Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g082210.1.1
CDS Infomation	LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) (AHRD V3.3 *** AT1G07090.1)
Sequence	ATGGATTCAACATCTAGAGTTGAACAACCCGACCCAAACATTGTCGGTAGCAGCGAAGGA GGTACAGGTACATCATCAGCAAGCGCTGTGACGGAGGGGGGACAGTCAACAACGGTGTCT GCAGCACCGCCAAGTCGATACGAGTCACAGAAACGTCGAGATTGGAATACTTTTTTACAG TACTTAAGGAACCACAAACCGCCATTAACCCTAGCCCGCTGCAGCGGAGCTCACGTGATC GAGTTCCTTAAGTACCTTGATCAATTTGGGAAAACAAAAGTGCACGTGACCGGGTGCCCG TATTTCGGGCACCCAAATCCACCCGCACCTTGTGCGTGTCCGTTAAAACAGGCTTGGGGT AGCCTTGATGCACTAATTGGAAGGCTAAGAGCTGCTTATGAAGAAAATGGGGGAAAACCT GAATCAAATCCATTTGGTGCCAAAGCTGTTAGAATTTATTTAAGGGAAGTTAGAGAAAGT CAAGCAAAAGCTAGAGGAATTCCTTATGAAAAGAAGAAACGTAAACGGCCCAGTACATCC AGTTCGGTCGCGACAGCTGGAAGTGCTGTCGCGGCAGAAGGAGGAAGTAGTAGTGGTGGT GGTGATGGCAGTGGCGGAGACGGTGTTATTGGTCAACAACCACCTACTGATCCTAATACA ACAGTATAG

Peptide Sequence

PEP ID	Solyc06g082210.1.1
PEP Infomation	LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) (AHRD V3.3 *** AT1G07090.1)
Sequence	MDSTSRVEQPDPNIVGSSEGGTGTSSASAVTEGGQSTTVSAAPPSRYESQKRRDWNTFLQ YLRNHKPPLTLARCSGAHVIEFLKYLDQFGKTKVHVTGCPYFGHPNPPAPCACPLKQAWG SLDALIGRLRAAYEENGGKPESNPFGAKAVRIYLREVRESQAKARGIPYEKKKRKRPSTS SSVATAGSAVAAEGGSSSGGGDGSGGDGVIGQQPPTDPNTTV*

Transcript Sequence

Transcript ID	Solyc06g082210.1.1
Transcript Infomation	LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) (AHRD V3.3 *** AT1G07090.1)
Sequence	ATGGATTCAACATCTAGAGTTGAACAACCCGACCCAAACATTGTCGGTAGCAGCGAAGGA GGTACAGGTACATCATCAGCAAGCGCTGTGACGGAGGGGGGACAGTCAACAACGGTGTCT GCAGCACCGCCAAGTCGATACGAGTCACAGAAACGTCGAGATTGGAATACTTTTTTACAG TACTTAAGGAACCACAAACCGCCATTAACCCTAGCCCGCTGCAGCGGAGCTCACGTGATC GAGTTCCTTAAGTACCTTGATCAATTTGGGAAAACAAAAGTGCACGTGACCGGGTGCCCG TATTTCGGGCACCCAAATCCACCCGCACCTTGTGCGTGTCCGTTAAAACAGGCTTGGGGT AGCCTTGATGCACTAATTGGAAGGCTAAGAGCTGCTTATGAAGAAAATGGGGGAAAACCT GAATCAAATCCATTTGGTGCCAAAGCTGTTAGAATTTATTTAAGGGAAGTTAGAGAAAGT CAAGCAAAAGCTAGAGGAATTCCTTATGAAAAGAAGAAACGTAAACGGCCCAGTACATCC AGTTCGGTCGCGACAGCTGGAAGTGCTGTCGCGGCAGAAGGAGGAAGTAGTAGTGGTGGT GGTGATGGCAGTGGCGGAGACGGTGTTATTGGTCAACAACCACCTACTGATCCTAATACA ACAGTATAG