Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g084060.3.1
CDS Infomation

F-box family protein (AHRD V3.3 *** B9GS69_POPTR)
Sequence

ATGCAGGGCCGTCAACCCCATCCCCACACCACCACTCCTATATCCGAAGTTATCCTTCCA
AAGCGTGGCAAGAAGCGGGGTAGCTACAGTTGTGGCCGATGCGGTGTACCCAAAAAAGGC
CATGTTTGCAATTTTCCTAAGAACCTTAATCCGATTGATAATCCCAGTCCCAATCCCAAT
TCGTCACTCTTAGCTTCCCCACCCTCTGTTGTTCGTCCTCAGCCGCCACCTCCCCTGCCG
CAACGCCATGTACTCCCACAGCTCCGGCGAGCACTTTCATTTGATGACGTTGATGTTAAT
GATTCACCTGGATCTGATGACGAGGGGGATTTCTCCGATCTGGATAACGAATCGGATCGA
GTTGGGTCCGGATCGGGGATAGGGACGTTGCCTTCGAGTTGTTTATGGGAAGTGTTTAAG
AGATTACCGCCTCCGGCGTTGCTTTCATCGGCGAGGGTTTGTAAGGGGTGGTTGGAAAGT
TCTAGAAGGATCTGGAAGTCTGCTGTGGAGCTTAGACTTAGGGTTCCCGTAAATGCCCAG
ATTGGACTTGTCGGGTCGGTGTTAAAGAAATGTCCAGGGCTTGTTAAGCTTTCTCTTAGA
ATGGAAAGTGACATTGATGCTACCATGTTGGCCTGCATTGCTTTTTCCTGTCCTAAACTG
GATTCGATGGAGATACTTATGTGTAATACCTCAGTCAATCGGATCACTGGGGATGAATTG
GGTCGTTTTGTTGCTGAGAAAAGATCTCTTACTAATCTCAAGATGGAAGGTTGCTCTAAT
CTTGGGGGTTTCACTCTTTGCTCAACCAGTCTTTCAACTCTTTCGCTTTCAGATCTCTAT
TGTCATGCTAAGATGGTCTTCAACTGCCCCAACTTGAAGGATGTTTCCCTGGATTTTTCT
CACCAAGAAAATGACACCACCGATCTTACTCTCATGGTCGATGGTCTTGGAAGGAGCTGC
CCGAGACTCCAGAACATTCATATTGCCTCCATCCGCCTAACACATGCTGTTGTGCTTGCT
TTAACAGCAGCAAATCTAAGGGGGTTACGGATGCTCTCTCTTGTACTGGGTTCAGAAATA
ACTGATGCATCTGTTGCTGCTATCGCTTCAAGCTACTCAAACCTTGAGTTGCTTGATTTG
AGTGGGTCCAGCATTAGTGATAGTGGCATTGGAATGATATGCAACATATTCCCCGAGACA
TTGTCTAAACTTCTCCTTGCTCTTTGTCCAAATATCACTTCAAGTGGCATTCAATTTGCT
GCAGCTCAGTTGCCTAATCTAGAGCTCATGGATTGTGGTATGACCATATCTGATCCTGAT
TTAGACAATCCAACATCTCAGGAAAATAATGACCTCCAGTTACAAAGAACTCCCAATAGT
AAACAACACCTTATATATCAAAAACTGATTATCAAGCATACCTGCTTGAAGAAACTCAGC
TTATGGGGCTGCTCTGGCTTAGATGCCTTATATCTGAATTGCCCAGAACTGAAAGATTTG
AATCTGAACTCTTGTACCAACCTGAATCCAGAAAGATTGCTGCTCCAATGCCCCAATCTG
GAATATGTTCATGCATTAGGTTGCCAGGACGCGTTGGTTGGAACCCTTAAGAATCAGGTA
TGCGCAGATTTTATGGGTGTGGAAGATCATTCTCATTGCAAACGTCTTCCTGATGGCTCT
AAAAGGATCAAGGTTCCGGATTTATTCAGCCCACAGCCAAATGACAAGAAGACTAAGAGG
ATTTCGAAGCGCTGTTGTACTGTGCTTGTAAACTAG

Peptide Sequence

PEP ID

Solyc06g084060.3.1
PEP Infomation

F-box family protein (AHRD V3.3 *** B9GS69_POPTR)
Sequence

MQGRQPHPHTTTPISEVILPKRGKKRGSYSCGRCGVPKKGHVCNFPKNLNPIDNPSPNPN
SSLLASPPSVVRPQPPPPLPQRHVLPQLRRALSFDDVDVNDSPGSDDEGDFSDLDNESDR
VGSGSGIGTLPSSCLWEVFKRLPPPALLSSARVCKGWLESSRRIWKSAVELRLRVPVNAQ
IGLVGSVLKKCPGLVKLSLRMESDIDATMLACIAFSCPKLDSMEILMCNTSVNRITGDEL
GRFVAEKRSLTNLKMEGCSNLGGFTLCSTSLSTLSLSDLYCHAKMVFNCPNLKDVSLDFS
HQENDTTDLTLMVDGLGRSCPRLQNIHIASIRLTHAVVLALTAANLRGLRMLSLVLGSEI
TDASVAAIASSYSNLELLDLSGSSISDSGIGMICNIFPETLSKLLLALCPNITSSGIQFA
AAQLPNLELMDCGMTISDPDLDNPTSQENNDLQLQRTPNSKQHLIYQKLIIKHTCLKKLS
LWGCSGLDALYLNCPELKDLNLNSCTNLNPERLLLQCPNLEYVHALGCQDALVGTLKNQV
CADFMGVEDHSHCKRLPDGSKRIKVPDLFSPQPNDKKTKRISKRCCTVLVN*

