Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc07g005320.3.1
CDS Infomation	Pre-mRNA polyadenylation factor Fip1 (AHRD V3.3 *** A0A103XMV0_CYNCS)
Sequence	ATGGAGGACGACGATGAATTCGGAGATCTCTACACCGATGTACTCCGCCCCTTAACGGCG TCGTTTCAGTCTCAGCAGCAGCCGGTAGCGCAAGAAGAAGCTGCGCCCAAAGCCGCCGGG GCTACGAGCCGGCCGATCGATCTGAACATCAACAGCGATGATGAGGAGATTTTATACGGA GCTCCGAATTCGAATTCGAAACCGAATTTTGCTGGGCCGAGTGCTATTACTGGTCAGGAA AAAACCCTAGCTTCTCCGCTAGATGTTAAATCCGGGTCGAGGTTACCCGAATCCAATCTG TATTTAAAACTTGGAGCTGGAAGAATGGAGGGTTTGGGTGGAATTAATGAATCGGATTCG ACAGCTAGGGTTTTGGTTGAGAGTGAGGATGTGAAATTAGCTAAAACGGAGTTTCAAGAT TTGAATTTTATGGATGAAGCTAATATTGATATTGTAGTGGAAGAGACGGATGATAAAGAT GATATTTTGGTGGGGAATCATCAAAACGTAGGTGAAGACCATGAGAATCTGAAGGATGGG ACTGGAAATGCAGGGAATTTCGTGATTGAAGCTTCTGGTGCCGAGCAGTTGATTCCTGGG CTGGCGATTCCGGGTGTTTCAGGTGGGGCGGGGAATACTGGAGAAGGTACTTTTGAGGAT GATTGGGATAGTGATAGTGAGGATGATTTGCAGATTGTGTTAAATGACAACACTCATGGA CCAATGGGCATGGAGAGAATGGGTATTGGTGAAGAGGACGATGAAGATGAAGATCCTTTG GTTATTGTTGCTGATAATGATGGCCCAAGCCATCCACCAATGATGGAGGAGCAAGATTGG GGTGAAGAGGGGGGTCCTGCCGCTAATGGAGAGAGAAAGGAGATATTAGATGCACTAAAA GTGAATGGAGCACCTGGAGTAGCAGGAAAGGTTGGGTACCCCAATCATGCATACAATCAT CCGTATCATTCCCAGTATAAGTATGTGAGGCCTGGTGCAGCTCCTATGCCTGGAGTTCCC CCGTCGGGTCCTGGAGGGATACCTGGTCAAGTCCGCCCCCCTGTCAATGTAGGCCCTGTA GCTGGACGTGGTAGAGGTGATTGGAGACCACCAGGAATGAAAGGTGGCTATGGTATGTCT GGCTGGGGAGGTGGTGCGTCTGGACGTGGCCTTGGGATTGGGCTGGAATTCACTCTTCCT TCACACAAGACTATATTTGAAGTTGACATTGACGGTTTTGAAGAGAAACCTTGGAGACTT CCAGGCATTGATATAACAGATTTTTTTAACTTCGGTTTGAATGAGGATGGCTGGAAAGAT TATTGCAAGCAGCTGGAACAACTTCGACTTGAGTCAACTATGCAAGGAAGAATTCGGGTG TATGAAACTGTGAGGACAGAGCAGGAATATGATCCAGAAATGCCCCCAGAACTTGCAGCA GCAGCTGGTATGAAAGACATTCCATCGGAAAATTTGAATGGTAAAATTGATGGAACTACA AATGACCTAGGAAGAGGATCAATGCGCATGAGACCACCACTACCCACTGGAAGACCGATA CAAGTTGAAACTGGTTCTGGTGATCGCCTACCATCAATTGATAACCGACCACCACGACAG CGTGACTCGGATGCAATTATTGAAATTGTGTGCCAGGATGATGACCAATACACAGGGAAT