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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g082080.3.1
CDS Infomation

Protein phosphatase 2C (AHRD V3.3 *** Q3V656_SOLTU)
Sequence

ATGTCTTGCACCGTCGCTCTTTCAAATTCGCCGGTGTTCTCACCGTCTAGGGTTCCGGTG
CCGGCTTCTCTTCGTTGTAAAGTTTCTAGTTCTTCATCTTCTTCTTCACCTGAAACCCTT
AACCTAACTCACTCTCCTTCAAAGACTTCATCTTCTCCTTCTTCGCCGTCGTCGCCGTTA
CGGATTCTTCGGCTTCAGAAACCCCCACCGAGTAACCTTATTAGAGCTTCTAATACTGAT
TGTTCTACTTCTACGGTTTTGAAGAGGAAGAGACCGACTAGGTTGGATCTTCCGGTAGCT
TCGATGAGTTTCGGGAATTTTCCGGTGACTCCTGCTGGGGTAGCGGATTTGGTTGAGGTT
GAGGGTGATGGATATTCTGTTTGCTGTAAAAGGGGGAGAAAAGGTGCAATGGAGGATCGT
CACTCTGCAATGGTTAATCTTAAAGGAGATTCCAAACAGGGTTTTTTTGGTATATTTGAT
GGTCATGGAGGAGTGAAAGCTGCAGAGTTTTCAGCAGAGAACTTGAATAAGAACATTATG
AATGAACTAGGGAAGACAACAGATGACAAAATTGAAGTGGCAGTGAAAAACGGCTATCTT
AAAACAGATACTGAATTTCTCAGCCAAGAAGTTCGGGGTGGATCATGCTGCGTGACAGCG
TTGATCCAAAAGGGCAATCTAGTTGTATCCAATGCTGGGGATTGTCGTGCTGTTGTGAGC
AGAGGAGGGCTTGCTGAGGCATTGACCTCTGATCATAGGCCTTCAAGGAAAGATGAGAAG
GATAGAATTGAGGCATCGGGTGGCTATGTAGATTGTTGTCACGGTGTTTGGAGAATTCAG
GGATCCCTCGCTGTGTCGAGAGGTATTGGGGATCAGTACCTTAAACAATGGGTAACAGCA
GAACCTGAGACGAAGATTCTTGAACTCAATCCTGAATTGGAATTCTTAGTCCTAGCATCT
GATGGCTTATGGGATACCGTTAGCAACCAGGAAGCAGTAGATATTGCTCGGCCTTTGTGC
ACTGGCATCAGTACACAGCAGCCATTGTCCGCGTGTAGAAAGCTTATTGATCTCTCTGTT
TCGCGAGGTTCACTTGATGATATAAGTGTGCTGATAATTCAACTGGGACGATTCTGTTGA

Peptide Sequence

PEP ID

Solyc06g082080.3.1
PEP Infomation

Protein phosphatase 2C (AHRD V3.3 *** Q3V656_SOLTU)
Sequence

MSCTVALSNSPVFSPSRVPVPASLRCKVSSSSSSSSPETLNLTHSPSKTSSSPSSPSSPL
RILRLQKPPPSNLIRASNTDCSTSTVLKRKRPTRLDLPVASMSFGNFPVTPAGVADLVEV
EGDGYSVCCKRGRKGAMEDRHSAMVNLKGDSKQGFFGIFDGHGGVKAAEFSAENLNKNIM
NELGKTTDDKIEVAVKNGYLKTDTEFLSQEVRGGSCCVTALIQKGNLVVSNAGDCRAVVS
RGGLAEALTSDHRPSRKDEKDRIEASGGYVDCCHGVWRIQGSLAVSRGIGDQYLKQWVTA
EPETKILELNPELEFLVLASDGLWDTVSNQEAVDIARPLCTGISTQQPLSACRKLIDLSV
SRGSLDDISVLIIQLGRFC*

