Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g076050.3.1
CDS Infomation

Ankyrin repeat family protein (AHRD V3.3 *** B9GJP4_POPTR)
Sequence

ATGGGTCAGGGGTTCAGTTGTGGAACAAGTGATGAACACGGATTGTTTACTGCTGTTCAG
TGTGGTGATTTGGAGACTGTAAAGGCTCTGTTTGAGAGAAACCCAAGTCTTGTTCATCAT
TCTACAGTTTATGATCGACAGTCTGCTTTACATATTGCTGCTGCCAATGGCCAAATTGAG
GTTGTTTCTATGCTTTTAGACATGTCTGTTAAGCCTGATTTATTGAATCGGTATAAGCAG
ACTCCATTGATGCTAGCAGCAATGCACGGGAAGATCTCTTGTGTGCAAAAGCTTATTGAA
GCCGGGGCCAATATTTTGATGTTTGATTCATTGAATGGGAGGACATGCTTGCACTATGCG
GCCTATTATGGGTACTCTGATTGTCTCAAAACAATTCTTTTTGCTGCTCGGACATCACAC
ATTGCGTCTTCTTGGGGATATGCCCGGTTTGTGAACGTTAATGATGGTAAAGGAGCAACA
CCTTTGCACTTAGCAGCTCGTCAAAGACGGGCTGATTGTGTTCATATTTTACTAGACAAT
GGTGCTCTTGCTTGTGCTTCTACCGATGGATATGGTTTCCCAGGTAGTACACCACTTCAT
TTGGCTGCAAGAGCTGGTTCTCTTGATTGTATCCGTGAATTGTTAGCATGGGGAGCAGAG
CGATTACAAAGAGATGATTTGGGGAGAATACCATACACAATTGCTTTAAGATACAAACAT
GGTGCATGTGCAGCGTTGCTGAATCCTTCATCTGCAGAGCCTCTTGTCTGGCCATCGCCA
TTGAAGTTTATCAGTGAGCTGAATAAAGAGGCAAAACATTTGCTAGAATGTGCATTGATG
GAGGCTAACAAGGAGAGGGAAAAGAACATCCTGAAAGGAACAACTTATTCGCCACCATCG
CCAACCAATTCCGATAATGAGATGGATGACAATATCTCTGAGGTCAATGAAACAGAAATT
TGTTGTATATGCTTCGATCAAGTATGCACAATTCAGGTCCAGGACTGCGGGCACCAGATG
TGTGCACATTGTGTACTGGCGTTATGCTGTCATAAAAAGCCTAATCCTACTACTACCAGT
CCTATTGTACCTGTGTGCCCATTCTGTCGTAGCAACATTGTTCAATTAGATGTTATCAAG
CTGGAAAAGGACGATGGGACTAGCCACGATATTGTTTCCCCTTCAAAGCTTAGGAAGTCT
AGGCGATCAAGAAACTTCAGCGAGGGGAGTAGCAGTTTTAAGGGCTTATCTGCAGTAAGC
TCTTTTGGAAGAATGGTTGGTCGTGGCTCTGGTAGAATTGCTGCTGAAAACGAATACATT
GATAAGCCAATAATCCTTGACTAA

Peptide Sequence

PEP ID

Solyc06g076050.3.1
PEP Infomation

Ankyrin repeat family protein (AHRD V3.3 *** B9GJP4_POPTR)
Sequence

MGQGFSCGTSDEHGLFTAVQCGDLETVKALFERNPSLVHHSTVYDRQSALHIAAANGQIE
VVSMLLDMSVKPDLLNRYKQTPLMLAAMHGKISCVQKLIEAGANILMFDSLNGRTCLHYA
AYYGYSDCLKTILFAARTSHIASSWGYARFVNVNDGKGATPLHLAARQRRADCVHILLDN
GALACASTDGYGFPGSTPLHLAARAGSLDCIRELLAWGAERLQRDDLGRIPYTIALRYKH
GACAALLNPSSAEPLVWPSPLKFISELNKEAKHLLECALMEANKEREKNILKGTTYSPPS
PTNSDNEMDDNISEVNETEICCICFDQVCTIQVQDCGHQMCAHCVLALCCHKKPNPTTTS
PIVPVCPFCRSNIVQLDVIKLEKDDGTSHDIVSPSKLRKSRRSRNFSEGSSSFKGLSAVS
SFGRMVGRGSGRIAAENEYIDKPIILD*

