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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g082030.3.1
CDS Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT5G58660.1)
Sequence

ATGTCTCAATCTTACAACTTTGAATCCTACCCTCCTTTATTTCGACCATCGCCAAACATC
TCTCAAATTCAAGAATCTGATGAAACAGAGTCGTCACTTTTATTAGACTCTTATATCCCC
GTTATTGATTATTTCAAACGCACAGCTCCAATAATAACGACAACAAAATATCAAGATGTT
AGCGAAGACGGAAATTTAATCAGTGAAGCTTGTAGAGATTGGGGATTATTCCGATTGGTG
AACCATGGAATTCCATTTAGTTTATTGAACCAAATTGAAGAACATGCTAAAAAACTCTTT
TCTTTGCCCTATGAAACAAAAAAGGCCTTTTTTGCTAGTAGCAGCAGCAGCAATTTTGTT
AGCCCCATCTCTTATTTTTGGGGCTCCCCTGCTCTATCACCCTCTGGTGCGGCGCTAGCG
CCGAAAAATAGCGAACAACAAAATAACAACCACACCCTGCAATGGATGGAAGGATTCAAC
GTTTCATTAGCTCAATTATCAAATATTCACTATCAAGATTTATTGCTCGAAACTTTCAGA
TGTTTGCTAGAAGAATATGGTAAGGAGCTTTGTAGGTTGGCTACTGAAATATTCAAAATT
TTGGGACCATTTGAGTCAAATTATATGTCCCTAGAGACTGGTTTATTAAGGGTATATCGT
TACCCAAGATGCCTAGAGCCAGAAAGAACATGGGGAATTGACACACACACAGATAGCTCA
GTACTTTCTATAATTCACCAAGATGATGTTGGTGGACTTCAAGTTTACAAAGATCATCAA
TGGATTGATGTCAATCCTCTCCCTAATACTCTTATTGTCAATATTGGTGACATGTTGCAG
GCAATGAGTGATGATAGATATATGAGTGTGAAGCATAGAGTGAAGGTGAATAGACACAAG
GAGAGAATATCAATTGGTTATTTTGTGTTCCCTGATGAAGATACTATCATTCAAAGCACA
AAGTACAACCCTTTCAGCTACGCAGATTTTCGAGCACAAGTTCAACATGATTTGAAAACA
CTAGGCCTCAAAACTGGCCTTCAAAAATTTAAATTTAGTTAA

Peptide Sequence

PEP ID

Solyc06g082030.3.1
PEP Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT5G58660.1)
Sequence

MSQSYNFESYPPLFRPSPNISQIQESDETESSLLLDSYIPVIDYFKRTAPIITTTKYQDV
SEDGNLISEACRDWGLFRLVNHGIPFSLLNQIEEHAKKLFSLPYETKKAFFASSSSSNFV
SPISYFWGSPALSPSGAALAPKNSEQQNNNHTLQWMEGFNVSLAQLSNIHYQDLLLETFR
CLLEEYGKELCRLATEIFKILGPFESNYMSLETGLLRVYRYPRCLEPERTWGIDTHTDSS
VLSIIHQDDVGGLQVYKDHQWIDVNPLPNTLIVNIGDMLQAMSDDRYMSVKHRVKVNRHK
ERISIGYFVFPDEDTIIQSTKYNPFSYADFRAQVQHDLKTLGLKTGLQKFKFS*

Transcript Sequence

Transcript ID

Solyc06g082030.3.1
Transcript Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT5G58660.1)
Sequence

TTTTTGATTGCTACGCAATTAAGTTGGCTAAAATAATATGTCTCAATCTTACAACTTTGA
ATCCTACCCTCCTTTATTTCGACCATCGCCAAACATCTCTCAAATTCAAGAATCTGATGA
AACAGAGTCGTCACTTTTATTAGACTCTTATATCCCCGTTATTGATTATTTCAAACGCAC
AGCTCCAATAATAACGACAACAAAATATCAAGATGTTAGCGAAGACGGAAATTTAATCAG
TGAAGCTTGTAGAGATTGGGGATTATTCCGATTGGTGAACCATGGAATTCCATTTAGTTT
ATTGAACCAAATTGAAGAACATGCTAAAAAACTCTTTTCTTTGCCCTATGAAACAAAAAA
GGCCTTTTTTGCTAGTAGCAGCAGCAGCAATTTTGTTAGCCCCATCTCTTATTTTTGGGG
CTCCCCTGCTCTATCACCCTCTGGTGCGGCGCTAGCGCCGAAAAATAGCGAACAACAAAA
TAACAACCACACCCTGCAATGGATGGAAGGATTCAACGTTTCATTAGCTCAATTATCAAA
TATTCACTATCAAGATTTATTGCTCGAAACTTTCAGATGTTTGCTAGAAGAATATGGTAA
GGAGCTTTGTAGGTTGGCTACTGAAATATTCAAAATTTTGGGACCATTTGAGTCAAATTA
TATGTCCCTAGAGACTGGTTTATTAAGGGTATATCGTTACCCAAGATGCCTAGAGCCAGA
AAGAACATGGGGAATTGACACACACACAGATAGCTCAGTACTTTCTATAATTCACCAAGA
TGATGTTGGTGGACTTCAAGTTTACAAAGATCATCAATGGATTGATGTCAATCCTCTCCC
TAATACTCTTATTGTCAATATTGGTGACATGTTGCAGGCAATGAGTGATGATAGATATAT
GAGTGTGAAGCATAGAGTGAAGGTGAATAGACACAAGGAGAGAATATCAATTGGTTATTT
TGTGTTCCCTGATGAAGATACTATCATTCAAAGCACAAAGTACAACCCTTTCAGCTACGC
AGATTTTCGAGCACAAGTTCAACATGATTTGAAAACACTAGGCCTCAAAACTGGCCTTCA
AAAATTTAAATTTAGTTAACTATCTTTATTTTGAAAGGAAAATTAAAAAATAAATTTAAA
AAATGGGGAAACAAATTAATCAGTTCTGTATCTTTAGTTGACTGTAATTTGTAAAAGGTA
CTAATTAAACTTTAGTTCAAGTTTTTCTTTTTCTTGTTTATTCCTTCCCTATTATGAAGA
AATTATAGGTAGTTGATTTACATTCTTTACTTCTATTTTCGATTCTTTGTTATATTTTTT
TTAGTATGTAGTAATGTTTTTTATTTGTTTAACAAGTATTTATTTAATTTTAAACTTTTC
GTTTGAACATGTCACTTCTCTAACACTATCAGAAGTTACCAAAAAAATTCTCGTTTTTTT
TTAAACTTCATGTTCATTCAATAGAACAAGTCAAATAAATTTTAATTATTTCGTTTCAGT
TTGTTAGTGTCGCTTAGATTATGTAGAAAGTATA