Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g076780.3.1
CDS Infomation

Glycosyl hydrolase family protein (AHRD V3.3 *** AT3G47000.1)
Sequence

ATGGATTGTATTTACAAAGATCCAAATGCTGCAATTGAAGAAAGAGTAAAAGATCTTCTT
TCTAAAATGACAGTTGAAGAAAAAATTGGTCAAATGACTCAGATCGAAAGAGCTGTTGCT
AATCCTTCTGCTATTAGAGATCGTTGCATTGGGAGTGTTTTGAGTGGAGGTGGAAGTAGA
CCATTTGAGAATGCAGAATCAGGTGATTGGGCTAATATGATTGATGGGTTTCAAAAGGGT
GCAGTTGAGTCCAGACTTGGCATTCCTATTTTCTATGGGACTGATGCTATTCATGGCAAT
AACAATGTTTGGGGTGCCACTATTTTTCCTCACAACATTGGGCTTGGTGCCACCAGAGAT
GCTGATTTAGTAAGACGGATAGGAGAGGTGACAGCTCTTGAAACCAGGGCATGTGGATCT
CAGTATGCTTTTGCGCCTTGTATTGCTGTTGCAAAAGATCCTAGATGGGGAAGATTTTAC
GAGAGTTACAGTGAAGATACTGAAGTTGTAAGAAAGATGACGTCCCTTGTCTCGGGCTTG
CAAGGTCAGCCACCAGAAGGACATCCATATGGCTACCCTTATGTTTCTGGAAGAAATTCT
GTCATGGCAAGTGCAAAGCATTTTGTTGGTGATGGGGCAACTGAGAATGGTACAAATGAA
GGAAATACAATAGCATCGCATGATGATATGTTTAATATTCACCTAGCACCGTATATAGAC
TGTATTGCCCAAGGAGTTTGCACTGTTATGGCCTCCTACTCCAGCTGGAATGGAGACAAA
ATGCACTCTCATCGATATCTTTTAACTGAGGTCTTGAAAGAAAAGCTTGGATTCAAGGGT
CTCCTGATTACAGACTGGGAAGCACTTGAACGGCTTACTGATCCTCATGATGCTGATTAT
CGTCAATCCGTCAAGTTAACCATTAATGCTGGAATTGATATGGTAATGGTGCCATTTAGA
TATGAATTATTTTTGGAGCAGCTGCTTTCACTGGTAGAATCAGGGGAGATACCGATGACC
AGGATAGATGACGCTGTTGAAAGAATCTTGAGAGTCAAATTTGTTGCTGGATTATTTGAA
CATCCGTTTACAGATAGATCATTGATAGATTTGGTTGGTTGCAAGGCACATAGAGAGCTA
GCACGTGAAGCTGTTCGCAAATCCTTAGTTTTGTTGAAAAATGGGAAAGATCCAAAGAAA
CCATTTCTGCCTCTAGATAAGACCGCCAAAAAGATCCTCGTTGCTGGAACTCATGCTGAT
GATCTTGGGTATCAATGTGGAGGATGGACAGCTACTTGGACAGGACTCAGTGGCAGAATC
ACAGTTGGCACAACCATAATGGATGCAATAAGGGAGATGTTGGGTGACAAAACAGAGATA
GTCTTTGAACCAAATCCTACTGCAGAAACTTTTGCTGGTGAAGACTTCTCTTTTGCTATC
GTGGCGATTGGTGAAGGTCCATATTGTGAAACTGGTGGTGATGATCCAGAGCTAAAAATC
CCATTTAACGGAACAGAAATTGCAACTTTTGTCGCTGACAGAGTTCCCACGGTGACAATT
CTCATTTCTGGAAGACCTATGGTTATCGAACCACCACTCTTGGAAAAAGTCGATGCATTT
GTTGCAGCTTGGTTGCCTGGAACTGAAGGAGATGGAATCACAGATGTCCTTTTTGGAGAC
TATCCATTTCAAGGGAAACTACCAGTGACATGGTTTAAAACTGTTGATCAAATTCCAATG
CATGTTCACGGGAATTCAAATCCTCTATTTCCTTTCGGATTTGGTCTTACATCCTAA

Peptide Sequence

PEP ID

Solyc06g076780.3.1
PEP Infomation

Glycosyl hydrolase family protein (AHRD V3.3 *** AT3G47000.1)
Sequence

MDCIYKDPNAAIEERVKDLLSKMTVEEKIGQMTQIERAVANPSAIRDRCIGSVLSGGGSR
PFENAESGDWANMIDGFQKGAVESRLGIPIFYGTDAIHGNNNVWGATIFPHNIGLGATRD
ADLVRRIGEVTALETRACGSQYAFAPCIAVAKDPRWGRFYESYSEDTEVVRKMTSLVSGL
QGQPPEGHPYGYPYVSGRNSVMASAKHFVGDGATENGTNEGNTIASHDDMFNIHLAPYID
CIAQGVCTVMASYSSWNGDKMHSHRYLLTEVLKEKLGFKGLLITDWEALERLTDPHDADY
RQSVKLTINAGIDMVMVPFRYELFLEQLLSLVESGEIPMTRIDDAVERILRVKFVAGLFE
HPFTDRSLIDLVGCKAHRELAREAVRKSLVLLKNGKDPKKPFLPLDKTAKKILVAGTHAD
DLGYQCGGWTATWTGLSGRITVGTTIMDAIREMLGDKTEIVFEPNPTAETFAGEDFSFAI
VAIGEGPYCETGGDDPELKIPFNGTEIATFVADRVPTVTILISGRPMVIEPPLLEKVDAF
VAAWLPGTEGDGITDVLFGDYPFQGKLPVTWFKTVDQIPMHVHGNSNPLFPFGFGLTS*