GACAAGAATGAAGGGCAATTGGACAATATTCCTTCAACAGAGGATTTTAGAGGTGATGCA AGAAGAGGACCCCTGCAGGAACATGTTCAAGAATCTGATGGTTTTCAGAATCCTTATAAG AGCCACAGGCGAGAGGCCAATGCTAGGAGAACACAGTTTATAAACCCTATAGGTGATCAT TTAACCAAAGGAGATGGAGTGGTTCCTTTCTCCCCGGAGGCTCCTGATCAGTTTGTTTCT GATTCTGGAGGACAGACTTCTGCATATGACAACAAGAATTGTGTTTCTAAACAAGAGGAA AGGGGAAAAACGGTAAGTGCACACGATAGATCACCTGACATTACTTCCAGCAATAGCAGA GATAGACTCCAAGTTGATAGTCAGAAGGAAGAATCATTTGAAAGTGTTGATCGTACACAC ACTCCTGTCCCTTCTTCTCCCACTGCTGATAGACCTGCTCAGGAGCAAGATATGGAAGAT AGAGATGATATTCCTGATCAAGTTGTTGGAGCAGACACAAACAGTGAAGTTGACGGGGAG GAAATGACTTTGGATGCAAGAACTGATAGTGAAGCCATGAATGATGAATTTCTACATTCT GCAAAAAAGCAGAAGTTAAGTTCACGACATGAACAGTCTTCTCCTCAAGAAACTGATGAT GGAGAAGACTCCAAGGCTGGAAGAAGTAGTGAGAATAGCAAAGTCCAATCTGGAAGTAGT CGAGGTTATCGCAAGTTACGGGATGATATGGATGAGGAAGTTGTTCAAGGTAGACGCTCT TTGCGCGTAGATAATGCCAAAAAAACAGTTGCCAGAGATGAGGATAGAGTTCGAAAGAAA GCCCGCTATGAGAAAGAAGCAGAAAAGCACTCTGGGGTAGTGAAAGGGAGGGAAGATTCT TATCCCCGTAAAGGCGCCGACTCTAGTTCAGCCCATTACGTTGACCGGCGAAGGGAACGC GAATATTCAGAGGGATTATGGCAAAGAAGGGATGACGATCTACAGGGAAGGAGAGCAAAA ATGGAAGAACCACGAAAGAGGGAGCTTATTGATGAAATTGGAATTAGACACCGCAGCAAG GCTCGAGAATTTGAGGGAAGTGATAGAGAAGAACGCCATTTATACAGAAAACAGCTGGAG AACGTTACTTTAAGGCCTGATTATGATAAGGATATGGGAGCAAGGCATAGAGAGAGGGAT GAGTTGAAGAGGTACGATACCTTGGATGATCGCCACAATAAAAGAAGGAAAGAAGAGGTG AAATTAAGTAGGGAACACATTGACAAGGAAGAAACATTCCATTCCCATGGAGAAACTATG GTTCGCAGAAAGCGAGAGAGAGATGATGCCTCAGATCACCGAAAGAGAGATGAGCTGATG AGACTACGAGAAGATGAGCAGCTCTATATCAGGCACAAAGAAGATGGAGTGTTTCAGAGG GAGAGGAATGATAGACAGCGAGAACGTGAGGAGTGGTATAGGCTCAAACAGTCACATGAA GAGACACTACCAAAAAGGGAGAGAGAAGAAATAAGGGGCGGGATGCGGGCTGGACGTGTT CCGGAAGAAAAAGCTTGGGCTGCTCAATCTAGAGGGAAAGATGAGTATAGAAACTCTGAT CAGCACTCGAAAGATGTGAGGCATGCTGACCATATTAGAAGGAGGGATCGTGTTGAAAAT GAAAGTCCATCGAGGCTGAGGACACGTGAGGATGAAAGAAGAGCAAGGCATGACAGGGTG AACTCACGTGAAGATCGTGCTCCTATTGCTTCAGATAACTCCAGGGTTAATGAGAAAAGA