Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g084620.1.1
CDS Infomation	Pectinesterase (AHRD V3.3 *** K4CAW7_SOLLC)
Sequence	ATGGTGGGGAAAATCGTGGTTTCTTTGGTATCATTGTTTCTTGTGGTGGGTGTTGTATTG GGAGTGGCGATCGTTGTGCACAAAGGGTCAAAAGATCATGCAGGACAAAATCCTAAAGTC CAAATGAAGGCATCGATTGTGGAGTTCTGTAAACCTGCAGAATTCGAAATAGCTTGTTTT AAGAGCCTTGATGCAGTGTCTAAGAACGATAGTGCTACGATGAAAGACTACCTGTTGGCT TCGTTGCAAGTGACAGGGGATGAAATAAAGAAATCTTTAGCGGTTGTGGAGAAGGGTAAT CCTATTGATAATAAAACGGATCCGTACAATCACATGGCAGTAGAGGATTGCAAAGAGCTG TTGCAATATGCTGTGGAGGAACTCCACGACTCCTACTCTATGGTTGGGGATACCGCATTG CATTCCCTTGGTGATCGTGTGAGCGAACTATTGAACTGGCTCGGTGCGGTCTACTCCTAT CAAAGCATGTGTCTCGATGGTATAATTGATAAGCCTGATTACAAACAAGTCTTAGAAAAT GGCATGCGAAATGCAACCCAACTCACACACAATGCAATTAACATTGTAGCAAAGATTTCA AACGTCCTCCAAGACGCTTTCAACATCTCAAGCACCATTCCATCAACATCTAGTCATCGT CGCCTCCTTGCTAATTACCCTACCTGGTTCCCTGTTGCCGACCGTAAGCTTTTAGCTGGA GGTGGACGACATAGGGCAGCTCCTCATGCAGTGGTCGCCAAGGATGGCACTGGTCAGTAC AACACCGTCGCTGCTGCGTTAGCTGCCTATCCTAAAAACCATAGAGGCAAATACATAGTG TATGTTAAAGCTGGTATCTATGAGGAGCAAGTCATCATCTCCAAGAAGCAACCAAACGTC TTCATCTATGGCGATGGAGCAGGGAAAACCATTATTACTGGACATAGAAACTTTGGTATC ATGAAAATACCCACCCAAGACACTGCTACTTTTGCTGTTCTTGGCAATGGGTTCGTTGCA AGGGGAATTACCTTCCGCAACACTGCTGGTCCACAAGGTCACCAAGCTGTGGCTCTTCGA ATTAACGGTGATATGGCTGCTGTTTTTGACTGCAGCATTGAAGGTTATCAAGACACCTTG TACTATCAAAACCATCGCCAATTTTACCGCAACTGTGTCATCTCTGGTACGATAGATTTC ATATTTGGAAGGGGGTCAGCAGTAATCCAAAACAGTTTGATCATAGCGAGGAGACCTTTG GACAGCCAGTTCAACACCATCACCGCTGATGGCAAAGAAATAGCAAACAAACCAGGTGGT TTGGTGTTCCAGAACTGCAGAATCGTTCCAGAAATGGAATTGTTTGCAGATAGGTTCAAG CTGGCATCATACTTGGGGCGTCCCTGGAAGCCTTATGCAACCACTGTATTCATGGAGAGC GAATTGGGTGATTTCATCCGCCCAGAAGGTTGGATGATATGGCAAGGAGAATCATTCGAG CGGACATGTAATTACTACGAGTTTGCCAACCGCGGACCCGGTGCAAACATCAATAACAGG AACAAGAGCTTCAAGAACTTCCGTCTTATTAACCCACTTGAAGCGGTTCAATACACAGTC GACCGCTGGATTAATGGATATCTTTGGTTGAAGCACACTGGTGCACCTTTTTACCTTGGC CTTGGAGGAAGATAA

Peptide Sequence

PEP ID	Solyc06g084620.1.1
PEP Infomation	Pectinesterase (AHRD V3.3 *** K4CAW7_SOLLC)
Sequence	MVGKIVVSLVSLFLVVGVVLGVAIVVHKGSKDHAGQNPKVQMKASIVEFCKPAEFEIACF KSLDAVSKNDSATMKDYLLASLQVTGDEIKKSLAVVEKGNPIDNKTDPYNHMAVEDCKEL LQYAVEELHDSYSMVGDTALHSLGDRVSELLNWLGAVYSYQSMCLDGIIDKPDYKQVLEN GMRNATQLTHNAINIVAKISNVLQDAFNISSTIPSTSSHRRLLANYPTWFPVADRKLLAG GGRHRAAPHAVVAKDGTGQYNTVAAALAAYPKNHRGKYIVYVKAGIYEEQVIISKKQPNV FIYGDGAGKTIITGHRNFGIMKIPTQDTATFAVLGNGFVARGITFRNTAGPQGHQAVALR INGDMAAVFDCSIEGYQDTLYYQNHRQFYRNCVISGTIDFIFGRGSAVIQNSLIIARRPL DSQFNTITADGKEIANKPGGLVFQNCRIVPEMELFADRFKLASYLGRPWKPYATTVFMES ELGDFIRPEGWMIWQGESFERTCNYYEFANRGPGANINNRNKSFKNFRLINPLEAVQYTV DRWINGYLWLKHTGAPFYLGLGGR*

