Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g082190.3.1
CDS Infomation

Protein kinase, putative (AHRD V3.3 *** B9SKV0_RICCO)
Sequence

ATGGCAGCAGCATTGGAGTGCTGGTCCAGTAGAGCAAGTATGGATGAGGACATGGTAGAA
CAAATTCTAATGAGTAACAATGACAGATCGGAGGAGCCGTCGGGAAATGATTGCTCAGCT
GGTGGTGCTAGTTCTACCGGCGCCGGAAGCAATGGAAGTTTTAAAGAGTCCTCTGCGATG
CAGAAGCGTTTACAGAGGCTGAGCCGGAATGTATCGGAGGCTATTGCGTCGCTTAAGAAC
TCACTCAACCTTGAATCGGTTCGTGACCCGCCCTCGGACCGGGTTGAGACCTGCCGGAAG
CATGTTTGGGGTAGTGTTGTACGGGGCTTGACTCAGCTTTATCCTGGTAGTCAACTTCCG
GAGAAGCTTGTCTCTAACATTCGCAAGCATTACGACTCTTTTCCTCTCAGCTATGGGCAA
GCTGGATTCGAAATGAAGGATGTGTTTCTACATATTAGATTGATAGAGCAGGCATCTGCA
GAGGACCACCCAGCCATTATGATACAAGAGGTGTCTGATGATGAAGTCCAAGGGTCGATT
TTCAAGTTGACATTTGCATGTAACTCCTCTATTTCATGGCCTACAATGTCCGGGGCACTC
GACAGCGCCTCAATTTGCTGCAAAAAGATACAGATCTTTGAAAAGAAAGGTTTTACATTG
GGCGTTGTGATGCTTTTGGTTCAATCCGGGAAAGAAAAAATGTTTAAAGCTCGTATCGAG
AATTTTCTTAAATCAGCCCTTAAGAAGCCAAAATCTACTTCAATAAAAAAGCTTCCATTT
GGCCTTTGTGGGACTCAAGAAGAGAACACGAAGAACAGAGAATATGGAGACATTGAAGAG
GACTCTGGACAGCCAACTTACAAAAATGGATTCGAGAATTCGAGCCCAAAGGTCCAGCTT
CGAATGCCTTTACCTACTTCATTGTTTACAGTCTCAGTGGATGAATGGCAGACTGTGTTA
TCTGGTGGGGAAGAGATTGGAAAGTGGTTATTGAGCTCTGATAATCTTGAGTTCATCGAT
CAGATTGGACCTAGTACATTCAAAGGGGTATACAAGGGGAAGAAAGTTACGATTGAGAAG
CTCAGGGGCTGTGATAAAGGAATTGCCTATGAGTTTGTGCTTCGAAAAGATTTGTTGGAG
CTGATGACTTGCGGGCACAAGAGTGTATTGCAATTTTTTGGTGTTTGCATCAATGAAAAT
CATGGTTTGTGTGTTCTGACTAAGTTGATGGAAGGTGGATCAGTTTATGATTTAGTGCTA
AAGAAAAAGAAACTCCAGACTAAAGAAATAATTAGGATTGCCACTGATGTAGCTGAGGGA
ATCAAGTTCATGAATGATCATGGAGTTGCATATAGAGATCTCAATACACAGAGGATCCAT
TTAGACAAAAGTGGGAATGCTTGCTTGGGCGATATGGGCATAATAGCTGCCTGCAGGAGT
ATTGACGAGGCCATGGAGTATGAGACCGATGGTTATAGATGGCTAGCTCCTGAGATAATT
GCAGGTGACCCTGAAACTGTTAAAGAGACCTGGATGAGTAATGTATATAGTTTTGGAATG
ATTATATGGGAATTGGTGGCTGGCGAGGTAGCATATTCTGCTTACTCGCCAGTACAGGCT
GCTGTTGGAATTGCTGCTTGTGGGCTTAGACCTGAAATTCCAAAGGATTGCCCACAAGTT
TTGAGATCTCTTATGATCAAGTGTTGGGACAATTGTCCTTCAAATCGTCCTCAGTTCACG
GAAATTCTGTCAACATTGGTACGTTCCAGCAGTAATAGCAACAGTAAGAGTAGGTAA