CATAAAGATTATTTGAAGAAGGGTAAAGAATTTGAGAGTGATCACAACTCCCAGATGGCT TTGAACATGAACGAAGATGAACTGAATGGACAGAAAAATGAGTTGGTGAGCTCAAAGGGA AAATTTGTGCAAGGAACCAATGACAACAAGATCCACAGGAATCGCCAATCCTCCAAGAAA CATCAGGAAGCAGCTTCATCAGACGATGAGCAGGAGGATTCCAGGAGGGGACGTTCCAAG CTGGAACGATGGACAAGCCACAAGGAAAGAGACTTTGGTATCAATGCTAAATCATCTTCC TTGAACATGAAAGACAGCAATGTACACAAGGGCACCGGTACTTCATTAGCTAACAAAAAT CAAGATGAAGCTTTAAAGATGGTCGAAGAAAATCAACAACCTGCAGCTAACTATAAAAAT GGAGGTGCCCCTGAGATTAATAGCCTAGAAACAAAGCCTGTGGAGGATAAACATTTGGAG ACAGTTGAGAAGTTGAAGAAGCGTAGTGAGCGCTTCAAGCTTCCAATGCCAAGTGAGAAA GAAGCTCCAGTAAGTAAAAAGGTGGAAGGTGATCCATTATCCTCAGTTCAAAGCGAAACC CCTCCAGATTCAGAGGTGAAGCCAGAGCGTCCAGCACGCAGGAGGAGATGGACAAGCAGT TAA

Peptide Sequence

PEP ID	Solyc07g005320.3.1
PEP Infomation	Pre-mRNA polyadenylation factor Fip1 (AHRD V3.3 *** A0A103XMV0_CYNCS)
Sequence	MEDDDEFGDLYTDVLRPLTASFQSQQQPVAQEEAAPKAAGATSRPIDLNINSDDEEILYG APNSNSKPNFAGPSAITGQEKTLASPLDVKSGSRLPESNLYLKLGAGRMEGLGGINESDS TARVLVESEDVKLAKTEFQDLNFMDEANIDIVVEETDDKDDILVGNHQNVGEDHENLKDG TGNAGNFVIEASGAEQLIPGLAIPGVSGGAGNTGEGTFEDDWDSDSEDDLQIVLNDNTHG PMGMERMGIGEEDDEDEDPLVIVADNDGPSHPPMMEEQDWGEEGGPAANGERKEILDALK VNGAPGVAGKVGYPNHAYNHPYHSQYKYVRPGAAPMPGVPPSGPGGIPGQVRPPVNVGPV AGRGRGDWRPPGMKGGYGMSGWGGGASGRGLGIGLEFTLPSHKTIFEVDIDGFEEKPWRL PGIDITDFFNFGLNEDGWKDYCKQLEQLRLESTMQGRIRVYETVRTEQEYDPEMPPELAA AAGMKDIPSENLNGKIDGTTNDLGRGSMRMRPPLPTGRPIQVETGSGDRLPSIDNRPPRQ RDSDAIIEIVCQDDDQYTGNDKNEGQLDNIPSTEDFRGDARRGPLQEHVQESDGFQNPYK SHRREANARRTQFINPIGDHLTKGDGVVPFSPEAPDQFVSDSGGQTSAYDNKNCVSKQEE RGKTVSAHDRSPDITSSNSRDRLQVDSQKEESFESVDRTHTPVPSSPTADRPAQEQDMED RDDIPDQVVGADTNSEVDGEEMTLDARTDSEAMNDEFLHSAKKQKLSSRHEQSSPQETDD GEDSKAGRSSENSKVQSGSSRGYRKLRDDMDEEVVQGRRSLRVDNAKKTVARDEDRVRKK ARYEKEAEKHSGVVKGREDSYPRKGADSSSAHYVDRRREREYSEGLWQRRDDDLQGRRAK MEEPRKRELIDEIGIRHRSKAREFEGSDREERHLYRKQLENVTLRPDYDKDMGARHRERD ELKRYDTLDDRHNKRRKEEVKLSREHIDKEETFHSHGETMVRRKRERDDASDHRKRDELM