Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g082040.2.1
CDS Infomation	PHD finger transcription factor (AHRD V3.3 - AT5G58610.3)
Sequence	ATGGCGGCAGAACCTGGGCGAGTTCTGAGGAAAAGAAAACTCAAAGTTGACAGAGGAGCA CATCGGAAATTAGGTGTTGATCAAAAAGTTGAGGTGAAGAGTCTTGAAGATGGATTTTTG GGTTCGTGGCATTTGGGTACTGTGATTAGTTGTAGTGATTTGATTCGTGAGGTTCAATAT GATTTTATATGGTCAGACCAGGGCTCTGACAAATTGGTTGAAGTGGTAAACGTATCTCCA ATAATTGAAGGGTTATTACCTGTTGATGAACGGCCAGCTCATCAATGTGGTATGATCAGA CCATCACCGCCCCCTTGTGAACTTGACAGCTGGCCTTATGGTCAGTGTGTCGATTGCTTC TACCAAGATGCATGGTGGGAGGGTGTATTATTTGACCGTGAGGAAGGTCATGAGGAGAGA AAGGTCTTCTTCCCAGAATTGGGTGATGAAATGAAGGCAAAGCTAGGCGAGTTGCGCATA TCTCAAGACTGGGATGAGTTAACGGAGGAATGGAAAATCCGTGGATCATGGTCATTTCTT CAAGTGGTTGAAGAAATTGAGAAACTAAACCCACTCTTAGTTTCGGTTAAACAAATTTGG TATGAAGTGCAGCTGAAGGATGATTTTGATGAACATCTCAAGCAGTGGACATCTTCTTCG AAAGATATTTGGAGGAAACTGGTGAAGGAAGTTGTGCATGACAGTACCAAGTTAACTGTC AAGCATTATCTTTCTGAACTGAACTCCTTACAGATCATCGGAGAGGGATGTCAGTTGCTC GAATTTTCAGAATCTGCTTTTATAGCTGAACTGAACCCTGAAGTGTACTTTGCACCCTTT ACTGAAGCTGCTTATACATTAGATAGTTCGGCCACACTGCCTATGGATCAGGATCTTTCC AATCTTCAACCTGTAGAAAAGCTACTTGTTTCGGAGGAGTCTGCACCTGCCGCAGAGGAT GTTCAAATGACTGGTATTTTGTCCTGTACCGAGAGTGAACTACCTACTTTGGCGAAAGCT AAGCGTGTTAGGGGGAGACCTCGAAAAGTCAAGAAGATATTCAAGGGGCGGACCCAAGTT ACTGAACCTGACTCTTGTCGAGAGGCGAACTCAACAAAAACAATTAAGGAGAAGATATTC GACGATGTTTCCCCTCTTCAGCAGCCTGTGGATCAGGATGTTCCTAATCTTCATCAGCCT TTGAATCAGGATATTTCTGACCTTCAGCCATTAGAGAAGCAACTTGTTCCGGAGGAGTCT GCACCTGCCACAGAGGATGATCTATTAAGTGGTATTGATATTTATAGTTCATTTCCTCCA AGAATATTCCTCTGTATCACCACACATAATGTCTATGTTTTACTTCTGCCTATTGACGAC TTTGCAGGTATTTTATCAAACACCAAGAGTCAGCCACTGACTATTGCGAATTCTAAGGCT TGCAGAGGGAGATCTCGTACAAAGAGGAAGATATATGACAGGCAGACTGTGGTTGGTGAA CCTGCCTCTTGTCGAGAGGCAAACTTGACAAAAACAATTAAGGAGAAGATATTCGAGGAT GATTCCCCTCTTCAGCAGCCTATGGATCAGGATGTTCCTAATCTTCAACAGCCTTTGGAT CAGGATATTTCAGATCTTCAGCCATTAGAGAAGCAACTTGTTTCGGAGGAGTCTGCACCT GCCGCAGAGGATGTTCAAATGACTGGTATTTTGTCCAGTACCGAGAGTGAACTACCGACT