Transcript Sequence

Transcript ID	Solyc06g084620.1.1
Transcript Infomation	Pectinesterase (AHRD V3.3 *** K4CAW7_SOLLC)
Sequence	ATGGTGGGGAAAATCGTGGTTTCTTTGGTATCATTGTTTCTTGTGGTGGGTGTTGTATTG GGAGTGGCGATCGTTGTGCACAAAGGGTCAAAAGATCATGCAGGACAAAATCCTAAAGTC CAAATGAAGGCATCGATTGTGGAGTTCTGTAAACCTGCAGAATTCGAAATAGCTTGTTTT AAGAGCCTTGATGCAGTGTCTAAGAACGATAGTGCTACGATGAAAGACTACCTGTTGGCT TCGTTGCAAGTGACAGGGGATGAAATAAAGAAATCTTTAGCGGTTGTGGAGAAGGGTAAT CCTATTGATAATAAAACGGATCCGTACAATCACATGGCAGTAGAGGATTGCAAAGAGCTG TTGCAATATGCTGTGGAGGAACTCCACGACTCCTACTCTATGGTTGGGGATACCGCATTG CATTCCCTTGGTGATCGTGTGAGCGAACTATTGAACTGGCTCGGTGCGGTCTACTCCTAT CAAAGCATGTGTCTCGATGGTATAATTGATAAGCCTGATTACAAACAAGTCTTAGAAAAT GGCATGCGAAATGCAACCCAACTCACACACAATGCAATTAACATTGTAGCAAAGATTTCA AACGTCCTCCAAGACGCTTTCAACATCTCAAGCACCATTCCATCAACATCTAGTCATCGT CGCCTCCTTGCTAATTACCCTACCTGGTTCCCTGTTGCCGACCGTAAGCTTTTAGCTGGA GGTGGACGACATAGGGCAGCTCCTCATGCAGTGGTCGCCAAGGATGGCACTGGTCAGTAC AACACCGTCGCTGCTGCGTTAGCTGCCTATCCTAAAAACCATAGAGGCAAATACATAGTG TATGTTAAAGCTGGTATCTATGAGGAGCAAGTCATCATCTCCAAGAAGCAACCAAACGTC TTCATCTATGGCGATGGAGCAGGGAAAACCATTATTACTGGACATAGAAACTTTGGTATC ATGAAAATACCCACCCAAGACACTGCTACTTTTGCTGTTCTTGGCAATGGGTTCGTTGCA AGGGGAATTACCTTCCGCAACACTGCTGGTCCACAAGGTCACCAAGCTGTGGCTCTTCGA ATTAACGGTGATATGGCTGCTGTTTTTGACTGCAGCATTGAAGGTTATCAAGACACCTTG TACTATCAAAACCATCGCCAATTTTACCGCAACTGTGTCATCTCTGGTACGATAGATTTC ATATTTGGAAGGGGGTCAGCAGTAATCCAAAACAGTTTGATCATAGCGAGGAGACCTTTG GACAGCCAGTTCAACACCATCACCGCTGATGGCAAAGAAATAGCAAACAAACCAGGTGGT TTGGTGTTCCAGAACTGCAGAATCGTTCCAGAAATGGAATTGTTTGCAGATAGGTTCAAG CTGGCATCATACTTGGGGCGTCCCTGGAAGCCTTATGCAACCACTGTATTCATGGAGAGC GAATTGGGTGATTTCATCCGCCCAGAAGGTTGGATGATATGGCAAGGAGAATCATTCGAG CGGACATGTAATTACTACGAGTTTGCCAACCGCGGACCCGGTGCAAACATCAATAACAGG AACAAGAGCTTCAAGAACTTCCGTCTTATTAACCCACTTGAAGCGGTTCAATACACAGTC GACCGCTGGATTAATGGATATCTTTGGTTGAAGCACACTGGTGCACCTTTTTACCTTGGC CTTGGAGGAAGATAA