RLREDEQLYIRHKEDGVFQRERNDRQREREEWYRLKQSHEETLPKREREEIRGGMRAGRV PEEKAWAAQSRGKDEYRNSDQHSKDVRHADHIRRRDRVENESPSRLRTREDERRARHDRV NSREDRAPIASDNSRVNEKRHKDYLKKGKEFESDHNSQMALNMNEDELNGQKNELVSSKG KFVQGTNDNKIHRNRQSSKKHQEAASSDDEQEDSRRGRSKLERWTSHKERDFGINAKSSS LNMKDSNVHKGTGTSLANKNQDEALKMVEENQQPAANYKNGGAPEINSLETKPVEDKHLE TVEKLKKRSERFKLPMPSEKEAPVSKKVEGDPLSSVQSETPPDSEVKPERPARRRRWTSS *

Transcript Sequence

Transcript ID	Solyc07g005320.3.1
Transcript Infomation	Pre-mRNA polyadenylation factor Fip1 (AHRD V3.3 *** A0A103XMV0_CYNCS)
Sequence	TTTGAAGAGCACAAATTTGTACCCTTCTAAGAAGCCCTCAAAACCCTCTCTTTATTGCGT CTTTCTCCGGAAGTACTCGCAGTTCTCTCTCTAATCGATAATGGAGGACGACGATGAATT CGGAGATCTCTACACCGATGTACTCCGCCCCTTAACGGCGTCGTTTCAGTCTCAGCAGCA GCCGGTAGCGCAAGAAGAAGCTGCGCCCAAAGCCGCCGGGGCTACGAGCCGGCCGATCGA TCTGAACATCAACAGCGATGATGAGGAGATTTTATACGGAGCTCCGAATTCGAATTCGAA ACCGAATTTTGCTGGGCCGAGTGCTATTACTGGTCAGGAAAAAACCCTAGCTTCTCCGCT AGATGTTAAATCCGGGTCGAGGTTACCCGAATCCAATCTGTATTTAAAACTTGGAGCTGG AAGAATGGAGGGTTTGGGTGGAATTAATGAATCGGATTCGACAGCTAGGGTTTTGGTTGA GAGTGAGGATGTGAAATTAGCTAAAACGGAGTTTCAAGATTTGAATTTTATGGATGAAGC TAATATTGATATTGTAGTGGAAGAGACGGATGATAAAGATGATATTTTGGTGGGGAATCA TCAAAACGTAGGTGAAGACCATGAGAATCTGAAGGATGGGACTGGAAATGCAGGGAATTT CGTGATTGAAGCTTCTGGTGCCGAGCAGTTGATTCCTGGGCTGGCGATTCCGGGTGTTTC AGGTGGGGCGGGGAATACTGGAGAAGGTACTTTTGAGGATGATTGGGATAGTGATAGTGA GGATGATTTGCAGATTGTGTTAAATGACAACACTCATGGACCAATGGGCATGGAGAGAAT GGGTATTGGTGAAGAGGACGATGAAGATGAAGATCCTTTGGTTATTGTTGCTGATAATGA TGGCCCAAGCCATCCACCAATGATGGAGGAGCAAGATTGGGGTGAAGAGGGGGGTCCTGC CGCTAATGGAGAGAGAAAGGAGATATTAGATGCACTAAAAGTGAATGGAGCACCTGGAGT AGCAGGAAAGGTTGGGTACCCCAATCATGCATACAATCATCCGTATCATTCCCAGTATAA GTATGTGAGGCCTGGTGCAGCTCCTATGCCTGGAGTTCCCCCGTCGGGTCCTGGAGGGAT ACCTGGTCAAGTCCGCCCCCCTGTCAATGTAGGCCCTGTAGCTGGACGTGGTAGAGGTGA TTGGAGACCACCAGGAATGAAAGGTGGCTATGGTATGTCTGGCTGGGGAGGTGGTGCGTC TGGACGTGGCCTTGGGATTGGGCTGGAATTCACTCTTCCTTCACACAAGACTATATTTGA