TTGGCGAAAGCTAAGCGTGGTAGGGGGAGACCTCGAAAAGTCAAGAAGATATTCAAGGGG CGGACCCGGGTTGGTGAACCTGACTCTTGTCGAGAGGCGAACTCAACAAAAACAATTAAG GAGAAGATATTCGAGGATGTTTCCCCTCTTCAGCAGCCGGTGGATCAGGATGTACCTAAT CTTCAACAGCCTTTGGATCAGGATATTTCAGATCTTCAGCCATTAGAGAAGCAACTTGTT TCGGAGGAGTCTGCACCTGCTGCAGAGGATGATCTATTGAGTGGTATTTTATCAAACACC AAGAGTCGACCACTGACTATTGTGAATTCTAAGGCTTGCAGAGGGAGACCTCGTACAAAG AGGAATATATATGACGAGCAGACTGTGGTTGGTGAACCTGCCTCTTGCCTAGACACAACC TCAACAGAAACATTTAACAAGCTGCCTAGTGATGAGACTGCAGGTATTTTGTCTAGTACC ACACAGACCTTGGAGAATTCTAAGCCTCGCAGAGGGAGACCTCCTAAAAGGATGAAGACA TTGGGTAAACCTGACTCTTGCCCAGAAGCAACCCTGATAAAAGAATTAAAGAAGCCGACT AGTCATCAGATTGCTGGTATTTTGTCCAATGGCAAGTGTGTGAATTCTAAGAGTCGCAGG GGAAGACTTGCTATAAAGAAGAAATTTGTTAGGCAGTTACTGTTTGGTGAACCTGACCCT CACCTAAAAGTAATAACTAAGTGTATGCCATCTATGTCCTCCATACAAGAATTTAAGGAT CATCTGTTATGGACGGGCTGGAAATTTGATGTCAACAAGGTGGGTGGTGAGACTAAGAAT AGTTATGTTGCTCCAAATGGAACGGTATGTGCATCAATTAACGAAATTTGCCAGGTGTTG GAAGCGTCAAAAATATGTGAGGTGGTTCCCCCAGTTGAACAAAGTAGTTTACATGGTGAC ACTGATAACTCCACCCAGTCTCCTTGCATGGAAAGACCAACATGCAGAGAGGTGCCTGAG TTGCACAAAGAAACACTTGCTGCGACTACAGAAATAAGT

Peptide Sequence

PEP ID	Solyc06g082040.2.1
PEP Infomation	PHD finger transcription factor (AHRD V3.3 - AT5G58610.3)
Sequence	MAAEPGRVLRKRKLKVDRGAHRKLGVDQKVEVKSLEDGFLGSWHLGTVISCSDLIREVQY DFIWSDQGSDKLVEVVNVSPIIEGLLPVDERPAHQCGMIRPSPPPCELDSWPYGQCVDCF YQDAWWEGVLFDREEGHEERKVFFPELGDEMKAKLGELRISQDWDELTEEWKIRGSWSFL QVVEEIEKLNPLLVSVKQIWYEVQLKDDFDEHLKQWTSSSKDIWRKLVKEVVHDSTKLTV KHYLSELNSLQIIGEGCQLLEFSESAFIAELNPEVYFAPFTEAAYTLDSSATLPMDQDLS NLQPVEKLLVSEESAPAAEDVQMTGILSCTESELPTLAKAKRVRGRPRKVKKIFKGRTQV TEPDSCREANSTKTIKEKIFDDVSPLQQPVDQDVPNLHQPLNQDISDLQPLEKQLVPEES APATEDDLLSGIDIYSSFPPRIFLCITTHNVYVLLLPIDDFAGILSNTKSQPLTIANSKA CRGRSRTKRKIYDRQTVVGEPASCREANLTKTIKEKIFEDDSPLQQPMDQDVPNLQQPLD QDISDLQPLEKQLVSEESAPAAEDVQMTGILSSTESELPTLAKAKRGRGRPRKVKKIFKG RTRVGEPDSCREANSTKTIKEKIFEDVSPLQQPVDQDVPNLQQPLDQDISDLQPLEKQLV