Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g083070.3.1
CDS Infomation

Fimbrin, putative (AHRD V3.3 *** B9SMN8_RICCO)
Sequence

ATGGCTGGATATGTAGGTGTTTTTGTATCTGATACATGGCTTCAGAGTCAGTTCACTCAG
GTTGAGCTTCGGCGATTGAAATCTCACTTTAATGCGATGAAAAGAGAAAATGGAGATCTG
ATGCTCGCAGACTTACCATCTAAAATGGCCAGGATAAAGCACGTCGGTGAGAATCTTACA
GAACAAGAAAGAGAGTCGTTTCTAAGAGATTCCTACAAAAGCTTGGAAGAAGATGTTGAT
TTCGAACTATTTCTTCAGGTTTATTTGAAAATCCAAGCACATGCTGCTGCAAGGATGGGA
AATACTGCAAAGAGTTCATCAGCTTTTGTCAAGTCAGCAACTTCTACATTGCTCCACACA
ATTAGTGAATCTGAAAAGGCATCATATGTTGCACACATTAACAGCTATCTTGCGGATGAT
GAGTTTTTGAAGAAATATCTTCCTATTGATCCTTTAACTAATGATCTCTTTGAGGTTTCC
AAGGATGGAGTTCTTATTTGCAAGCTTATCAATGTGGCTGTACCTGGAACAATTGATGAA
CGAGCAATAAACATGAAGAGAATGCTGAATCCATGGGAGAGGAATGAAAATCATACCTTG
TGCCTCAACTCTGCTAAGGCAATTGGTTGTACTCTAGTGAATATTGGCACTCAGGACTTT
ATTGAAGGAAGGAGGCATCTAGTTCTTGGAGTGATATCTCAAATCATTAAGATTCAACTA
TTGGCAGATCTCAACTTAAAGAAAACACCTCAGCTATTGGAGTTAGTTGATGATAACAAG
GACGCAGAGGAGCTGATGAGTCTACCTCCAGAAAAAATCTTGCTCAGATGGATGAATTTT
CAATTGAAAAAAGCTAAATACGAGAAAATTGTGACAAACTTCTCATCTGACATAAAGGAT
GCAGAAGCTTATGCTCACCTCTTAAATGTTCTTGCCCCGGAGTACATTAATCCCACTACA
CTCACTGTGAAAGAACATTTAGAAAGAGCGAAGTTGGTTTTGGATCATGCGGATAGAATG
GGTTGCAAAAGATACTTAACAGCAAAAGATATTGTGGAAGGCTCTCCAAATCTTAACCTT
GCCTTTGTGGCACATATCTTTCAGCATAGGAATGGGCTGTCAACTCAAACAAAGGAAATA
TCCTTTCTGGAGATTTCACCAGATGAAGCTCAAATGTCCAGGGAGGAGAGAGCTTTCCGC
TTTTGGATCAATAGTCTTGGAAATTCATCTTACATAGACAATGTTTTTGAAGATCTCAGA
AATGGATGGTTGCTTTTAGAGACACTTGACAAGGTGTCTCCTGGAATTGTTAATTGGAAA
ATTGCTACTAAGCCTCCAATTAAGATGCCGTTCAGAAAAGTAGAAAACTGCAATCAAGTT
GTGAAGATTGGGAAGCAACTGAAGTTTTCTCTAGTAAATATTGCTGGAAATGACATTGTA
CAGGGAAATAAAAAATTAATATTGGCTTACTTGTGGCAGTTAATGCGATGTAACATGCTT
CAGCTCTTGAAGAATTTGAGATTTCATTCAAATGGGAAGGAAATCACTGATGCAGATATC
TTAGAGTGGTCCAACAGCAAAGTAAGAAATTCAGGAAGCAAGAGTCGCATGGCTAGTTTT
AAGGATAAGAGTTTGTCAGATGGCATCTTTTTCCTTGAGCTGCTTAGTGCTGTACACCCT
CGAGCTGTTAACTGGAGCCTTGTTACAAAAGGAGAAACTGAGGAGCAAAAGAAGATGAAC
GCAACCTACATTATCAGTATTGCAAGGAAACTTGGATGTTCAATATTTTTATTACCCGAA
GATCTGATTGAGGTAAATCAAAAGATGATGCTTACACTCACAGCAAGCATAATGTATTGG
CACTTGAAACAACCAATGGAGGACCAAATTTCAATTTCAGATAGTGATAGTAGCTCAGTG
GACACAATTTCAACCTCAACGTTGGATGATACCGCGTCTGAGTGTTCAATGGACGACAAC
AGCAACAGATAA

