Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g005330.3.1
CDS Infomation

Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3 *** B9SXY3_RICCO)
Sequence

ATGATAAGCAAAACTTCTTTTGTGCTATTTCTCATTGCTATTGCTCTTTTTCTTCATGAT
GTAACTTCTATAGGTGTTAATTACGGGACTCTCGGAAACAACCTCCCTCCGCCAGCTCAA
GTGGCTCAGTTCATCAAGGATAAAACGGTCATAGACCGTGTAAAGATTTTCGATATCAAC
CCTGACATCCTCCGTGCTTTTGCAAACACAGGAATCTCGCTAACAGTCACAGTACCAAAC
GGCGAGATCCCGAATCTACTGGATCTCGCCTATGCTCGACGATACGTCGAGCAGAATATC
AAACCTCATTACCCACAGACAAAGATGGATGTTATTCTAGTGGGTAATGAGGTTCTTCAC
TGGGATACACCTGAGGTACAGAACAAGCTTGTTCCAGCTATGAAAGTTTTTTACCAAGCT
TTGGGTTTATCTGGGTTGAAGGGTATAAAAGTCTCTTCAGCTCATTCGTTGGGTATTCTA
CTCCGTTCTAACCCACCCAGTGCAGCCCGGTTTCGACCCGGTTGGGATGTGGGTATTCTA
GCTCCGATGCTACAATTTCTTCGTGAAACAAAAGGTCCTTTCATGGTAAATCCCTATCCC
TACTTCGGATACAACAAGAAACAAGAGGATTTTCTTCTATTTAGAAAGAATAAAGGGGTT
TACGATAGATTTTCGAAGAAATGGTATACGAATTCTTTTGATATGTTGTTGGATGCGGTG
TATATGTCGATGGTGAGATTGAAGCATTCAGATGTGGAGATTGTTGCTGCTGAGACAGGG
TGGCCTTCGCAAGGAGAAGCGTATGAACCGCAATGTACTGTGGAAAATGCAGCTTCGTAT
AATGGTGGATTGATGAAGAAATATAATTCCGGGATCGGTACGCCATTGATGCCGCACAGG
AAGATCGAGACCTACATTTTTTCATTGTTCAATGAGAACACCAAACCCGGATCCATCGCT
GAGAGGAACTTCGGGTTGTTCCGACCCGATTTCACTCCGGTTTATGATGTCGGAGTTTTG
AAAAGCAACCAGGCTCACCCAACACCTTCATTGCCCCCACCAAAAACCGGTGGCGGAGGC
AATAAAGGTCAACCAAAAACACCAGCAGAGAACAAAAAATTCTGCATGCCAAAGGTTGAG
GCAACTGATGCACAACTACAATCCAACATTAACTATGTGTGCAGTCAGGGAGTTGACTGC
ACACCAATTCAAGTGGGTGGTTCCTGCTTTAAACCCAACACTATCCGATCTCACGCAGCC
TTTGCCATGAACTCGTACTATCAAAAGGAAGGTCGAAACAACTTCAATTGTGACTTTGCT
GGTACTGGTGTAGTCGCCTTCTCCGATCCAAGTTATGGAACATGCAAATTTGAATCTTGA

Peptide Sequence

PEP ID

Solyc07g005330.3.1
PEP Infomation

Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3 *** B9SXY3_RICCO)
Sequence

MISKTSFVLFLIAIALFLHDVTSIGVNYGTLGNNLPPPAQVAQFIKDKTVIDRVKIFDIN
PDILRAFANTGISLTVTVPNGEIPNLLDLAYARRYVEQNIKPHYPQTKMDVILVGNEVLH
WDTPEVQNKLVPAMKVFYQALGLSGLKGIKVSSAHSLGILLRSNPPSAARFRPGWDVGIL
APMLQFLRETKGPFMVNPYPYFGYNKKQEDFLLFRKNKGVYDRFSKKWYTNSFDMLLDAV
YMSMVRLKHSDVEIVAAETGWPSQGEAYEPQCTVENAASYNGGLMKKYNSGIGTPLMPHR
KIETYIFSLFNENTKPGSIAERNFGLFRPDFTPVYDVGVLKSNQAHPTPSLPPPKTGGGG
NKGQPKTPAENKKFCMPKVEATDAQLQSNINYVCSQGVDCTPIQVGGSCFKPNTIRSHAA
FAMNSYYQKEGRNNFNCDFAGTGVVAFSDPSYGTCKFES*