Transcript Sequence

Transcript ID

Solyc06g084060.3.1
Transcript Infomation

F-box family protein (AHRD V3.3 *** B9GS69_POPTR)
Sequence

TAGTGGTACGTAATGGAATTGCTGCCTATAAAAACACCAATTTTGTATTAAAATGAAAAA
AATTATTGGGCGGAGGCGCCAAACTACAGAAAACTCCCGCGCCATTCTCCCACCTTTTAT
TTTTACTCATCTCTTACCTCAATTTTACCTACACATTTCACTGTCGCCGCCGGCAAGCTT
CCGATTAACAATGGCGGATCCTAAATTTATATATATATAAAGCTCTAAAAAATTCTGATC
GGAAGAACTCACTGTACAATTTTTTTTGGATCCGCCAATTGACGGCGAAATCGAGATGCA
GGGCCGTCAACCCCATCCCCACACCACCACTCCTATATCCGAAGTTATCCTTCCAAAGCG
TGGCAAGAAGCGGGGTAGCTACAGTTGTGGCCGATGCGGTGTACCCAAAAAAGGCCATGT
TTGCAATTTTCCTAAGAACCTTAATCCGATTGATAATCCCAGTCCCAATCCCAATTCGTC
ACTCTTAGCTTCCCCACCCTCTGTTGTTCGTCCTCAGCCGCCACCTCCCCTGCCGCAACG
CCATGTACTCCCACAGCTCCGGCGAGCACTTTCATTTGATGACGTTGATGTTAATGATTC
ACCTGGATCTGATGACGAGGGGGATTTCTCCGATCTGGATAACGAATCGGATCGAGTTGG
GTCCGGATCGGGGATAGGGACGTTGCCTTCGAGTTGTTTATGGGAAGTGTTTAAGAGATT
ACCGCCTCCGGCGTTGCTTTCATCGGCGAGGGTTTGTAAGGGGTGGTTGGAAAGTTCTAG
AAGGATCTGGAAGTCTGCTGTGGAGCTTAGACTTAGGGTTCCCGTAAATGCCCAGATTGG
ACTTGTCGGGTCGGTGTTAAAGAAATGTCCAGGGCTTGTTAAGCTTTCTCTTAGAATGGA
AAGTGACATTGATGCTACCATGTTGGCCTGCATTGCTTTTTCCTGTCCTAAACTGGATTC
GATGGAGATACTTATGTGTAATACCTCAGTCAATCGGATCACTGGGGATGAATTGGGTCG
TTTTGTTGCTGAGAAAAGATCTCTTACTAATCTCAAGATGGAAGGTTGCTCTAATCTTGG
GGGTTTCACTCTTTGCTCAACCAGTCTTTCAACTCTTTCGCTTTCAGATCTCTATTGTCA
TGCTAAGATGGTCTTCAACTGCCCCAACTTGAAGGATGTTTCCCTGGATTTTTCTCACCA
AGAAAATGACACCACCGATCTTACTCTCATGGTCGATGGTCTTGGAAGGAGCTGCCCGAG
ACTCCAGAACATTCATATTGCCTCCATCCGCCTAACACATGCTGTTGTGCTTGCTTTAAC
AGCAGCAAATCTAAGGGGGTTACGGATGCTCTCTCTTGTACTGGGTTCAGAAATAACTGA
TGCATCTGTTGCTGCTATCGCTTCAAGCTACTCAAACCTTGAGTTGCTTGATTTGAGTGG
GTCCAGCATTAGTGATAGTGGCATTGGAATGATATGCAACATATTCCCCGAGACATTGTC
TAAACTTCTCCTTGCTCTTTGTCCAAATATCACTTCAAGTGGCATTCAATTTGCTGCAGC
TCAGTTGCCTAATCTAGAGCTCATGGATTGTGGTATGACCATATCTGATCCTGATTTAGA
CAATCCAACATCTCAGGAAAATAATGACCTCCAGTTACAAAGAACTCCCAATAGTAAACA
ACACCTTATATATCAAAAACTGATTATCAAGCATACCTGCTTGAAGAAACTCAGCTTATG
GGGCTGCTCTGGCTTAGATGCCTTATATCTGAATTGCCCAGAACTGAAAGATTTGAATCT
GAACTCTTGTACCAACCTGAATCCAGAAAGATTGCTGCTCCAATGCCCCAATCTGGAATA
TGTTCATGCATTAGGTTGCCAGGACGCGTTGGTTGGAACCCTTAAGAATCAGGTATGCGC
AGATTTTATGGGTGTGGAAGATCATTCTCATTGCAAACGTCTTCCTGATGGCTCTAAAAG
GATCAAGGTTCCGGATTTATTCAGCCCACAGCCAAATGACAAGAAGACTAAGAGGATTTC
GAAGCGCTGTTGTACTGTGCTTGTAAACTAGTCCAGTGCCTGTCGCATTGTTAGTGTATT
ATTGTGAGCCATAATTAGAGAATAAATTATAAAACAAATTCTGGTAATATCAATATAGGT
AAGAAGAAAAGCTAAAGAAACTGCTCCAACTGTATTCCCCTACAATAATAAACTAAACTT
GCCATTTTGAAACTTATGGTCATATTTTGACCAAAAGAATGTCAACTTTTCTTTTCTTCA
GATGGAAATCAAAATGAATAGAGTGAGTGCATTTTCAT