AGTTGACATTGACGGTTTTGAAGAGAAACCTTGGAGACTTCCAGGCATTGATATAACAGA TTTTTTTAACTTCGGTTTGAATGAGGATGGCTGGAAAGATTATTGCAAGCAGCTGGAACA ACTTCGACTTGAGTCAACTATGCAAGGAAGAATTCGGGTGTATGAAACTGTGAGGACAGA GCAGGAATATGATCCAGAAATGCCCCCAGAACTTGCAGCAGCAGCTGGTATGAAAGACAT TCCATCGGAAAATTTGAATGGTAAAATTGATGGAACTACAAATGACCTAGGAAGAGGATC AATGCGCATGAGACCACCACTACCCACTGGAAGACCGATACAAGTTGAAACTGGTTCTGG TGATCGCCTACCATCAATTGATAACCGACCACCACGACAGCGTGACTCGGATGCAATTAT TGAAATTGTGTGCCAGGATGATGACCAATACACAGGGAATGACAAGAATGAAGGGCAATT GGACAATATTCCTTCAACAGAGGATTTTAGAGGTGATGCAAGAAGAGGACCCCTGCAGGA ACATGTTCAAGAATCTGATGGTTTTCAGAATCCTTATAAGAGCCACAGGCGAGAGGCCAA TGCTAGGAGAACACAGTTTATAAACCCTATAGGTGATCATTTAACCAAAGGAGATGGAGT GGTTCCTTTCTCCCCGGAGGCTCCTGATCAGTTTGTTTCTGATTCTGGAGGACAGACTTC TGCATATGACAACAAGAATTGTGTTTCTAAACAAGAGGAAAGGGGAAAAACGGTAAGTGC ACACGATAGATCACCTGACATTACTTCCAGCAATAGCAGAGATAGACTCCAAGTTGATAG TCAGAAGGAAGAATCATTTGAAAGTGTTGATCGTACACACACTCCTGTCCCTTCTTCTCC CACTGCTGATAGACCTGCTCAGGAGCAAGATATGGAAGATAGAGATGATATTCCTGATCA AGTTGTTGGAGCAGACACAAACAGTGAAGTTGACGGGGAGGAAATGACTTTGGATGCAAG AACTGATAGTGAAGCCATGAATGATGAATTTCTACATTCTGCAAAAAAGCAGAAGTTAAG TTCACGACATGAACAGTCTTCTCCTCAAGAAACTGATGATGGAGAAGACTCCAAGGCTGG AAGAAGTAGTGAGAATAGCAAAGTCCAATCTGGAAGTAGTCGAGGTTATCGCAAGTTACG GGATGATATGGATGAGGAAGTTGTTCAAGGTAGACGCTCTTTGCGCGTAGATAATGCCAA AAAAACAGTTGCCAGAGATGAGGATAGAGTTCGAAAGAAAGCCCGCTATGAGAAAGAAGC AGAAAAGCACTCTGGGGTAGTGAAAGGGAGGGAAGATTCTTATCCCCGTAAAGGCGCCGA CTCTAGTTCAGCCCATTACGTTGACCGGCGAAGGGAACGCGAATATTCAGAGGGATTATG GCAAAGAAGGGATGACGATCTACAGGGAAGGAGAGCAAAAATGGAAGAACCACGAAAGAG GGAGCTTATTGATGAAATTGGAATTAGACACCGCAGCAAGGCTCGAGAATTTGAGGGAAG TGATAGAGAAGAACGCCATTTATACAGAAAACAGCTGGAGAACGTTACTTTAAGGCCTGA TTATGATAAGGATATGGGAGCAAGGCATAGAGAGAGGGATGAGTTGAAGAGGTACGATAC CTTGGATGATCGCCACAATAAAAGAAGGAAAGAAGAGGTGAAATTAAGTAGGGAACACAT TGACAAGGAAGAAACATTCCATTCCCATGGAGAAACTATGGTTCGCAGAAAGCGAGAGAG AGATGATGCCTCAGATCACCGAAAGAGAGATGAGCTGATGAGACTACGAGAAGATGAGCA