Transcript Sequence

Transcript ID

Solyc07g005330.3.1
Transcript Infomation

Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3 *** B9SXY3_RICCO)
Sequence

ATGATAAGCAAAACTTCTTTTGTGCTATTTCTCATTGCTATTGCTCTTTTTCTTCATGAT
GTAACTTCTATAGGTGTTAATTACGGGACTCTCGGAAACAACCTCCCTCCGCCAGCTCAA
GTGGCTCAGTTCATCAAGGATAAAACGGTCATAGACCGTGTAAAGATTTTCGATATCAAC
CCTGACATCCTCCGTGCTTTTGCAAACACAGGAATCTCGCTAACAGTCACAGTACCAAAC
GGCGAGATCCCGAATCTACTGGATCTCGCCTATGCTCGACGATACGTCGAGCAGAATATC
AAACCTCATTACCCACAGACAAAGATGGATGTTATTCTAGTGGGTAATGAGGTTCTTCAC
TGGGATACACCTGAGGTACAGAACAAGCTTGTTCCAGCTATGAAAGTTTTTTACCAAGCT
TTGGGTTTATCTGGGTTGAAGGGTATAAAAGTCTCTTCAGCTCATTCGTTGGGTATTCTA
CTCCGTTCTAACCCACCCAGTGCAGCCCGGTTTCGACCCGGTTGGGATGTGGGTATTCTA
GCTCCGATGCTACAATTTCTTCGTGAAACAAAAGGTCCTTTCATGGTAAATCCCTATCCC
TACTTCGGATACAACAAGAAACAAGAGGATTTTCTTCTATTTAGAAAGAATAAAGGGGTT
TACGATAGATTTTCGAAGAAATGGTATACGAATTCTTTTGATATGTTGTTGGATGCGGTG
TATATGTCGATGGTGAGATTGAAGCATTCAGATGTGGAGATTGTTGCTGCTGAGACAGGG
TGGCCTTCGCAAGGAGAAGCGTATGAACCGCAATGTACTGTGGAAAATGCAGCTTCGTAT
AATGGTGGATTGATGAAGAAATATAATTCCGGGATCGGTACGCCATTGATGCCGCACAGG
AAGATCGAGACCTACATTTTTTCATTGTTCAATGAGAACACCAAACCCGGATCCATCGCT
GAGAGGAACTTCGGGTTGTTCCGACCCGATTTCACTCCGGTTTATGATGTCGGAGTTTTG
AAAAGCAACCAGGCTCACCCAACACCTTCATTGCCCCCACCAAAAACCGGTGGCGGAGGC
AATAAAGGTCAACCAAAAACACCAGCAGAGAACAAAAAATTCTGCATGCCAAAGGTTGAG
GCAACTGATGCACAACTACAATCCAACATTAACTATGTGTGCAGTCAGGGAGTTGACTGC
ACACCAATTCAAGTGGGTGGTTCCTGCTTTAAACCCAACACTATCCGATCTCACGCAGCC
TTTGCCATGAACTCGTACTATCAAAAGGAAGGTCGAAACAACTTCAATTGTGACTTTGCT
GGTACTGGTGTAGTCGCCTTCTCCGATCCAAGTTATGGAACATGCAAATTTGAATCTTGA
ATGTACGTGAAGCTAAGGATGATAGCTAGTATTGACTTGTAATATTTATGAATGTTATGT
ACTTTGGTTTCACATATATAATCTAATTGTATTGGTTTGGTATGTAAACGTTCTTTTTAT
ATACTATGTCATTTAATGTGCCTCATTTATTAATTTCTCTTTTCCATTTGTTTTCAATTT
TATCAAGTCATCTTAAATATAGAAA