAGGGTAAGGGGAAAAAACAGGCTGACTCTGGTGCTAAAAAAGCAGTTCTGTTGAGTGG TATGCCGGGTATAGGGAAGACTACATCAGCAAAAGTGGTTAGTCAGTTGCTGGGATTTCA AACGATCGAGGTAAATGCTAGTGATAGTCGTGGAAAGGCTGACTCAAAAATTGAGAAAGG AATAGGCGGAAGTACTGCTAATTCCATAAAAGAACTTGTTAGCAATGAATCTCTAAGCGC CAATGTTGGCAGATCACACCATCAGAAGACTGTTCTGATTATGGACGAGGTTGATGGCAT GTCTGCTGGAGATAGAGGTGGTGTTGCCGATCTTATTGCTAGCATCAAGATCTCGAAAAT TCCTATTATCTGCATTTGCAATGATCGCTACAGTCAGAAATTGAAGAGCCTTGTCAATTA TTGCCTACCAATTGTCTTCCGTAAACCAACTAAGCAGCAGATGGCAAAGAGGTTAAATCA AGTAGCAAATGCTGAAGGCATTCAAGTCAATGAGATTGCTCTTGAGGAATTGGCAGAACG TGTTGGAGGAGATATGCGTATGGCTCTAAATCAATTGCAATACATGAGTCTCTCTAAGTC TGTCATCCAATACGATGACATAAGACGCCGTCTTCTAAGCAGTTCAAAGGATGAAGATAT CTCACCGTTCAAAGCTGTAGAAAAGCTGTTTGATTTTAATTCCAAGAACTTGAAAATAGA TCAAAGAATTGACCTAAGTATGAGCGACCCAGATCTTGTCCCACTTCTTGTCCAGGAGAA TTATCTCAACTACAAACCAAGTTCTGCTGGCAAAGATGATAATGATTTAAAGCGGATGAG CCTAATTGCGCATGCTGCTGACTCTATTGCAAACAGTGACTTAATAAATGTACAGATTCG AAGATACCAGCAATGGCAACTTTCTCCAGCTGGTTGCCTTTCGTCTTGCATAATTCCTGC TTCTTTGTTGCACGGACAGAGGCAGACTCTTGAGCAGGGAGAGCGCAACTTTAACAGGTT TGGCGGCTGGCTAGGAAAGAATTCTACAATGGGAAAGAATTACCGGATTCTGGAGGAATT GCATGTCCACCTACTCGCATCTCGTGAATCTTATCTGGGAAGGGCAAACCTGAGACTTGA CTACTTTTCTCTTCTTGGAAAGAAGTTGACAGATCCATTAAAAGTGCTGCCTAAGGATGA AGCTGTAGAGAATGTTGTGGCTTTCATGGATTCTTACTCTATAAGCCAGGAGGACTTCGA TAATATTGTGGAGATATCAAAATTCAAGGGACAACCGAATCTTCTGGATGGTGTACAGCC TGCTGTGAAAGCGGCACTGACAAAGGCATACAACAAAGGAAGCAAATCACGTGTTATTCG CACAGCAGATTTAATTACCCTTCCTGGAATTAAAAAAGCTCCTAAGAAGCGCGTTGCAGC AATGCTGGAGCCACTAGATGAAGGTGTAGCTGAAGAAAATGATGAAACACTTGCTGAAGA TGAAGAGAATTCATCAGATACAGAAGACATAGATGTTGGGAAAAAATTGCAGTCGGATCT TCAGAGTCTCAGTTTGAGAGGGATCGAAGTAAACATGGACTTGAAGGGTGCCGGGAGTTC AGGTAGCAAGAAGACGTCTGCAGGGAGAGGACGAGGACGAGGAAGTTCTAATAGCAGTGC AACCGCTGAATCCTCAGGTAAGAGAGGTGGTCGGGGTTCTGGAGCTGCTGCCAAGAGAAA GAGGTGAAACTGGAAAACATCTCCCTGACCTAATTCTGTCGGTTACAATCATCGGAAGCT GCAGTTTCCCTGGTCTTCTTCCTTGGGAAAAAGAAGCATTTAGGAAACTTGTTTTTAGCT ATTTGTGTAAAAAAAGAGAAGTTCCTAAGTTGATTTATGTATATTCTACTTGAAATTGAT GAATGCTTTTTTTGTGTTAATAGTTTTGGTTTGATTCTCAAATTTTGGCTTCTATTGCCA TTGCTTTGTTCATTCTGTTTTACTATCACTATAACTCTTCATTTTGCTGTGGGAGTATTT CTTATGGTAATGCCAACATCAAATTTTGGCTTTAAAAAATCATGTTTTGAAGCTGAAATT CTCTAAACAAAGTTAGTACTTTTTTC