GCTCTATATCAGGCACAAAGAAGATGGAGTGTTTCAGAGGGAGAGGAATGATAGACAGCG AGAACGTGAGGAGTGGTATAGGCTCAAACAGTCACATGAAGAGACACTACCAAAAAGGGA GAGAGAAGAAATAAGGGGCGGGATGCGGGCTGGACGTGTTCCGGAAGAAAAAGCTTGGGC TGCTCAATCTAGAGGGAAAGATGAGTATAGAAACTCTGATCAGCACTCGAAAGATGTGAG GCATGCTGACCATATTAGAAGGAGGGATCGTGTTGAAAATGAAAGTCCATCGAGGCTGAG GACACGTGAGGATGAAAGAAGAGCAAGGCATGACAGGGTGAACTCACGTGAAGATCGTGC TCCTATTGCTTCAGATAACTCCAGGGTTAATGAGAAAAGACATAAAGATTATTTGAAGAA GGGTAAAGAATTTGAGAGTGATCACAACTCCCAGATGGCTTTGAACATGAACGAAGATGA ACTGAATGGACAGAAAAATGAGTTGGTGAGCTCAAAGGGAAAATTTGTGCAAGGAACCAA TGACAACAAGATCCACAGGAATCGCCAATCCTCCAAGAAACATCAGGAAGCAGCTTCATC AGACGATGAGCAGGAGGATTCCAGGAGGGGACGTTCCAAGCTGGAACGATGGACAAGCCA CAAGGAAAGAGACTTTGGTATCAATGCTAAATCATCTTCCTTGAACATGAAAGACAGCAA TGTACACAAGGGCACCGGTACTTCATTAGCTAACAAAAATCAAGATGAAGCTTTAAAGAT GGTCGAAGAAAATCAACAACCTGCAGCTAACTATAAAAATGGAGGTGCCCCTGAGATTAA TAGCCTAGAAACAAAGCCTGTGGAGGATAAACATTTGGAGACAGTTGAGAAGTTGAAGAA GCGTAGTGAGCGCTTCAAGCTTCCAATGCCAAGTGAGAAAGAAGCTCCAGTAAGTAAAAA GGTGGAAGGTGATCCATTATCCTCAGTTCAAAGCGAAACCCCTCCAGATTCAGAGGTGAA GCCAGAGCGTCCAGCACGCAGGAGGAGATGGACAAGCAGTTAAATGAGGAATTCAAGGAA CATCTTTGTTTGATGGCTTATTTCCTACTCATGGAGTATATGCCCTCCTTGGCTAATGTT TTACCAATGTGCTTGTCAACTTAAGGAAGCCTGTACTGCTGTTGTCTATTCTGGATCTGA GGTTTGTGTAGACCTCCCATAGTAGATTTGGGTATCTGTAACCATGTTCAGATTATCTAT TTGGTTTTCTTATTTCTGTAATACATGTATATACCAGTAAGCCTAACATCATAGTGGCCC ATTGTTGGGGTGCCAGAATTGCATTTTTGGGTATTAAATGACATTGCATTATAGTGTATG AGTAGTAGTAGTAAACACTGTATTCGAGAACCATAGTTAGCGACTATGGCTGATAGCTAT GCCCTCCATGTTCTTCTTCCTTGAAGGCCAATCCCTGCAAGGAGTCTTGTGTGTTTGCTG TCACTTTTTTTGGACTATGAACTTCAGGAATCAAAACTCAAAGATGAAGGGAACATGGAC GAGAAGCAAATTTCAGGAGAATCTGGAACTAGGAAACAGGGACCGTGTAGTACATATCGC GGTAAACTGCTTTGTCTCTTGGAAAATTTATATGTTTTGCTGGAGCACAAAGTCAGAACG CGATTTTTGTATGTTGTGCTAGAGAAAAATGTCTGAATTACAGAAATTACAACAGAGGAG AAGATCTCTTTACCACGCAGATGTTCTCTATTCTCTTGTAGCTTTTTCGTTGTTTTTTTT