Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g083980.2.1
CDS Infomation

bHLH transcription factor138
Sequence

ATGGCAGAGAAATTTTTTCTGAAGGGAGAGGATAAGGTTAATATGGAGGGGGTATTAGGC
AGCGAAGCAGTAGAATTTTTCTCTTGGTCAGCTTCAAATCACATGCTGACAGAATTTACT
TCATCAAGGGGGGATTTGGGAGTGCAGCAGGCGCTCTGCAAGATTGTTGAGGGGTCTGAT
TGGACTTATGCAATCTATTGGCAAGTTGCAAAGTCGAAATCTGGAAAATCAGCTTTAATA
TGGGGCGATGGACATTGCAGAGAAACAAAGATAGGGCAAGGTGAAGGTGCAAATGATTCC
GCGCATCAGAAAATGATGGACGGAAACAAGAAAAAGATGGTTCTTCAAAAGATTCACACT
TGCTTTGGAGGGTCAGAAGATGATAATATTGCTGCCAAGTTGGAATCTGTTTCGGACGTG
GAGGTGTTTTATCTCACATCAATGTATTATATCTTCCCATTCGATAAGCCTTCTAGTCCT
TCTCAATCATTTAATTCTGCTAGATCAATATGGGGTTCTGATTTAAAAGGTTGCTTAGAG
CATTTCCAATCAAGATCTTATCTAGCAAAGTTGGCTCGATTCGAGACACTAGTGTTTGTT
CCGCTGAAATCAGGGGTTGTGGAGCTTGGTTCTGTGAAGTCTATTCCGGAAGATCAGAAT
TTGATTCAGATGGTGAAAACATCGGTGGTGGTATCTAATCCTCCGCAGCCCAAAGCAAAT
ACAAAGATATTTGGTCGGGAACTCAGTCTAGGTGGCGCTAAGTCAGGTCCCATCAGCATA
AATTTTTCTCCGAAGGTGGAAGAAGAGCTGAGTTTTGCTTCAGATTCGTACGAAGTACAA
GCAGCGCTAGGTAGTTCTCAGGTTTATGGGAACTCATCAAACGGGTATCGAAGTGATGAA
GGTGAAGGGAAACTTTACAAGGAAGAATTAGATGAACGGAAACCAAGAAAGAGGGGCAGA
AAGCCTGCCAATGGGAGGGAAGAAGCATTGAATCATGTTGAAGCAGAGAGGCAAAGGCGT
GAGAAGCTAAACCAGAGGTTTTATGCTTTAAGAGCAGTTGTTCCGAATATCTCAAAGATG
GATAAAGCATCGCTGCTTGGAGATGCAATTGCTTATATCACAGATCTCCAGGCAAGAATT
AGGGTTTTAGATGCTGAGAAGGAGATGGTAGGCGACAAGCAAAAGCAGCAGGTTATCCTG
GAGATTGATTTTCATCAAAGACAAGATGATGCAGTTGTAAGAGTAGGCTGCCCTTTGAAT
GCTCACCCTGTTTCTAGAGTTTTGAAGACATTTCAGGAACATCAAGTGGTGGCACAAGAA
TCCAATGTCTCATTAACAGAAAACGGCGAACTTGTACACATGTTCTCTATACGAGCTCCT
GGCCCTGCTGCTGAGGATTTGAAGGAAAAGCTGACAGCTGCTAGCCGTTTTGCTTTAAAG
ACCCGGTGGTCAGTATCAGTGATCAGATTGTTATGCTTTGCTCGATTATTCGTGTATGAG
CATCAATGTCTAGCTGGTAAGTTTGCATTATATTTTGTTGACTATACAATCTAA

Peptide Sequence

PEP ID

Solyc06g083980.2.1
PEP Infomation

bHLH transcription factor138
Sequence

MAEKFFLKGEDKVNMEGVLGSEAVEFFSWSASNHMLTEFTSSRGDLGVQQALCKIVEGSD
WTYAIYWQVAKSKSGKSALIWGDGHCRETKIGQGEGANDSAHQKMMDGNKKKMVLQKIHT
CFGGSEDDNIAAKLESVSDVEVFYLTSMYYIFPFDKPSSPSQSFNSARSIWGSDLKGCLE
HFQSRSYLAKLARFETLVFVPLKSGVVELGSVKSIPEDQNLIQMVKTSVVVSNPPQPKAN
TKIFGRELSLGGAKSGPISINFSPKVEEELSFASDSYEVQAALGSSQVYGNSSNGYRSDE
GEGKLYKEELDERKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKM
DKASLLGDAIAYITDLQARIRVLDAEKEMVGDKQKQQVILEIDFHQRQDDAVVRVGCPLN
AHPVSRVLKTFQEHQVVAQESNVSLTENGELVHMFSIRAPGPAAEDLKEKLTAASRFALK
TRWSVSVIRLLCFARLFVYEHQCLAGKFALYFVDYTI*