Transcript Sequence

Transcript ID

Solyc06g076780.3.1
Transcript Infomation

Glycosyl hydrolase family protein (AHRD V3.3 *** AT3G47000.1)
Sequence

ATAGAAACCTTTGGTCCCTGTCTTATTCCTCCAAAAAAAAAAATTATATATATTTTGTGT
TAAAAATCTATCTGATTAGTATAAATTAAGGAGATTAATATCTTCATCTTGTTCAATTAA
TTGTAGCTATGGATTGTATTTACAAAGATCCAAATGCTGCAATTGAAGAAAGAGTAAAAG
ATCTTCTTTCTAAAATGACAGTTGAAGAAAAAATTGGTCAAATGACTCAGATCGAAAGAG
CTGTTGCTAATCCTTCTGCTATTAGAGATCGTTGCATTGGGAGTGTTTTGAGTGGAGGTG
GAAGTAGACCATTTGAGAATGCAGAATCAGGTGATTGGGCTAATATGATTGATGGGTTTC
AAAAGGGTGCAGTTGAGTCCAGACTTGGCATTCCTATTTTCTATGGGACTGATGCTATTC
ATGGCAATAACAATGTTTGGGGTGCCACTATTTTTCCTCACAACATTGGGCTTGGTGCCA
CCAGAGATGCTGATTTAGTAAGACGGATAGGAGAGGTGACAGCTCTTGAAACCAGGGCAT
GTGGATCTCAGTATGCTTTTGCGCCTTGTATTGCTGTTGCAAAAGATCCTAGATGGGGAA
GATTTTACGAGAGTTACAGTGAAGATACTGAAGTTGTAAGAAAGATGACGTCCCTTGTCT
CGGGCTTGCAAGGTCAGCCACCAGAAGGACATCCATATGGCTACCCTTATGTTTCTGGAA
GAAATTCTGTCATGGCAAGTGCAAAGCATTTTGTTGGTGATGGGGCAACTGAGAATGGTA
CAAATGAAGGAAATACAATAGCATCGCATGATGATATGTTTAATATTCACCTAGCACCGT
ATATAGACTGTATTGCCCAAGGAGTTTGCACTGTTATGGCCTCCTACTCCAGCTGGAATG
GAGACAAAATGCACTCTCATCGATATCTTTTAACTGAGGTCTTGAAAGAAAAGCTTGGAT
TCAAGGGTCTCCTGATTACAGACTGGGAAGCACTTGAACGGCTTACTGATCCTCATGATG
CTGATTATCGTCAATCCGTCAAGTTAACCATTAATGCTGGAATTGATATGGTAATGGTGC
CATTTAGATATGAATTATTTTTGGAGCAGCTGCTTTCACTGGTAGAATCAGGGGAGATAC
CGATGACCAGGATAGATGACGCTGTTGAAAGAATCTTGAGAGTCAAATTTGTTGCTGGAT
TATTTGAACATCCGTTTACAGATAGATCATTGATAGATTTGGTTGGTTGCAAGGCACATA
GAGAGCTAGCACGTGAAGCTGTTCGCAAATCCTTAGTTTTGTTGAAAAATGGGAAAGATC
CAAAGAAACCATTTCTGCCTCTAGATAAGACCGCCAAAAAGATCCTCGTTGCTGGAACTC
ATGCTGATGATCTTGGGTATCAATGTGGAGGATGGACAGCTACTTGGACAGGACTCAGTG
GCAGAATCACAGTTGGCACAACCATAATGGATGCAATAAGGGAGATGTTGGGTGACAAAA
CAGAGATAGTCTTTGAACCAAATCCTACTGCAGAAACTTTTGCTGGTGAAGACTTCTCTT
TTGCTATCGTGGCGATTGGTGAAGGTCCATATTGTGAAACTGGTGGTGATGATCCAGAGC
TAAAAATCCCATTTAACGGAACAGAAATTGCAACTTTTGTCGCTGACAGAGTTCCCACGG
TGACAATTCTCATTTCTGGAAGACCTATGGTTATCGAACCACCACTCTTGGAAAAAGTCG
ATGCATTTGTTGCAGCTTGGTTGCCTGGAACTGAAGGAGATGGAATCACAGATGTCCTTT
TTGGAGACTATCCATTTCAAGGGAAACTACCAGTGACATGGTTTAAAACTGTTGATCAAA
TTCCAATGCATGTTCACGGGAATTCAAATCCTCTATTTCCTTTCGGATTTGGTCTTACAT
CCTAAACAAGATGAACTTAAATGCTCAAACGAGACAGCCATGGATTCAACATCACCATAC
CAGCCAGGAATTCTTTCGTTGAGGTCCTCGAGGAGAACTTCAACTGTATTCTTGCTCCTG
AATGGAGAAGTTAAATAGATTGGAATAGCCATATATTACAGTTGTATCTCAAATAACAAA
AAAAAAAACAGAAGCTACTGCTTACTACTAGCTGTATCTTCATGTATGATGTTCAATCAA
TATTATGAATTCATGATGGTTATCTCAATTCTGAGTTTTCATTTCGCCTTTTTCCTATTA
ACTATGTATAGTACCCTCTCTCTGTTACAGCCTTAACAGGAACGTATATTCAAATTATGG
TATGTGATATGTCCCAAAGC