Transcript Sequence

Transcript ID

Solyc06g076050.3.1
Transcript Infomation

Ankyrin repeat family protein (AHRD V3.3 *** B9GJP4_POPTR)
Sequence

AATTTATTAGAGTAAAATAGAATTTTCTCCCAACTCGAAATGTCATATATATTTGCTGTT
ATAGTAGTTTTATTTGGAATCTAACCTGCCCGAAAAATATCTGATTTCTGCCCGTTTTCT
TCTCTCTTCACTCTTTAAGCTGCCCGTTCTTCCCCGCCGTCGCTTTTCGGGCAGCCCAAA
CTTCAATATTCACACATCCCATCTCTACTTTAAACTCCATAAATATGACTCTCTCAATTC
CCAATTCTCCCACCACCACCAGAAACCGTCACCACCGCCGTCCACGGTGGTGAAAAAGGG
GCTTACTCATCGCCGCCGCAGCAGCAGAATAAAGTTCAGATTTTTAATATGGGTCAGGGG
TTCAGTTGTGGAACAAGTGATGAACACGGATTGTTTACTGCTGTTCAGTGTGGTGATTTG
GAGACTGTAAAGGCTCTGTTTGAGAGAAACCCAAGTCTTGTTCATCATTCTACAGTTTAT
GATCGACAGTCTGCTTTACATATTGCTGCTGCCAATGGCCAAATTGAGGTTGTTTCTATG
CTTTTAGACATGTCTGTTAAGCCTGATTTATTGAATCGGTATAAGCAGACTCCATTGATG
CTAGCAGCAATGCACGGGAAGATCTCTTGTGTGCAAAAGCTTATTGAAGCCGGGGCCAAT
ATTTTGATGTTTGATTCATTGAATGGGAGGACATGCTTGCACTATGCGGCCTATTATGGG
TACTCTGATTGTCTCAAAACAATTCTTTTTGCTGCTCGGACATCACACATTGCGTCTTCT
TGGGGATATGCCCGGTTTGTGAACGTTAATGATGGTAAAGGAGCAACACCTTTGCACTTA
GCAGCTCGTCAAAGACGGGCTGATTGTGTTCATATTTTACTAGACAATGGTGCTCTTGCT
TGTGCTTCTACCGATGGATATGGTTTCCCAGGTAGTACACCACTTCATTTGGCTGCAAGA
GCTGGTTCTCTTGATTGTATCCGTGAATTGTTAGCATGGGGAGCAGAGCGATTACAAAGA
GATGATTTGGGGAGAATACCATACACAATTGCTTTAAGATACAAACATGGTGCATGTGCA
GCGTTGCTGAATCCTTCATCTGCAGAGCCTCTTGTCTGGCCATCGCCATTGAAGTTTATC
AGTGAGCTGAATAAAGAGGCAAAACATTTGCTAGAATGTGCATTGATGGAGGCTAACAAG
GAGAGGGAAAAGAACATCCTGAAAGGAACAACTTATTCGCCACCATCGCCAACCAATTCC
GATAATGAGATGGATGACAATATCTCTGAGGTCAATGAAACAGAAATTTGTTGTATATGC
TTCGATCAAGTATGCACAATTCAGGTCCAGGACTGCGGGCACCAGATGTGTGCACATTGT
GTACTGGCGTTATGCTGTCATAAAAAGCCTAATCCTACTACTACCAGTCCTATTGTACCT
GTGTGCCCATTCTGTCGTAGCAACATTGTTCAATTAGATGTTATCAAGCTGGAAAAGGAC
GATGGGACTAGCCACGATATTGTTTCCCCTTCAAAGCTTAGGAAGTCTAGGCGATCAAGA
AACTTCAGCGAGGGGAGTAGCAGTTTTAAGGGCTTATCTGCAGTAAGCTCTTTTGGAAGA
ATGGTTGGTCGTGGCTCTGGTAGAATTGCTGCTGAAAACGAATACATTGATAAGCCAATA
ATCCTTGACTAATTGCAGAATTTTGCATCAAGACTTCCAATTAGCATGATTTTTTAAGAG
CATCCTAAATGGTATATATCGATAAATCTCTCTCCAATCTCTTGTTACCACATTTTTTTA
CAGTTGAAATAGAAGGAATTCTTTGACAGTTGCCTCATTTTTTGTTCTGTTTTGTCCTGG
CTGATGAAAATTCAACATTCTCTCGATGTGTAATGTTATAGGAACAGTCCATAATATAAA
TATGAAAGTCTAATAATTTGTGAATGAAAATGACATTTCTTGCCAGTGATGATCAATTGA
AAGTTAGTGAAGTGTAATAAAACCTTTGCTAAAGAAGGGCATCTATTTGCATGACTTCTT
TTAATGTCAAGAACAAATCGTGTGTAATGTATGGATTAGACATAAGTTTGAATCTTTGTT
GTTGAAAAAAAAAACT