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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g084615.1.1
CDS Infomation

beta-carotene isomerase D27 (AHRD V3.3 *** AT4G01995.1)
Sequence

ATGGCTATGGTTCCTCTATCCTCGCCCCTCTTCGCTTGGCCCAAAGTTTACCATGGAAAA
AGCGGTATTCGGGTTTCGTGTTTCTCAAACAGTACATCAGAACCTATTGAAGCAAGAAAG
CCCAAGGTGTTTGATAATCTGTTCCTTAGTTTATTCCGGAACAAAATGGTCCAGGAGACA
GGATGGGACTCCGAAAAGCCGGGGTACCAGGGTCTAATTGAAGTGGCGCATCGTCTGACG
GTTAGTCAAGACAATTCCAAAACTAGAGACGCATCGGTTCGTATATTGAAATCATTATTT
CCTCCTTTGTTGTTGGAGCTCTACCGGATGCTTATTGCACCTATACATAGTGGTAAATTT
GCAGCCTTGATGGTCGCAAGGGTGACTGCATTATCTTGCCAATGGCTTATGGGTCCATGT
ACTGTTAATTCCGTACATCTTCCAAATGGTTCCTCATTGATGAGTGGGGTTTTTGTGGAG
AAATGCAAGTATTTGGAAGAGAGCAAATGTGTGGGTGTATGTATTAATACATGTAAACTC
CCTACACAGACTTTCTTCAAGGATCACATGGGAGTTCCATTGCTGATGGAGCCAAACTTC
ATTGATTATAGTTGTCAGTTTAAATTTGGGATTCTTCCTCCTCAGCAAGAAGTGGACGAT
GCTCTTAAAGAGCCATGCTTAGAGATATGCCCCAGTTCTGTTCGTCGAAATGAAATGAAC
CACAACATGGATGCACACAAGTGTCCAAAAGCATGA

Peptide Sequence

PEP ID

Solyc06g084615.1.1
PEP Infomation

beta-carotene isomerase D27 (AHRD V3.3 *** AT4G01995.1)
Sequence

MAMVPLSSPLFAWPKVYHGKSGIRVSCFSNSTSEPIEARKPKVFDNLFLSLFRNKMVQET
GWDSEKPGYQGLIEVAHRLTVSQDNSKTRDASVRILKSLFPPLLLELYRMLIAPIHSGKF
AALMVARVTALSCQWLMGPCTVNSVHLPNGSSLMSGVFVEKCKYLEESKCVGVCINTCKL
PTQTFFKDHMGVPLLMEPNFIDYSCQFKFGILPPQQEVDDALKEPCLEICPSSVRRNEMN
HNMDAHKCPKA*

Transcript Sequence

Transcript ID

Solyc06g084615.1.1
Transcript Infomation

beta-carotene isomerase D27 (AHRD V3.3 *** AT4G01995.1)
Sequence

ACTAAATAAGTACTGCTACTTAAAATCGCTATGATTTGAATCATATAAATACATTTGCTT
TAATTCTAACGTTAATGTATAATTAATGGAGTGAGAAAAAAAAATTATCATTATAATGAT
TGGACAACCGCGAAAGGAAGGAAGATAGAAGGGATTGGAAGTCCGGTGATGGCTATGGTT
CCTCTATCCTCGCCCCTCTTCGCTTGGCCCAAAGTTTACCATGGAAAAAGCGGTATTCGG
GTTTCGTGTTTCTCAAACAGTACATCAGAACCTATTGAAGCAAGAAAGCCCAAGGTGTTT
GATAATCTGTTCCTTAGTTTATTCCGGAACAAAATGGTCCAGGAGACAGGATGGGACTCC
GAAAAGCCGGGGTACCAGGGTCTAATTGAAGTGGCGCATCGTCTGACGGTTAGTCAAGAC
AATTCCAAAACTAGAGACGCATCGGTTCGTATATTGAAATCATTATTTCCTCCTTTGTTG
TTGGAGCTCTACCGGATGCTTATTGCACCTATACATAGTGGTAAATTTGCAGCCTTGATG
GTCGCAAGGGTGACTGCATTATCTTGCCAATGGCTTATGGGTCCATGTACTGTTAATTCC
GTACATCTTCCAAATGGTTCCTCATTGATGAGTGGGGTTTTTGTGGAGAAATGCAAGTAT
TTGGAAGAGAGCAAATGTGTGGGTGTATGTATTAATACATGTAAACTCCCTACACAGACT
TTCTTCAAGGATCACATGGGAGTTCCATTGCTGATGGAGCCAAACTTCATTGATTATAGT
TGTCAGTTTAAATTTGGGATTCTTCCTCCTCAGCAAGAAGTGGACGATGCTCTTAAAGAG
CCATGCTTAGAGATATGCCCCAGTTCTGTTCGTCGAAATGAAATGAACCACAACATGGAT
GCACACAAGTGTCCAAAAGCATGAAATCTGCTCATTCTGTTAATATCTTAATGATCCTGC
CATTATAATACTATCTTGGGGGAGGGCTAAGGCAAATTAATTAATAAATATCAAAGAATG
ACGGAAGGCGTGGTCGCCATCAAGGACAACAGAAATGACGATCAGAATAAGAAGAAGGCG
AAGCCACCAGGCGTTTTCGGCTTCTTCAAAGCTGCAATGTTCGTATTGCGCCATCGAACA
AAAGGAAAGCAGAAAGCTGCTCAGGTAATAACCCAACAGGGAGATTGGAAGAAGCTGTGA
GCCAGTACGCTTCTGCTGACGATCTCAAATCACTAGATCAGTTGGATACCATGAGCCAAT
ACGCTTCAGCAAACGATCTGAAATCACTAGATGACCAGGCCTCGGCCTCAGCCTCATCGG
AGACCATGAGCCAGTACGCTTCCGCAAGCAATCTCCAAGACCTCGACGAACAGGAGGAAG
ATGAAGATGACCCTGACAAAGTCTTCGATGCTATTGGCGCTGATGACATGATCGATGCCA
AGGCCGAGCTCTTCATCCTTCAGTTTTACCAACAAATGAGGCGTCAAAACGTTGATTCAA
TCAATGGCCAATTCCATTAATTGCAAGGTCAACATTACGTAATAAATAAGGCCAAGGCCA
GATAGCCCATTATTGTCTAGCTAATTATATAGTATATGATGGATGAGAAGTACATTGATG
ATGAAGCCAACCTATATACTGTATCATATATAACAAGACAAAGGGAACGTAACAATCATG
AATATATATAACATTCTGGCCAGCCTTCTGCTTCAATTTCTTTTTTTATTCCTAAAACAT
AGTACT