Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g084380.3.1
CDS Infomation

2OG-Fe(II) oxygenase family oxidoreductase (AHRD V3.3 *** A0A072VPE6_MEDTR)
Sequence

ATGCCGCCAGCTGCCGACGTTGTTGGACATCACCGTGTAGTACCCTTAGATTCTAAGGTT
ACGCCGACGGCCTCCATGGTATCGGAGACATTTGCTAAGGACGCAATATTAGCGTGGTTC
AGGGGAGAGTTTGCTGCTGCAAATGCGATTATAGATGCGCTTTGCAACCATATAACTCAG
CTTGAGGGAGGAAGAGCAGAGCATGAATCGGTGTTTGCAGCCATCCACCGCCGGAGGCTG
AATTGGATCCCAATTCTACAGATGCAAAAGTACTGTTCCATTGCCGAGGTTACACTCGAT
CTACGTAAAGTCGCTGATAGAAAGATCAAGGAGAGAGAGGAGTTTGCAATCTCCAAACAG
TTCGATAACCAGGCAATCACTCCTGAAATAGTGGATGGAGATGATTCTCCTGAAACTGAC
ATCACTCATGATACAGGACTCTTAATACAACACTTGGAAGAAAGTGTTGAATTCTGCTCA
AACCATGAGAACTGTGAGGCAAGGCATGCCCACATCAAGATGACAAAGGGGTTTGTGTCG
AAAGAGCTAGTCAAAGGGCATATGGTGAATGTAGTGCGAGGTCTCAAGTTATTCGAAGAC
ATATTTACTCCAAATGAAATCTCTAAACTAAATGATTTAGTGGACGAACTTCGTGTTGCT
GGCCAGAATGGTGAAACTTTTATTTTATTCAACCAGCAAGTGAAGGGCAACAAAAGAGAG
ATGATTCAGCTTGGGACCCCAATTTTCGGACACATAAAAGAGGAGGCCATGTGTCAAAAG
AGTAACATTGAACCCATTCCAGCTCTTCTACAAGGTGTCATAGACCACCTGATTCAGTGG
AATCTAATATCAGAAAGTAGAAGGCCTAACAGCTGTGTAATCAACTATTTTGATGAGGGG
GAGTATTCACAACCTTTCATGAAACCACCACATTTGGACCAGCCGGTGTCTACCCTTCTC
CTCTCTGAATCAATGATGGCATTTGGTAGAGCTCTTGTGAGTGATAGTGATGGGAACTAC
AAAGGATCATTCATGCTTTCTCTTAAACAAGGCAAGTCTTTCTCATTAACATGGGAGATT
GCAATTCCTCCATTCCCCGGTGAAAGTAAGGCCATGCTAGTGTCTCTTTTAGTCATGAGA
GGAAACAGTGCCGATATGGCTAGACATGCACTGTGCTCATCAGCTAGCAAAAGAGTTGCT
ATTACATTCTTCAAAGTAAGAACAGAGATGAATAACTTCGTCTCGGATCAAAAAATCCCC
CCTCTGACTAAAGCAATGACCTTATGGCAGCCTGGTGTCCCAACACATTATTCAACTGCA
AATGGAGCAGCTAATGGTTATAAGATTATGGATGTGATGCCTAAATGGGGTTTCCTTCGA
GCTCCAGAATTTATGGTAGCTCCTGTGCATCCGATGGTTCTAAGCCCTCGAAAAATTCCA
ACTGGTGGTACTGGTGTCTTTCTTCCATTATCAAGAAAACCTGCAAAACATATTCCACCA
CGTGCCCAGAAAAGGCGGTTTCTTGAGCTACCTTCCCCTAGTGGGTCGCCTAAATCAGTG
AGCAGTTCAGAAGCAAGTACGGCTGTTTAG

Peptide Sequence

PEP ID

Solyc06g084380.3.1
PEP Infomation

2OG-Fe(II) oxygenase family oxidoreductase (AHRD V3.3 *** A0A072VPE6_MEDTR)
Sequence