Peptide Sequence

PEP ID

Solyc06g083070.3.1
PEP Infomation

Fimbrin, putative (AHRD V3.3 *** B9SMN8_RICCO)
Sequence

MAGYVGVFVSDTWLQSQFTQVELRRLKSHFNAMKRENGDLMLADLPSKMARIKHVGENLT
EQERESFLRDSYKSLEEDVDFELFLQVYLKIQAHAAARMGNTAKSSSAFVKSATSTLLHT
ISESEKASYVAHINSYLADDEFLKKYLPIDPLTNDLFEVSKDGVLICKLINVAVPGTIDE
RAINMKRMLNPWERNENHTLCLNSAKAIGCTLVNIGTQDFIEGRRHLVLGVISQIIKIQL
LADLNLKKTPQLLELVDDNKDAEELMSLPPEKILLRWMNFQLKKAKYEKIVTNFSSDIKD
AEAYAHLLNVLAPEYINPTTLTVKEHLERAKLVLDHADRMGCKRYLTAKDIVEGSPNLNL
AFVAHIFQHRNGLSTQTKEISFLEISPDEAQMSREERAFRFWINSLGNSSYIDNVFEDLR
NGWLLLETLDKVSPGIVNWKIATKPPIKMPFRKVENCNQVVKIGKQLKFSLVNIAGNDIV
QGNKKLILAYLWQLMRCNMLQLLKNLRFHSNGKEITDADILEWSNSKVRNSGSKSRMASF
KDKSLSDGIFFLELLSAVHPRAVNWSLVTKGETEEQKKMNATYIISIARKLGCSIFLLPE
DLIEVNQKMMLTLTASIMYWHLKQPMEDQISISDSDSSSVDTISTSTLDDTASECSMDDN
SNR*