SEESAPAAEDDLLSGILSNTKSRPLTIVNSKACRGRPRTKRNIYDEQTVVGEPASCLDTT STETFNKLPSDETAGILSSTTQTLENSKPRRGRPPKRMKTLGKPDSCPEATLIKELKKPT SHQIAGILSNGKCVNSKSRRGRLAIKKKFVRQLLFGEPDPHLKVITKCMPSMSSIQEFKD HLLWTGWKFDVNKVGGETKNSYVAPNGTVCASINEICQVLEASKICEVVPPVEQSSLHGD TDNSTQSPCMERPTCREVPELHKETLAATTEIS

Transcript Sequence

Transcript ID	Solyc06g082040.2.1
Transcript Infomation	PHD finger transcription factor (AHRD V3.3 - AT5G58610.3)
Sequence	CGCCAAATATTATTAAATTTTCATTAAATTCACAACCACCACTACAAATCTGCTCTGAAC AACACAAATCTAAGTTGATCAAAATCTCGAAATAAATACCGAAAATCATACTTATAAAAC ATAACATATCAAACTTATATAGTACAAATATATAATTTCTCTTTTGGGATATACAACAAA AATGAAGGTCTTGCATGTTAAGTCCTTTCAAATATATATGTTTAAAGGAGAAAACCGGAA GAACAAAACAGAGTGTACTAATAGTTTTTCCCTTTTATCTTACAATTTGGAAAGAAAGAG ACAAAATGTAACCCGACAAATTCGCGATTGAATTAAAACCATTAGCTTAAGGTTTTTTTT TTTTAATTTTTATTTTTATACAATATATAAAAATATAAATCGATACTAAATTTGGAAAAC TGATAGTGTAACTGATAAACCCCACCACTCCCCTATCACTTCCAGAGGAAGTTTTACTCT TCAATGGCGGCAGAACCTGGGCGAGTTCTGAGGAAAAGAAAACTCAAAGTTGACAGAGGA GCACATCGGAAATTAGGTGTTGATCAAAAAGTTGAGGTGAAGAGTCTTGAAGATGGATTT TTGGGTTCGTGGCATTTGGGTACTGTGATTAGTTGTAGTGATTTGATTCGTGAGGTTCAA TATGATTTTATATGGTCAGACCAGGGCTCTGACAAATTGGTTGAAGTGGTAAACGTATCT CCAATAATTGAAGGGTTATTACCTGTTGATGAACGGCCAGCTCATCAATGTGGTATGATC AGACCATCACCGCCCCCTTGTGAACTTGACAGCTGGCCTTATGGTCAGTGTGTCGATTGC TTCTACCAAGATGCATGGTGGGAGGGTGTATTATTTGACCGTGAGGAAGGTCATGAGGAG AGAAAGGTCTTCTTCCCAGAATTGGGTGATGAAATGAAGGCAAAGCTAGGCGAGTTGCGC ATATCTCAAGACTGGGATGAGTTAACGGAGGAATGGAAAATCCGTGGATCATGGTCATTT CTTCAAGTGGTTGAAGAAATTGAGAAACTAAACCCACTCTTAGTTTCGGTTAAACAAATT TGGTATGAAGTGCAGCTGAAGGATGATTTTGATGAACATCTCAAGCAGTGGACATCTTCT TCGAAAGATATTTGGAGGAAACTGGTGAAGGAAGTTGTGCATGACAGTACCAAGTTAACT GTCAAGCATTATCTTTCTGAACTGAACTCCTTACAGATCATCGGAGAGGGATGTCAGTTG CTCGAATTTTCAGAATCTGCTTTTATAGCTGAACTGAACCCTGAAGTGTACTTTGCACCC TTTACTGAAGCTGCTTATACATTAGATAGTTCGGCCACACTGCCTATGGATCAGGATCTT TCCAATCTTCAACCTGTAGAAAAGCTACTTGTTTCGGAGGAGTCTGCACCTGCCGCAGAG