MPPAADVVGHHRVVPLDSKVTPTASMVSETFAKDAILAWFRGEFAAANAIIDALCNHITQ
LEGGRAEHESVFAAIHRRRLNWIPILQMQKYCSIAEVTLDLRKVADRKIKEREEFAISKQ
FDNQAITPEIVDGDDSPETDITHDTGLLIQHLEESVEFCSNHENCEARHAHIKMTKGFVS
KELVKGHMVNVVRGLKLFEDIFTPNEISKLNDLVDELRVAGQNGETFILFNQQVKGNKRE
MIQLGTPIFGHIKEEAMCQKSNIEPIPALLQGVIDHLIQWNLISESRRPNSCVINYFDEG
EYSQPFMKPPHLDQPVSTLLLSESMMAFGRALVSDSDGNYKGSFMLSLKQGKSFSLTWEI
AIPPFPGESKAMLVSLLVMRGNSADMARHALCSSASKRVAITFFKVRTEMNNFVSDQKIP
PLTKAMTLWQPGVPTHYSTANGAANGYKIMDVMPKWGFLRAPEFMVAPVHPMVLSPRKIP
TGGTGVFLPLSRKPAKHIPPRAQKRRFLELPSPSGSPKSVSSSEASTAV*

Transcript Sequence

Transcript ID

Solyc06g084380.3.1
Transcript Infomation

2OG-Fe(II) oxygenase family oxidoreductase (AHRD V3.3 *** A0A072VPE6_MEDTR)
Sequence

AACAGCTTTGGCACATTAGATTTTTTTAGAGAGAAGAGATTATTACGGAGTCTTTAACCA
GCTAAAACTTCATTGTTCCGATATGCCGCCAGCTGCCGACGTTGTTGGACATCACCGTGT
AGTACCCTTAGATTCTAAGGTTACGCCGACGGCCTCCATGGTATCGGAGACATTTGCTAA
GGACGCAATATTAGCGTGGTTCAGGGGAGAGTTTGCTGCTGCAAATGCGATTATAGATGC
GCTTTGCAACCATATAACTCAGCTTGAGGGAGGAAGAGCAGAGCATGAATCGGTGTTTGC
AGCCATCCACCGCCGGAGGCTGAATTGGATCCCAATTCTACAGATGCAAAAGTACTGTTC
CATTGCCGAGGTTACACTCGATCTACGTAAAGTCGCTGATAGAAAGATCAAGGAGAGAGA
GGAGTTTGCAATCTCCAAACAGTTCGATAACCAGGCAATCACTCCTGAAATAGTGGATGG
AGATGATTCTCCTGAAACTGACATCACTCATGATACAGGACTCTTAATACAACACTTGGA
AGAAAGTGTTGAATTCTGCTCAAACCATGAGAACTGTGAGGCAAGGCATGCCCACATCAA
GATGACAAAGGGGTTTGTGTCGAAAGAGCTAGTCAAAGGGCATATGGTGAATGTAGTGCG
AGGTCTCAAGTTATTCGAAGACATATTTACTCCAAATGAAATCTCTAAACTAAATGATTT
AGTGGACGAACTTCGTGTTGCTGGCCAGAATGGTGAAACTTTTATTTTATTCAACCAGCA
AGTGAAGGGCAACAAAAGAGAGATGATTCAGCTTGGGACCCCAATTTTCGGACACATAAA
AGAGGAGGCCATGTGTCAAAAGAGTAACATTGAACCCATTCCAGCTCTTCTACAAGGTGT
CATAGACCACCTGATTCAGTGGAATCTAATATCAGAAAGTAGAAGGCCTAACAGCTGTGT
AATCAACTATTTTGATGAGGGGGAGTATTCACAACCTTTCATGAAACCACCACATTTGGA
CCAGCCGGTGTCTACCCTTCTCCTCTCTGAATCAATGATGGCATTTGGTAGAGCTCTTGT
GAGTGATAGTGATGGGAACTACAAAGGATCATTCATGCTTTCTCTTAAACAAGGCAAGTC
TTTCTCATTAACATGGGAGATTGCAATTCCTCCATTCCCCGGTGAAAGTAAGGCCATGCT
AGTGTCTCTTTTAGTCATGAGAGGAAACAGTGCCGATATGGCTAGACATGCACTGTGCTC
ATCAGCTAGCAAAAGAGTTGCTATTACATTCTTCAAAGTAAGAACAGAGATGAATAACTT
CGTCTCGGATCAAAAAATCCCCCCTCTGACTAAAGCAATGACCTTATGGCAGCCTGGTGT
CCCAACACATTATTCAACTGCAAATGGAGCAGCTAATGGTTATAAGATTATGGATGTGAT
GCCTAAATGGGGTTTCCTTCGAGCTCCAGAATTTATGGTAGCTCCTGTGCATCCGATGGT
TCTAAGCCCTCGAAAAATTCCAACTGGTGGTACTGGTGTCTTTCTTCCATTATCAAGAAA
ACCTGCAAAACATATTCCACCACGTGCCCAGAAAAGGCGGTTTCTTGAGCTACCTTCCCC
TAGTGGGTCGCCTAAATCAGTGAGCAGTTCAGAAGCAAGTACGGCTGTTTAG