Peptide Sequence

PEP ID

Solyc06g082190.3.1
PEP Infomation

Protein kinase, putative (AHRD V3.3 *** B9SKV0_RICCO)
Sequence

MAAALECWSSRASMDEDMVEQILMSNNDRSEEPSGNDCSAGGASSTGAGSNGSFKESSAM
QKRLQRLSRNVSEAIASLKNSLNLESVRDPPSDRVETCRKHVWGSVVRGLTQLYPGSQLP
EKLVSNIRKHYDSFPLSYGQAGFEMKDVFLHIRLIEQASAEDHPAIMIQEVSDDEVQGSI
FKLTFACNSSISWPTMSGALDSASICCKKIQIFEKKGFTLGVVMLLVQSGKEKMFKARIE
NFLKSALKKPKSTSIKKLPFGLCGTQEENTKNREYGDIEEDSGQPTYKNGFENSSPKVQL
RMPLPTSLFTVSVDEWQTVLSGGEEIGKWLLSSDNLEFIDQIGPSTFKGVYKGKKVTIEK
LRGCDKGIAYEFVLRKDLLELMTCGHKSVLQFFGVCINENHGLCVLTKLMEGGSVYDLVL
KKKKLQTKEIIRIATDVAEGIKFMNDHGVAYRDLNTQRIHLDKSGNACLGDMGIIAACRS
IDEAMEYETDGYRWLAPEIIAGDPETVKETWMSNVYSFGMIIWELVAGEVAYSAYSPVQA
AVGIAACGLRPEIPKDCPQVLRSLMIKCWDNCPSNRPQFTEILSTLVRSSSNSNSKSR*