Transcript Sequence

Transcript ID

Solyc06g083980.2.1
Transcript Infomation

bHLH transcription factor138
Sequence

GCTACTTGTGTGTGTGGATTCAGATCTAAAATTCTAAACTTTGAAGACAAGTGTCTGATG
AAGTCCACATGAAAAACGAGCAATCTTTTATTATACAAATACATGATACATGCACCTATC
CCATCTTCATTTCATCTTCCAGGGGTTTTGTTTTTTCAGACTTGTAATTGCTGAAGTGAT
GTATTGAAGGTTCGAGCTTTAGAGGGTATTTCATGATTCTGGGAGTGCTATGTCATAGTA
TTCCAGCATTGGATTTGAATCAGGAATTGATTTCTTAGGGATAAATTTTCTCCAAGTAGT
GGTCCAAGAAAAGAGTGGTGTTCAAGTTCTTTCGAATTGGAAATCTTTGATTGGCTTGAC
ATGGCAGAGAAATTTTTTCTGAAGGGAGAGGATAAGGTTAATATGGAGGGGGTATTAGGC
AGCGAAGCAGTAGAATTTTTCTCTTGGTCAGCTTCAAATCACATGCTGACAGAATTTACT
TCATCAAGGGGGGATTTGGGAGTGCAGCAGGCGCTCTGCAAGATTGTTGAGGGGTCTGAT
TGGACTTATGCAATCTATTGGCAAGTTGCAAAGTCGAAATCTGGAAAATCAGCTTTAATA
TGGGGCGATGGACATTGCAGAGAAACAAAGATAGGGCAAGGTGAAGGTGCAAATGATTCC
GCGCATCAGAAAATGATGGACGGAAACAAGAAAAAGATGGTTCTTCAAAAGATTCACACT
TGCTTTGGAGGGTCAGAAGATGATAATATTGCTGCCAAGTTGGAATCTGTTTCGGACGTG
GAGGTGTTTTATCTCACATCAATGTATTATATCTTCCCATTCGATAAGCCTTCTAGTCCT
TCTCAATCATTTAATTCTGCTAGATCAATATGGGGTTCTGATTTAAAAGGTTGCTTAGAG
CATTTCCAATCAAGATCTTATCTAGCAAAGTTGGCTCGATTCGAGACACTAGTGTTTGTT
CCGCTGAAATCAGGGGTTGTGGAGCTTGGTTCTGTGAAGTCTATTCCGGAAGATCAGAAT
TTGATTCAGATGGTGAAAACATCGGTGGTGGTATCTAATCCTCCGCAGCCCAAAGCAAAT
ACAAAGATATTTGGTCGGGAACTCAGTCTAGGTGGCGCTAAGTCAGGTCCCATCAGCATA
AATTTTTCTCCGAAGGTGGAAGAAGAGCTGAGTTTTGCTTCAGATTCGTACGAAGTACAA
GCAGCGCTAGGTAGTTCTCAGGTTTATGGGAACTCATCAAACGGGTATCGAAGTGATGAA
GGTGAAGGGAAACTTTACAAGGAAGAATTAGATGAACGGAAACCAAGAAAGAGGGGCAGA
AAGCCTGCCAATGGGAGGGAAGAAGCATTGAATCATGTTGAAGCAGAGAGGCAAAGGCGT
GAGAAGCTAAACCAGAGGTTTTATGCTTTAAGAGCAGTTGTTCCGAATATCTCAAAGATG
GATAAAGCATCGCTGCTTGGAGATGCAATTGCTTATATCACAGATCTCCAGGCAAGAATT
AGGGTTTTAGATGCTGAGAAGGAGATGGTAGGCGACAAGCAAAAGCAGCAGGTTATCCTG
GAGATTGATTTTCATCAAAGACAAGATGATGCAGTTGTAAGAGTAGGCTGCCCTTTGAAT
GCTCACCCTGTTTCTAGAGTTTTGAAGACATTTCAGGAACATCAAGTGGTGGCACAAGAA
TCCAATGTCTCATTAACAGAAAACGGCGAACTTGTACACATGTTCTCTATACGAGCTCCT
GGCCCTGCTGCTGAGGATTTGAAGGAAAAGCTGACAGCTGCTAGCCGTTTTGCTTTAAAG
ACCCGGTGGTCAGTATCAGTGATCAGATTGTTATGCTTTGCTCGATTATTCGTGTATGAG
CATCAATGTCTAGCTGGTAAGTTTGCATTATATTTTGTTGACTATACAATCTAAATGTAA
GTTTTGGCCGAGAATGGTATCTGCTTTT