Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g082430.2.1
CDS Infomation

LOB domain-containing protein, putative (AHRD V3.3 *** B9S4B8_RICCO)
Sequence

ATGTCAAGAGAAAGGGAGAGATTAGATGAGATGGGAAAGAAGTTAAAGACAGAGATAGAT
ATTTCACAGCTACAAATGCAACAACAAATGGGAAGAAGACACGTGTTGGGACCTGTTGGG
GGAGGAACAACATTGAACAATGTTACACCTTGTGCTGCTTGTAAACTTTTAAGAAGAAGA
TGTGCTGAGGAATGCCCTTTTTCTCCATATTTTTCCCCACATGAACCTCACAAATTTGCT
GCTGTTCATAAAGTATTTGGGGCAAGCAATGTCTCCAAATTGCTAATGGAGGTGCCAGTG
GGACAAAGGGCAGATGCAGCAAATAGTTTGGTATATGAAGCAAATGTGAGGCTAAGAGAT
CCAGTGTATGGATGCATGGGTGCAATTTCAACTCTACAACAACAAATTCAAAATTTACAA
GTTGAGCTTAATACAATTAGGGCTGAAATATTGAGATACAAATATAGAGAAGCTGCTAAT
AGTCTTATTGCTTCTATTTCCACCTCTGTGCCACCTGAGCTACCACAAGCTCCTCCTACT
CCGCCACCACCACCACCACCACCCTCCGTGGTGGTGGTTTCGTCATCATCTTCTTCTGCA
TCATCAACTTCTTCTAATTTATACACACCGGCCTCGTCTAGTGTGGCAAACTTTAGTGCC
ATTACTAATAATAACATATCGTATTTTGATCAGCAATAG

Peptide Sequence

PEP ID

Solyc06g082430.2.1
PEP Infomation

LOB domain-containing protein, putative (AHRD V3.3 *** B9S4B8_RICCO)
Sequence

MSRERERLDEMGKKLKTEIDISQLQMQQQMGRRHVLGPVGGGTTLNNVTPCAACKLLRRR
CAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKLLMEVPVGQRADAANSLVYEANVRLRD
PVYGCMGAISTLQQQIQNLQVELNTIRAEILRYKYREAANSLIASISTSVPPELPQAPPT
PPPPPPPPSVVVVSSSSSSASSTSSNLYTPASSSVANFSAITNNNISYFDQQ*

Transcript Sequence

Transcript ID

Solyc06g082430.2.1
Transcript Infomation

LOB domain-containing protein, putative (AHRD V3.3 *** B9S4B8_RICCO)
Sequence

TTCTCATTTTCCCTCTCCCTTTGAAAACTCAATTATCTTCATCTTAATTTCAATTTATCT
TCCATTAACCTCAAGTCATATCTAGAATGTCAAGAGAAAGGGAGAGATTAGATGAGATGG
GAAAGAAGTTAAAGACAGAGATAGATATTTCACAGCTACAAATGCAACAACAAATGGGAA
GAAGACACGTGTTGGGACCTGTTGGGGGAGGAACAACATTGAACAATGTTACACCTTGTG
CTGCTTGTAAACTTTTAAGAAGAAGATGTGCTGAGGAATGCCCTTTTTCTCCATATTTTT
CCCCACATGAACCTCACAAATTTGCTGCTGTTCATAAAGTATTTGGGGCAAGCAATGTCT
CCAAATTGCTAATGGAGGTGCCAGTGGGACAAAGGGCAGATGCAGCAAATAGTTTGGTAT
ATGAAGCAAATGTGAGGCTAAGAGATCCAGTGTATGGATGCATGGGTGCAATTTCAACTC
TACAACAACAAATTCAAAATTTACAAGTTGAGCTTAATACAATTAGGGCTGAAATATTGA
GATACAAATATAGAGAAGCTGCTAATAGTCTTATTGCTTCTATTTCCACCTCTGTGCCAC
CTGAGCTACCACAAGCTCCTCCTACTCCGCCACCACCACCACCACCACCCTCCGTGGTGG
TGGTTTCGTCATCATCTTCTTCTGCATCATCAACTTCTTCTAATTTATACACACCGGCCT
CGTCTAGTGTGGCAAACTTTAGTGCCATTACTAATAATAACATATCGTATTTTGATCAGC
AATAGTCATATGTCACATAAAATGAAACAGATCAAACTATTGAAGGAAAGATATTTGGAG
GATTTTCAGTTCACTTTTTTTTTTTAATTTTCAAACTTGTCATTGCCAAGAGGATTTTAT
TATATATACATACTATATTGTATCTCCAATTATGATAATTACAGCTAGCTAGAGAGATAT
TTGATGATGATTAATTGTCTTTTTAATTTTCATTGATTTTGTAATGCTCAATTTGTGCTT
TTCAATTTGTATCTGGAAGAGATTTTTCTTTTATTTTTAGACATGCATGCATAGCCTTTT
TTTTTAATTAAAA