GATGTTCAAATGACTGGTATTTTGTCCTGTACCGAGAGTGAACTACCTACTTTGGCGAAA GCTAAGCGTGTTAGGGGGAGACCTCGAAAAGTCAAGAAGATATTCAAGGGGCGGACCCAA GTTACTGAACCTGACTCTTGTCGAGAGGCGAACTCAACAAAAACAATTAAGGAGAAGATA TTCGACGATGTTTCCCCTCTTCAGCAGCCTGTGGATCAGGATGTTCCTAATCTTCATCAG CCTTTGAATCAGGATATTTCTGACCTTCAGCCATTAGAGAAGCAACTTGTTCCGGAGGAG TCTGCACCTGCCACAGAGGATGATCTATTAAGTGGTATTGATATTTATAGTTCATTTCCT CCAAGAATATTCCTCTGTATCACCACACATAATGTCTATGTTTTACTTCTGCCTATTGAC GACTTTGCAGGTATTTTATCAAACACCAAGAGTCAGCCACTGACTATTGCGAATTCTAAG GCTTGCAGAGGGAGATCTCGTACAAAGAGGAAGATATATGACAGGCAGACTGTGGTTGGT GAACCTGCCTCTTGTCGAGAGGCAAACTTGACAAAAACAATTAAGGAGAAGATATTCGAG GATGATTCCCCTCTTCAGCAGCCTATGGATCAGGATGTTCCTAATCTTCAACAGCCTTTG GATCAGGATATTTCAGATCTTCAGCCATTAGAGAAGCAACTTGTTTCGGAGGAGTCTGCA CCTGCCGCAGAGGATGTTCAAATGACTGGTATTTTGTCCAGTACCGAGAGTGAACTACCG ACTTTGGCGAAAGCTAAGCGTGGTAGGGGGAGACCTCGAAAAGTCAAGAAGATATTCAAG GGGCGGACCCGGGTTGGTGAACCTGACTCTTGTCGAGAGGCGAACTCAACAAAAACAATT AAGGAGAAGATATTCGAGGATGTTTCCCCTCTTCAGCAGCCGGTGGATCAGGATGTACCT AATCTTCAACAGCCTTTGGATCAGGATATTTCAGATCTTCAGCCATTAGAGAAGCAACTT GTTTCGGAGGAGTCTGCACCTGCTGCAGAGGATGATCTATTGAGTGGTATTTTATCAAAC ACCAAGAGTCGACCACTGACTATTGTGAATTCTAAGGCTTGCAGAGGGAGACCTCGTACA AAGAGGAATATATATGACGAGCAGACTGTGGTTGGTGAACCTGCCTCTTGCCTAGACACA ACCTCAACAGAAACATTTAACAAGCTGCCTAGTGATGAGACTGCAGGTATTTTGTCTAGT ACCACACAGACCTTGGAGAATTCTAAGCCTCGCAGAGGGAGACCTCCTAAAAGGATGAAG ACATTGGGTAAACCTGACTCTTGCCCAGAAGCAACCCTGATAAAAGAATTAAAGAAGCCG ACTAGTCATCAGATTGCTGGTATTTTGTCCAATGGCAAGTGTGTGAATTCTAAGAGTCGC AGGGGAAGACTTGCTATAAAGAAGAAATTTGTTAGGCAGTTACTGTTTGGTGAACCTGAC CCTCACCTAAAAGTAATAACTAAGTGTATGCCATCTATGTCCTCCATACAAGAATTTAAG GATCATCTGTTATGGACGGGCTGGAAATTTGATGTCAACAAGGTGGGTGGTGAGACTAAG AATAGTTATGTTGCTCCAAATGGAACGGTATGTGCATCAATTAACGAAATTTGCCAGGTG TTGGAAGCGTCAAAAATATGTGAGGTGGTTCCCCCAGTTGAACAAAGTAGTTTACATGGT GACACTGATAACTCCACCCAGTCTCCTTGCATGGAAAGACCAACATGCAGAGAGGTGCCT GAGTTGCACAAAGAAACACTTGCTGCGACTACAGAAATAAGT