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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g005760.3.1
CDS Infomation

hydroxycinnamoyl CoA quinate transferase
Sequence

ATGGGAAGTGAAAAAATGATGAAAATTAATATCAAAGAATCAACACTAGTGAAACCATCA
AAACCAACACCAACAAAGAGAATTTGGAGTTCTAATTTGGATTTAATTGTTGGAAGAATT
CATCTTTTGACTGTTTATTTTTATAAACCAAATGGATCTTCAAATTTTTTTGATAATAAA
GTTATTAAAGAAGCATTAAGTAATGTTTTAGTTTCATTTTATCCAATGGCTGGAAGATTA
GGTAGGGATGAACAAGGTAGAATTGAAGTTAATTGTAATGGTGAAGGTGTTTTGTTTGTT
GAGGCTGAAAGTGATTCATGTGTTGATGATTTTGGTGATTTTACACCATCTTTGGAACTT
AGAAAACTCATTCCAAGTGTTGAAACCTCTGGAGATATCTCAACTTTCCCACTAGTTATA
TTTCAGATTACTCGTTTCAAGTGTGGCGGAGTCGCTCTTGGTGGTGGAGTATTCCACACG
TTATCCGATGGTCTCTCATCCATCCACTTCATCAACACGTGGTCGGACATCGCCCGTGGC
CTCTCCGTCGCAGTCCCGCCGTTCATCGATCGGACGCTCCTCCGTGCAAGGGACCCACCG
ACATCTTCTTTCGAGCACGTTGAGTACCATCCTCCACCTACCCTAAACTCATCGAAAAAT
CGCGAGTCCAGTACCACGACCATGTTGAAATTCTCGAGTGAACAACTCGGGCTTCTTAAG
TCCAAGTCCAAAAATGAGGGTAGCACCTATGAAATCCTCGCAGCCCATATTTGGCGATGC
ACGTGCAAGGCACGTGGATTGCCAGAGGATCAATTGACCAAATTACACGTGGCCACCGAC
GGAAGGTCAAGGCTTTGCCCTCCCTTGCCACCGGGTTACCTAGGAAACGTCGTGTTCACG
GCAACCCCAATAGCTAAATCATGCGAACTTCAATCAGAGCCGTTGACAAATTCCGTCAAG
AGAATTCACAACGAGTTGATCAAAATGGACGACAATTACCTAAGATCAGCACTGGATTAC
CTCGAATTACAACCTGATTTATCAACCCTAATTCGGGGCCCGGCTTACTTTGCTAGCCCT
AACCTCAATATTAATAGTTGGACTAGGTTGCCTGTCCATGAGTGTGATTTTGGATGGGGT
AGGCCAATTCATATGGGACCAGCTTGCATTTTATATGAAGGGACAATTTATATTATACCA
AGTCCAAATTCTAAAGATAGGAACTTGCGTTTGGCTGTTTGTCTAGATGCTGGTCACATG
TCACTATTTGAAAAATATTTATATGAATTATGA

Peptide Sequence

PEP ID

Solyc07g005760.3.1
PEP Infomation

hydroxycinnamoyl CoA quinate transferase
Sequence

MGSEKMMKINIKESTLVKPSKPTPTKRIWSSNLDLIVGRIHLLTVYFYKPNGSSNFFDNK
VIKEALSNVLVSFYPMAGRLGRDEQGRIEVNCNGEGVLFVEAESDSCVDDFGDFTPSLEL
RKLIPSVETSGDISTFPLVIFQITRFKCGGVALGGGVFHTLSDGLSSIHFINTWSDIARG
LSVAVPPFIDRTLLRARDPPTSSFEHVEYHPPPTLNSSKNRESSTTTMLKFSSEQLGLLK
SKSKNEGSTYEILAAHIWRCTCKARGLPEDQLTKLHVATDGRSRLCPPLPPGYLGNVVFT
ATPIAKSCELQSEPLTNSVKRIHNELIKMDDNYLRSALDYLELQPDLSTLIRGPAYFASP
NLNINSWTRLPVHECDFGWGRPIHMGPACILYEGTIYIIPSPNSKDRNLRLAVCLDAGHM
SLFEKYLYEL*

