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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g082940.3.1
CDS Infomation

Photosystem I reaction center subunit XI (AHRD V3.3 *** A0A061DNS9_THECC)
Sequence

ATGGCTACTGCAGCTTCCCCAATGGCTAGCCAGTTGAAGAGCAGTTTTACTTCGTCTTTA
ACCAGAGGTCACGGCCTTGTTACTCCCAAAGGCATTTCTGGTGCGCCTTTCAAGATTTTC
CCTTCAACAAGAAAGTCTTGCTTCACCATCAAGGCTGTCCAAGCTGATAAACCTACTTTC
CAAGTGATTCAGCCACTGAATGGTGACCCTTTCATTGGAAGTCTTGAAACTCCAGTCACC
TCAAGCCCATTGATTGCATGGTACCTATCCAACTTGCCTGCCTACCGGACCGCGGTGAAC
CCGCTTCTCCGGGGAGTAGAAGTGGGCCTGGCCCATGGATTCTTACTAGTTGGGCCTTTT
GTAAAAGCTGGTCCATTAAGAAACACAGCTTATGCAGGGGGAGCTGGTTCATTGGCAGCA
GCAGGACTTGTGGTGATCCTTAGCATGTGTTTGACAATTTATGGAATTTCATCATTCAAA
GAAGGAGATCCATCAACAGCACCAGCATTGACATTGACTGGCAGGAAAAAAGTACCAGAT
CAATTGCAAACTGCAGATGGATGGGCTAAATTCACTGGTGGATTCTTTTTTGGTGGAATT
TCTGGTGTCACTTGGGCTTATTTCCTCCTATATGTCCTTGATCTTCCTTACTTTGTTAAG
TAA

Peptide Sequence

PEP ID

Solyc06g082940.3.1
PEP Infomation

Photosystem I reaction center subunit XI (AHRD V3.3 *** A0A061DNS9_THECC)
Sequence

MATAASPMASQLKSSFTSSLTRGHGLVTPKGISGAPFKIFPSTRKSCFTIKAVQADKPTF
QVIQPLNGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPF
VKAGPLRNTAYAGGAGSLAAAGLVVILSMCLTIYGISSFKEGDPSTAPALTLTGRKKVPD
QLQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK*

Transcript Sequence

Transcript ID

Solyc06g082940.3.1
Transcript Infomation

Photosystem I reaction center subunit XI (AHRD V3.3 *** A0A061DNS9_THECC)
Sequence

CCACAAAATTTGTCTGCCACCAAAAAATCCTCATGTTCATGTTTGAATCTTAGTTATATT
CCTGTCTGACCTAAGTGTAACAATATTTGCAAAATGGCTACTGCAGCTTCCCCAATGGCT
AGCCAGTTGAAGAGCAGTTTTACTTCGTCTTTAACCAGAGGTCACGGCCTTGTTACTCCC
AAAGGCATTTCTGGTGCGCCTTTCAAGATTTTCCCTTCAACAAGAAAGTCTTGCTTCACC
ATCAAGGCTGTCCAAGCTGATAAACCTACTTTCCAAGTGATTCAGCCACTGAATGGTGAC
CCTTTCATTGGAAGTCTTGAAACTCCAGTCACCTCAAGCCCATTGATTGCATGGTACCTA
TCCAACTTGCCTGCCTACCGGACCGCGGTGAACCCGCTTCTCCGGGGAGTAGAAGTGGGC
CTGGCCCATGGATTCTTACTAGTTGGGCCTTTTGTAAAAGCTGGTCCATTAAGAAACACA
GCTTATGCAGGGGGAGCTGGTTCATTGGCAGCAGCAGGACTTGTGGTGATCCTTAGCATG
TGTTTGACAATTTATGGAATTTCATCATTCAAAGAAGGAGATCCATCAACAGCACCAGCA
TTGACATTGACTGGCAGGAAAAAAGTACCAGATCAATTGCAAACTGCAGATGGATGGGCT
AAATTCACTGGTGGATTCTTTTTTGGTGGAATTTCTGGTGTCACTTGGGCTTATTTCCTC
CTATATGTCCTTGATCTTCCTTACTTTGTTAAGTAAATTTCATTAATTGATGCAACTATT
ATGAATCAAAGTTGTATATCGAACCGCTTGATCTCTTGGGGGAATGTAATGAATTTTTAC
TAGCATATCCGCACATTTTGTTCTTGATTCTAATTCT