Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g083910.3.1
CDS Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT4G10500.1)
Sequence

ATGGAAAATAATTTAGTGTCAAACTGGTGCAAAAATGTACAAACTTTGCCTGAAAGTTAC
ATATTCCCAGAAGATGAAAGACCTGGAGAACCTATTGTTCCTTTAAGTGGTAGCAGTCCA
ATTATAGACTTGACTACTCATCAACATGACCAAGCTCAACAAATAATTAAAGCCAGTCAG
GATTTTGGCTATTTTCAGGTAATCAACCATGGGATTTCAGAAACATTATTGGAAGAGACA
GTAGATGTGTTGAAAGAATTTTTTGAGATGCCAGCTAAAGAGAAAGCAAAGTACTACTCA
GTTGACCCAAATAGCAAATGCAAACTCTACACAAGCACTATGAATTACTCCAATGAAGAT
AAACATTATTGGAGAGATGCTTTAGCACATCATTGTCATCCTATTCAACATTTCTTGCCT
TTTTGGCCAGAAAAACCAACTCGTTATCGAGAAGTGATTAGTGCATATTCAATTGAAACA
AGGAAGCTAATCACAAAGATTTCAGATGTGATTAGTGAAGGATTAGGACTTGAAAAGGGG
TATTTTGGAGGTGAATTAAGCAAAGTTCAAATGCTATTAGTGAACTGTTATCCTCCATGT
CCTGATCCAAATTTGGCACTTGGAATGCATAGCCATTGTGACCCAAATTTGTTCACAATT
TTGCTTCAAGACAATGTTTGTGGCTTACAAATTTTCAAGGATGGAAAATGGATTGCTGTG
GAACCAATTCCTAATGCATTTGTGGTCATCATTGGTTGTCAATTACAGATTATCAGTAAC
AATAAGCTAAAAAGTGTGATTCATCGAGCAGTGACAAATTCAAAAGAAACTCGAATTTGT
GTTGGTAATTTTGTGATTCCTTCTTCAGATTGTCACATTGAACCTGCAAGTGATTTGGTT
AATGGAACAACAAATATTCCAGCATACAAGCCATATCAGTACAAAGAGTTCTTGCACACC
TATGCAACAAACCATGGAGATTTTGAAGCTGTACTTCAGTCTTACAAGCTCTAA

Peptide Sequence

PEP ID

Solyc06g083910.3.1
PEP Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT4G10500.1)
Sequence

MENNLVSNWCKNVQTLPESYIFPEDERPGEPIVPLSGSSPIIDLTTHQHDQAQQIIKASQ
DFGYFQVINHGISETLLEETVDVLKEFFEMPAKEKAKYYSVDPNSKCKLYTSTMNYSNED
KHYWRDALAHHCHPIQHFLPFWPEKPTRYREVISAYSIETRKLITKISDVISEGLGLEKG
YFGGELSKVQMLLVNCYPPCPDPNLALGMHSHCDPNLFTILLQDNVCGLQIFKDGKWIAV
EPIPNAFVVIIGCQLQIISNNKLKSVIHRAVTNSKETRICVGNFVIPSSDCHIEPASDLV
NGTTNIPAYKPYQYKEFLHTYATNHGDFEAVLQSYKL*

Transcript Sequence

Transcript ID

Solyc06g083910.3.1
Transcript Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT4G10500.1)
Sequence

TTAATAAATAATATGTCTCGCTTGACAAAAAAAATAAGAAAAAAATTATTGGGGTGGCAA
GTAGAAACAAACTTGTTGTGTATTCCTTGTAATGGAATCTGATTCGTTTCAACAGCATTA
ATTTTTTATTAATTGAAATAAAGCAATTTGGCTAGAAAAATCCAAACATCAAATCCTTTA
ATAATCGAATAAATATGATCATAGACTTATGTGAACTATTAGAAAGTGTAGGTACAACAA
TATCTGATTGATCCAATGGAAAATAATTTAGTGTCAAACTGGTGCAAAAATGTACAAACT
TTGCCTGAAAGTTACATATTCCCAGAAGATGAAAGACCTGGAGAACCTATTGTTCCTTTA
AGTGGTAGCAGTCCAATTATAGACTTGACTACTCATCAACATGACCAAGCTCAACAAATA
ATTAAAGCCAGTCAGGATTTTGGCTATTTTCAGGTAATCAACCATGGGATTTCAGAAACA
TTATTGGAAGAGACAGTAGATGTGTTGAAAGAATTTTTTGAGATGCCAGCTAAAGAGAAA
GCAAAGTACTACTCAGTTGACCCAAATAGCAAATGCAAACTCTACACAAGCACTATGAAT
TACTCCAATGAAGATAAACATTATTGGAGAGATGCTTTAGCACATCATTGTCATCCTATT
CAACATTTCTTGCCTTTTTGGCCAGAAAAACCAACTCGTTATCGAGAAGTGATTAGTGCA
TATTCAATTGAAACAAGGAAGCTAATCACAAAGATTTCAGATGTGATTAGTGAAGGATTA
GGACTTGAAAAGGGGTATTTTGGAGGTGAATTAAGCAAAGTTCAAATGCTATTAGTGAAC
TGTTATCCTCCATGTCCTGATCCAAATTTGGCACTTGGAATGCATAGCCATTGTGACCCA
AATTTGTTCACAATTTTGCTTCAAGACAATGTTTGTGGCTTACAAATTTTCAAGGATGGA
AAATGGATTGCTGTGGAACCAATTCCTAATGCATTTGTGGTCATCATTGGTTGTCAATTA
CAGATTATCAGTAACAATAAGCTAAAAAGTGTGATTCATCGAGCAGTGACAAATTCAAAA
GAAACTCGAATTTGTGTTGGTAATTTTGTGATTCCTTCTTCAGATTGTCACATTGAACCT
GCAAGTGATTTGGTTAATGGAACAACAAATATTCCAGCATACAAGCCATATCAGTACAAA
GAGTTCTTGCACACCTATGCAACAAACCATGGAGATTTTGAAGCTGTACTTCAGTCTTAC
AAGCTCTAATTAAAAAGCTTAATTATGTATGTGTGTGAC