Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g084120.3.1
CDS Infomation

BIG SEEDS 1 (AHRD V3.3 *** K4CAR7_SOLLC)
Sequence

ATGCCGCCGGAAGAAACAGTTTCCAAGTCACCTCTCGATAAACCTCTCAATCAGCTCACT
GACGATGACATTTCTCAGCTCACTCGCGAAGACTGCCGCCGTTACCTCAAACAAAAAGGA
ATGAGAAAGCCGTCATGGAATAAATCACAGGCGATTCAGCAAGTTATATCGTTGAAGGCT
CTCCTCGAGCCGGATACTGACGCCGGAAGTCGGAAGAAACTTCACATTCCTCGTGCAGAT
ACTCATGTCCAGAGAGGGAAAAATACCTATGGCGAACCTTCTGAACCAGTGCCTGATAGA
AGAAATCAGCAAGATAAACCTGATCTTTCCAATCATAGCACTGCCCTTCCGGTCACTGTT
GTTGACAATTCAGCTCCTTCTAGAACTATAGGTTCAGCAGATAAACCAGTAGGACAAATG
ACAATCTTCTATAGAGGCAAGGTGAATGTCTATGATGATGTGCCTGCTGACAAGGCACAA
AAAATCATGTGTCTTGCTTCAAGCCCTCTTTGTATGCCTTCAGAAACTCCATCGAATGCC
ACTGCAGCAGCTCGACATTCAGCATACTGCTTACAAGCTGCAAATAGTAAACTACGCCTA
GATACTGGTATAATACTGACTATTCAAACAGTGAAAATGAGTGAGGTTTCTCGAGTTCCT
ATAGAAGAAAGCAACCGCTTATGCAATGATAATCCTGGAGCAGTGGAGAGCCCCGCAAGC
AGGAAAGCATCAGTACAAAGATATCTTGAGAAGCGAAAAGAAAGGTTCAAGTGGAAGAGA
AAGGTAGAAACAACTTCATCAGCTAACTTGGATATCTATTTAAGCGATCGAATTGGGACT
TGTTCACCAAGTGACTATGCAAGTGGGGCTGATCTTAGCTTCCCACCCCACATTACACCT
ACAGGAAGTGGTCCTATACAAGACAACATTCAGATGAATCCCACCTTTTCTAGTGGTCTC
AATGACAGAGCATCAGATTCCTGCGTCACTGGAACCAACCATCCTCCCTGGGACACATTC
ATAAGGACTGCATTGCAGGATACTGCACATGCGAAGAAGTATTGGGAAAGAATTGTCTTC
TCCTCTACTTATGTTTCTTTCCCTTTATATAATACCTACCTTTCTCCTGTAAAATCTGAA
GTTCAAGATCATGATAGCACATAG

Peptide Sequence

PEP ID

Solyc06g084120.3.1
PEP Infomation

BIG SEEDS 1 (AHRD V3.3 *** K4CAR7_SOLLC)
Sequence

MPPEETVSKSPLDKPLNQLTDDDISQLTREDCRRYLKQKGMRKPSWNKSQAIQQVISLKA
LLEPDTDAGSRKKLHIPRADTHVQRGKNTYGEPSEPVPDRRNQQDKPDLSNHSTALPVTV
VDNSAPSRTIGSADKPVGQMTIFYRGKVNVYDDVPADKAQKIMCLASSPLCMPSETPSNA
TAAARHSAYCLQAANSKLRLDTGIILTIQTVKMSEVSRVPIEESNRLCNDNPGAVESPAS
RKASVQRYLEKRKERFKWKRKVETTSSANLDIYLSDRIGTCSPSDYASGADLSFPPHITP
TGSGPIQDNIQMNPTFSSGLNDRASDSCVTGTNHPPWDTFIRTALQDTAHAKKYWERIVF
SSTYVSFPLYNTYLSPVKSEVQDHDST*

Transcript Sequence

Transcript ID

Solyc06g084120.3.1
Transcript Infomation

BIG SEEDS 1 (AHRD V3.3 *** K4CAR7_SOLLC)
Sequence

CGTAAATATTGCCAATGCAATATCTGATTTGATATAATCTTTCTAATGTGTAACTTAATC
ACTTGATCATTAAACATTTTATTAAATTCTGTAATTTTATAAAACTAAGATTAAATTATT
TTTATCATAGGAAGATGAAAAAGAAAGAAAGATGTGACATGTGAATTGTGACAAAGGACT
ACTAAAGTGCTATTTGTAATTGTCTTTTTTCTGAAAAAGAAAAAAAGGTTAGTAAAATTA
AAAAAAATGGGAATACAAATTCGAAAATGGAGCGGGGAGGAATTAAAGTTGATGATAATG
ACTGTTGGGTGTGTGGCTTCATGGAACTGAAGGCTTTCTGACCCCTACTACTTTACGGGT
CACAAATTGAAATTGCCCCCCCGTCTAAACTTTTCGCCATAACTTTTTTCTTTCCGATAC
TCGGCGCCGGAACTTGACAGCATGCCGCCGGAAGAAACAGTTTCCAAGTCACCTCTCGAT
AAACCTCTCAATCAGCTCACTGACGATGACATTTCTCAGCTCACTCGCGAAGACTGCCGC
CGTTACCTCAAACAAAAAGGAATGAGAAAGCCGTCATGGAATAAATCACAGGCGATTCAG
CAAGTTATATCGTTGAAGGCTCTCCTCGAGCCGGATACTGACGCCGGAAGTCGGAAGAAA
CTTCACATTCCTCGTGCAGATACTCATGTCCAGAGAGGGAAAAATACCTATGGCGAACCT
TCTGAACCAGTGCCTGATAGAAGAAATCAGCAAGATAAACCTGATCTTTCCAATCATAGC
ACTGCCCTTCCGGTCACTGTTGTTGACAATTCAGCTCCTTCTAGAACTATAGGTTCAGCA
GATAAACCAGTAGGACAAATGACAATCTTCTATAGAGGCAAGGTGAATGTCTATGATGAT
GTGCCTGCTGACAAGGCACAAAAAATCATGTGTCTTGCTTCAAGCCCTCTTTGTATGCCT
TCAGAAACTCCATCGAATGCCACTGCAGCAGCTCGACATTCAGCATACTGCTTACAAGCT
GCAAATAGTAAACTACGCCTAGATACTGGTATAATACTGACTATTCAAACAGTGAAAATG
AGTGAGGTTTCTCGAGTTCCTATAGAAGAAAGCAACCGCTTATGCAATGATAATCCTGGA
GCAGTGGAGAGCCCCGCAAGCAGGAAAGCATCAGTACAAAGATATCTTGAGAAGCGAAAA
GAAAGGTTCAAGTGGAAGAGAAAGGTAGAAACAACTTCATCAGCTAACTTGGATATCTAT
TTAAGCGATCGAATTGGGACTTGTTCACCAAGTGACTATGCAAGTGGGGCTGATCTTAGC
TTCCCACCCCACATTACACCTACAGGAAGTGGTCCTATACAAGACAACATTCAGATGAAT
CCCACCTTTTCTAGTGGTCTCAATGACAGAGCATCAGATTCCTGCGTCACTGGAACCAAC
CATCCTCCCTGGGACACATTCATAAGGACTGCATTGCAGGATACTGCACATGCGAAGAAG
TATTGGGAAAGAATTGTCTTCTCCTCTACTTATGTTTCTTTCCCTTTATATAATACCTAC
CTTTCTCCTGTAAAATCTGAAGTTCAAGATCATGATAGCACATAG