Transcript Sequence

Transcript ID

Solyc07g005760.3.1
Transcript Infomation

hydroxycinnamoyl CoA quinate transferase
Sequence

AATAAAAATAAAAGCAAGTTGCACCTTCTAGGTTATTATTGGTTCCAATAAAATAGTATG
GTTAATAATACCCTATACATGTTAGTTTTTAGGCTATAAATAATGATACCCAAACACACA
ATTACTCCTCCATCTTCCTTATCTCTTTAGCTCTTTCTCCCTTCACATTTCACAAATAAT
AATATTCCAAAAATACATATTTTTATTATTTTTAAAAACACCCTTCCCTCTCCTTGACCT
AATTTTTTTTTTTACCTCTTTTGGAAATAAATGGGAAGTGAAAAAATGATGAAAATTAAT
ATCAAAGAATCAACACTAGTGAAACCATCAAAACCAACACCAACAAAGAGAATTTGGAGT
TCTAATTTGGATTTAATTGTTGGAAGAATTCATCTTTTGACTGTTTATTTTTATAAACCA
AATGGATCTTCAAATTTTTTTGATAATAAAGTTATTAAAGAAGCATTAAGTAATGTTTTA
GTTTCATTTTATCCAATGGCTGGAAGATTAGGTAGGGATGAACAAGGTAGAATTGAAGTT
AATTGTAATGGTGAAGGTGTTTTGTTTGTTGAGGCTGAAAGTGATTCATGTGTTGATGAT
TTTGGTGATTTTACACCATCTTTGGAACTTAGAAAACTCATTCCAAGTGTTGAAACCTCT
GGAGATATCTCAACTTTCCCACTAGTTATATTTCAGATTACTCGTTTCAAGTGTGGCGGA
GTCGCTCTTGGTGGTGGAGTATTCCACACGTTATCCGATGGTCTCTCATCCATCCACTTC
ATCAACACGTGGTCGGACATCGCCCGTGGCCTCTCCGTCGCAGTCCCGCCGTTCATCGAT
CGGACGCTCCTCCGTGCAAGGGACCCACCGACATCTTCTTTCGAGCACGTTGAGTACCAT
CCTCCACCTACCCTAAACTCATCGAAAAATCGCGAGTCCAGTACCACGACCATGTTGAAA
TTCTCGAGTGAACAACTCGGGCTTCTTAAGTCCAAGTCCAAAAATGAGGGTAGCACCTAT
GAAATCCTCGCAGCCCATATTTGGCGATGCACGTGCAAGGCACGTGGATTGCCAGAGGAT
CAATTGACCAAATTACACGTGGCCACCGACGGAAGGTCAAGGCTTTGCCCTCCCTTGCCA
CCGGGTTACCTAGGAAACGTCGTGTTCACGGCAACCCCAATAGCTAAATCATGCGAACTT
CAATCAGAGCCGTTGACAAATTCCGTCAAGAGAATTCACAACGAGTTGATCAAAATGGAC
GACAATTACCTAAGATCAGCACTGGATTACCTCGAATTACAACCTGATTTATCAACCCTA
ATTCGGGGCCCGGCTTACTTTGCTAGCCCTAACCTCAATATTAATAGTTGGACTAGGTTG
CCTGTCCATGAGTGTGATTTTGGATGGGGTAGGCCAATTCATATGGGACCAGCTTGCATT
TTATATGAAGGGACAATTTATATTATACCAAGTCCAAATTCTAAAGATAGGAACTTGCGT
TTGGCTGTTTGTCTAGATGCTGGTCACATGTCACTATTTGAAAAATATTTATATGAATTA
TGAGATATTTTTCATATGAAAAAAAAAATCAAGAATGTACAACACAAATTGTGGTGTGAT
TTTGTTCAAGGCATTTTGTTTTGTTTTTTTTTTTATAATTCCAAATTCTTTATTAGGAAT
TTGATTTTGTATTTGTCAATGTCTTACTAAAGCTAAATTACTCCATATTTTCTTTGTGAT
TATACCTAGTTTTCAATTGATTGACTATAGTGGCAATTATCTATGGACGACTTTTCTTTA
T