Transcript Sequence

Transcript ID

Solyc06g082190.3.1
Transcript Infomation

Protein kinase, putative (AHRD V3.3 *** B9SKV0_RICCO)
Sequence

ATATTTAAATAACAATTTCTCTACTTCTCAGTTCATTTTTATAGAAACTTTTATACCTCT
AAGCTAGTGTTCACTTGGAGCTAGGCTCAAATCATATACACATAACTAACTATTCATATT
ATTAAAAATCAACAAGGAAGACGTGGTATTCTGGATCTGCGTGCTTCAACTCATGGCAGC
AGCATTGGAGTGCTGGTCCAGTAGAGCAAGTATGGATGAGGACATGGTAGAACAAATTCT
AATGAGTAACAATGACAGATCGGAGGAGCCGTCGGGAAATGATTGCTCAGCTGGTGGTGC
TAGTTCTACCGGCGCCGGAAGCAATGGAAGTTTTAAAGAGTCCTCTGCGATGCAGAAGCG
TTTACAGAGGCTGAGCCGGAATGTATCGGAGGCTATTGCGTCGCTTAAGAACTCACTCAA
CCTTGAATCGGTTCGTGACCCGCCCTCGGACCGGGTTGAGACCTGCCGGAAGCATGTTTG
GGGTAGTGTTGTACGGGGCTTGACTCAGCTTTATCCTGGTAGTCAACTTCCGGAGAAGCT
TGTCTCTAACATTCGCAAGCATTACGACTCTTTTCCTCTCAGCTATGGGCAAGCTGGATT
CGAAATGAAGGATGTGTTTCTACATATTAGATTGATAGAGCAGGCATCTGCAGAGGACCA
CCCAGCCATTATGATACAAGAGGTGTCTGATGATGAAGTCCAAGGGTCGATTTTCAAGTT
GACATTTGCATGTAACTCCTCTATTTCATGGCCTACAATGTCCGGGGCACTCGACAGCGC
CTCAATTTGCTGCAAAAAGATACAGATCTTTGAAAAGAAAGGTTTTACATTGGGCGTTGT
GATGCTTTTGGTTCAATCCGGGAAAGAAAAAATGTTTAAAGCTCGTATCGAGAATTTTCT
TAAATCAGCCCTTAAGAAGCCAAAATCTACTTCAATAAAAAAGCTTCCATTTGGCCTTTG
TGGGACTCAAGAAGAGAACACGAAGAACAGAGAATATGGAGACATTGAAGAGGACTCTGG
ACAGCCAACTTACAAAAATGGATTCGAGAATTCGAGCCCAAAGGTCCAGCTTCGAATGCC
TTTACCTACTTCATTGTTTACAGTCTCAGTGGATGAATGGCAGACTGTGTTATCTGGTGG
GGAAGAGATTGGAAAGTGGTTATTGAGCTCTGATAATCTTGAGTTCATCGATCAGATTGG
ACCTAGTACATTCAAAGGGGTATACAAGGGGAAGAAAGTTACGATTGAGAAGCTCAGGGG
CTGTGATAAAGGAATTGCCTATGAGTTTGTGCTTCGAAAAGATTTGTTGGAGCTGATGAC
TTGCGGGCACAAGAGTGTATTGCAATTTTTTGGTGTTTGCATCAATGAAAATCATGGTTT
GTGTGTTCTGACTAAGTTGATGGAAGGTGGATCAGTTTATGATTTAGTGCTAAAGAAAAA
GAAACTCCAGACTAAAGAAATAATTAGGATTGCCACTGATGTAGCTGAGGGAATCAAGTT
CATGAATGATCATGGAGTTGCATATAGAGATCTCAATACACAGAGGATCCATTTAGACAA
AAGTGGGAATGCTTGCTTGGGCGATATGGGCATAATAGCTGCCTGCAGGAGTATTGACGA
GGCCATGGAGTATGAGACCGATGGTTATAGATGGCTAGCTCCTGAGATAATTGCAGGTGA
CCCTGAAACTGTTAAAGAGACCTGGATGAGTAATGTATATAGTTTTGGAATGATTATATG
GGAATTGGTGGCTGGCGAGGTAGCATATTCTGCTTACTCGCCAGTACAGGCTGCTGTTGG
AATTGCTGCTTGTGGGCTTAGACCTGAAATTCCAAAGGATTGCCCACAAGTTTTGAGATC
TCTTATGATCAAGTGTTGGGACAATTGTCCTTCAAATCGTCCTCAGTTCACGGAAATTCT
GTCAACATTGGTACGTTCCAGCAGTAATAGCAACAGTAAGAGTAGGTAATGAAAATCCTT
TCCATCTAGTAGATGCCGCAATCCCTCGTGTAGATCTTTTTGTAGTATCAACAACAACAT
ACCCAGTGTAATCCCTCAAGTGGATTGTAGATCCTTTGTGGCAATGCAAGTTAAATCCTT
CCTTTACTAATGATAAATATCCTCCTATCATCAATATATAATGAAAGGAAAAGAAATTTA
CTGCATTTTTCCTCTTGGAATGTATTTCCAGCTTATAGTTTATGTTTTGTGCTAGAGAAA
TGATTGGTTGGGTCACATCTGGTCTCTCTTAGTCCTATTATGGTTGCCAATTTATCATTA
TTAGTTACTTTTCATGTTGTCTGTACTGTGAATTGATAAACTAGCATAAAGCAGAAAAAG
ACAGAAATATAAAGATTGAGGCATGGCATGAGAGACCACAAAGTCGTAGTAATTTAGGTC
TTTTGTGTTTAGCTGCACTTTATGTTTTTATGGTGGCTAACTATGGGTCCCAATTAAGGG
TCCTTTCTCTGTTTCCTTGTCACTAGAAGTAAAAACAAGGAATACAAGACCTGAACTAAT
TATTTTTTTATTCAAAGAAAAGAGATCCAAATGACATTTTGATGGGCCAACTTTTGAAGG
CAGATTCAGTTGGACTTTTAACCTCAAAGGCAGATCCAAAGCTGGAAAAGTGAACCAGCT
TTTGAATAATATTTGAAATTATGGCCAAACGTATACTAATATTTACTGAGAGCTTGAACT
ATTTAATCATTTTCTTAATGCATTGAGTTTTAAGTTTGAAATAGGGAAGTTCTGCATGTA
AGTTCTGATAGTGTTATCAGACATTACGGGCTCATATGGTACGAAGGATAAGAGATAATT
AATTTCGGAATCAATTTTAGGATGTGTTTATGCCATGTTTGCTTGTGATAAAATTGCGGC
ATAACTTCTCACTAAATAATTATGCTAAGATTGTATGTGTTTTTTTTATCCACGTTGAGG
GTGGAATAATTAATCTCAAGATCATTTATTCCCAGGAAAACTAAGGACATTGGAGCCGCA
TTGAAACATTACGTGTAAAATTATTCTAAAGAGCAAATCAAAGAATCGGAGTACGTCCCA
ATAAGAAAGAAAAAAAAAGTACCTAGAGGTACTTTCACATAC