Transcript Sequence

Transcript ID

Solyc06g082080.3.1
Transcript Infomation

Protein phosphatase 2C (AHRD V3.3 *** Q3V656_SOLTU)
Sequence

AAAATAGTCAACAGCACAATAAATAAAGTTTTTAAAAAGGTATAGTATAATAAAATAAAA
TCACCGGAAACACGGGATGGGCTTTCATGGGCCATACAATTTTTTCCACTTTGGCCCCAA
TACTTTGACTGCCAGTCTGCCACTATTTCCTCTCCACATATAAATACCGCTTTAACTTTC
CTCTTTCACAAATCTCCATCAGAAATCGAAAAAAAAAACTATAACGGGAAAAAATTCGAA
CGTTAAAGAAAACGACAGATCGGAAAAAACCGCCGGAGAAAATGTCTTGCACCGTCGCTC
TTTCAAATTCGCCGGTGTTCTCACCGTCTAGGGTTCCGGTGCCGGCTTCTCTTCGTTGTA
AAGTTTCTAGTTCTTCATCTTCTTCTTCACCTGAAACCCTTAACCTAACTCACTCTCCTT
CAAAGACTTCATCTTCTCCTTCTTCGCCGTCGTCGCCGTTACGGATTCTTCGGCTTCAGA
AACCCCCACCGAGTAACCTTATTAGAGCTTCTAATACTGATTGTTCTACTTCTACGGTTT
TGAAGAGGAAGAGACCGACTAGGTTGGATCTTCCGGTAGCTTCGATGAGTTTCGGGAATT
TTCCGGTGACTCCTGCTGGGGTAGCGGATTTGGTTGAGGTTGAGGGTGATGGATATTCTG
TTTGCTGTAAAAGGGGGAGAAAAGGTGCAATGGAGGATCGTCACTCTGCAATGGTTAATC
TTAAAGGAGATTCCAAACAGGGTTTTTTTGGTATATTTGATGGTCATGGAGGAGTGAAAG
CTGCAGAGTTTTCAGCAGAGAACTTGAATAAGAACATTATGAATGAACTAGGGAAGACAA
CAGATGACAAAATTGAAGTGGCAGTGAAAAACGGCTATCTTAAAACAGATACTGAATTTC
TCAGCCAAGAAGTTCGGGGTGGATCATGCTGCGTGACAGCGTTGATCCAAAAGGGCAATC
TAGTTGTATCCAATGCTGGGGATTGTCGTGCTGTTGTGAGCAGAGGAGGGCTTGCTGAGG
CATTGACCTCTGATCATAGGCCTTCAAGGAAAGATGAGAAGGATAGAATTGAGGCATCGG
GTGGCTATGTAGATTGTTGTCACGGTGTTTGGAGAATTCAGGGATCCCTCGCTGTGTCGA
GAGGTATTGGGGATCAGTACCTTAAACAATGGGTAACAGCAGAACCTGAGACGAAGATTC
TTGAACTCAATCCTGAATTGGAATTCTTAGTCCTAGCATCTGATGGCTTATGGGATACCG
TTAGCAACCAGGAAGCAGTAGATATTGCTCGGCCTTTGTGCACTGGCATCAGTACACAGC
AGCCATTGTCCGCGTGTAGAAAGCTTATTGATCTCTCTGTTTCGCGAGGTTCACTTGATG
ATATAAGTGTGCTGATAATTCAACTGGGACGATTCTGTTGACAGATACCCAATATAGGTT
AGGAATTCTTTCTTTACTAACTCGCAGATGAATTGCTAGCCAGAGATTTTTACCAGAATA
ACAGTTAGATCAATTATTAGTATGAGGTTTTTAACTCTGTAAATCAAATTGTTATGTGAC
TTCAGATCAGTTGAAATGATGAGGAAAATTCCTTTTTTTATCCATTTGTTCATTAGGCGA
TGTTT