Transcript Sequence

Transcript ID

Solyc06g083070.3.1
Transcript Infomation

Fimbrin, putative (AHRD V3.3 *** B9SMN8_RICCO)
Sequence

AGGAGATTCAAGTTCAATATTGGGGTAAAACTTTCCCTTATAAATAATATGATTCCGTAC
GAAAGAGATTGAAATTTAAAAATCTTTAGCTAAAAATAAAGGACTACTTTATCAATAATC
GTTGTTGGTTAATAAACAATGTTAATACAAGGATAGCGGTTAAAAAGGGATAAAATCGTC
ATAATTTGAATTTTCGCTGAGAACAACTTTTGAATATTGACAGCTCTTCTTCTGTCCCCA
GTTTACACTGTACTATTAGGCCTCTCTTCCATTCTCAAATCACATGCTTCTCTCACTTTC
TTTGGTTAGTGAGAGAAACATCTCCCAATCCTTCAAAGAGAAAATCATCATTTTCTTCTA
CATTTCGTTATATAATTGGAGGTTTTGATTAACAGAAGATCAAACAATGGCTGGATATGT
AGGTGTTTTTGTATCTGATACATGGCTTCAGAGTCAGTTCACTCAGGTTGAGCTTCGGCG
ATTGAAATCTCACTTTAATGCGATGAAAAGAGAAAATGGAGATCTGATGCTCGCAGACTT
ACCATCTAAAATGGCCAGGATAAAGCACGTCGGTGAGAATCTTACAGAACAAGAAAGAGA
GTCGTTTCTAAGAGATTCCTACAAAAGCTTGGAAGAAGATGTTGATTTCGAACTATTTCT
TCAGGTTTATTTGAAAATCCAAGCACATGCTGCTGCAAGGATGGGAAATACTGCAAAGAG
TTCATCAGCTTTTGTCAAGTCAGCAACTTCTACATTGCTCCACACAATTAGTGAATCTGA
AAAGGCATCATATGTTGCACACATTAACAGCTATCTTGCGGATGATGAGTTTTTGAAGAA
ATATCTTCCTATTGATCCTTTAACTAATGATCTCTTTGAGGTTTCCAAGGATGGAGTTCT
TATTTGCAAGCTTATCAATGTGGCTGTACCTGGAACAATTGATGAACGAGCAATAAACAT
GAAGAGAATGCTGAATCCATGGGAGAGGAATGAAAATCATACCTTGTGCCTCAACTCTGC
TAAGGCAATTGGTTGTACTCTAGTGAATATTGGCACTCAGGACTTTATTGAAGGAAGGAG
GCATCTAGTTCTTGGAGTGATATCTCAAATCATTAAGATTCAACTATTGGCAGATCTCAA
CTTAAAGAAAACACCTCAGCTATTGGAGTTAGTTGATGATAACAAGGACGCAGAGGAGCT
GATGAGTCTACCTCCAGAAAAAATCTTGCTCAGATGGATGAATTTTCAATTGAAAAAAGC
TAAATACGAGAAAATTGTGACAAACTTCTCATCTGACATAAAGGATGCAGAAGCTTATGC
TCACCTCTTAAATGTTCTTGCCCCGGAGTACATTAATCCCACTACACTCACTGTGAAAGA
ACATTTAGAAAGAGCGAAGTTGGTTTTGGATCATGCGGATAGAATGGGTTGCAAAAGATA
CTTAACAGCAAAAGATATTGTGGAAGGCTCTCCAAATCTTAACCTTGCCTTTGTGGCACA
TATCTTTCAGCATAGGAATGGGCTGTCAACTCAAACAAAGGAAATATCCTTTCTGGAGAT
TTCACCAGATGAAGCTCAAATGTCCAGGGAGGAGAGAGCTTTCCGCTTTTGGATCAATAG
TCTTGGAAATTCATCTTACATAGACAATGTTTTTGAAGATCTCAGAAATGGATGGTTGCT
TTTAGAGACACTTGACAAGGTGTCTCCTGGAATTGTTAATTGGAAAATTGCTACTAAGCC
TCCAATTAAGATGCCGTTCAGAAAAGTAGAAAACTGCAATCAAGTTGTGAAGATTGGGAA
GCAACTGAAGTTTTCTCTAGTAAATATTGCTGGAAATGACATTGTACAGGGAAATAAAAA
ATTAATATTGGCTTACTTGTGGCAGTTAATGCGATGTAACATGCTTCAGCTCTTGAAGAA
TTTGAGATTTCATTCAAATGGGAAGGAAATCACTGATGCAGATATCTTAGAGTGGTCCAA
CAGCAAAGTAAGAAATTCAGGAAGCAAGAGTCGCATGGCTAGTTTTAAGGATAAGAGTTT
GTCAGATGGCATCTTTTTCCTTGAGCTGCTTAGTGCTGTACACCCTCGAGCTGTTAACTG
GAGCCTTGTTACAAAAGGAGAAACTGAGGAGCAAAAGAAGATGAACGCAACCTACATTAT
CAGTATTGCAAGGAAACTTGGATGTTCAATATTTTTATTACCCGAAGATCTGATTGAGGT
AAATCAAAAGATGATGCTTACACTCACAGCAAGCATAATGTATTGGCACTTGAAACAACC
AATGGAGGACCAAATTTCAATTTCAGATAGTGATAGTAGCTCAGTGGACACAATTTCAAC
CTCAACGTTGGATGATACCGCGTCTGAGTGTTCAATGGACGACAACAGCAACAGATAA