Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g076040.3.1
CDS Infomation

U-box domain-containing protein (AHRD V3.3 *** A0A0K9PZF9_ZOSMR)
Sequence

ATGGAAGAAGGAAGAGGAGTGTTAGTGGAGAAGCTGATTGAGGTAGTTAACGAAATAGCA
GCCATTTCAGATTACAGAACTTCGGTGAAGAAAGAGTATTGCAATCTAGGTAGGAGGCTT
AAATTATTGATTCCAATGTTCGAAGAGATTCGGGATATCAAAGAACCAGTTCCTGAAAAC
TCAATGATAGCTTTGGTTTCATTGAAAGAAGCTCTTGAATCAACCAAGGAATTGCTCAAA
TTCGGCAGCCAGGGAAGCAAGATTTATCTCGTCTTAGAAAGGGAGCAGATAATGAATAAA
TTTCACCAAGTGACAACCCAGCTGGAACAAGCTTTGGGTGGAGTTCATTATCAAGAGCTT
GACATATCTGATGAAGTTAAAGAGCAGGTAGAGCTTGTCCTTTCTCAGTTCCAAAGAGCC
AAAGGAAGGGTTGATACACCTGATGCTGAACTCCATGAGGATCTATTGTCCCTTTACAGC
CAGAGTAATGATCCTGCTATAGATCCAGCTGTCCTAAGGAAATTGGTTAAGAAGTTACAG
CTGACTGGATTATACGATCTCACACAAGAATCATGTGCTTTGCATGATATGGTCACTGCT
ACTGGTGAAGATCCAGAGGAGAGAATCGAGAAGATGTCACTTGTACTGAGGAAAATTAAG
GGCTTTGTGCTTACTGAGACTCCGGAGATTGATTCTTCTTCGAGGGAGAAGTCTTCAACT
TGTAGCGGACAAGTTTCTATCGAGACAACTCATAAGGCCCCAGTTATACCAGATGATTTT
CGGTGTCCTATATCCCTGGAATTGATGAAAGATCCTGTCATTGTTTCATCCGGCCAGACT
TACGAGCGTTCTTCAATTGAGAAGTGGCTGGAAGCAGGGCATAGCACTTGTCCCAAGACA
CAACAAGTCCTCACTAGCAATGTTATCACACCAAACTATGTGTTGCGGAGCCTCATAGCA
CAGTGGTGTGAAATGAATGGAGTTGAATCACCCAAACGACCAGGTAGTTCACCCAATAAA
TCAGCATCCGCATGCACGCCTGCTGAGCACTCGACGATAGAAAATCTCCTGAGAAAGCTC
ACATCTGGCAGCCCTGAAGATCGTCTCTCAGCCACAGGTGAAATCCGCCTTCTTGCTAAA
CGCAATGCTGATAATCGTGTTGCAATAGCTGAAGCAGGTGCTATTCCTCTGCTTGTTGAC
CTTCTTTCCACACCCGATTCTCGGATCCAAGAGCATGCTGTTACAGCACTACTTAACCTT
TCTATCTGTGAGGATAACAAACGGAGCATTGTAACATCAGGGGCAGTGCCTGGTATCGTC
CATGTTCTTAAGAAGGGGAGCATGGAAGCACGTGAAAATGCAGCGGCTGCACTATTTAGC
CTTTCAGTTATAGATGAGAATAAGGTCATAATTGGTACTTTTGGAGCAATACCTCCACTT
GTAACATTATTAAGTGATGGCACCCAGAGAGGGAAGAAAGACGCTGCTACCGCACTTTTC
AATCTGTGCATTTATCAAGGGAACAAGGGCAAGGCAGTAAGGGCTGGAGTTGTGGTCACT
CTGATGGGGCTGCTTACGGAACCTCAAGGTAGTATGATCGACGAAGCACTTGCCATTTTA
GCTATATTGTCTAGTCATCCAGAAGGGAAGACAACCATTGGAGCTGCAGGGGCAGTTCCT
GTTTTGGTTAATGTGATCACAAGTGGTTCTCCCAGAAACAAAGAAAATGCAGCTGCAGTT
TTGGTACACCTTTGCTCTGGGGACCAACATTATCTAGTGGATGTTCAGGAGCTAGGAATA
ATGGGACCATTGCTGGATTTAGTACAAAATGGTACTGAAAGGGGTAGACGAAAGGCAACC
CAGTTGCTTGAACGAATAAATAGATATGCTGAACAGCAAAAACAGGCCCAGACAGAACCC
GAGGCTCCGATTCATAACCAGCTTTCAGAGTCACCACCATCATCGACAAATGTCCTGGAA
TGCTGA

Peptide Sequence

PEP ID

Solyc06g076040.3.1
PEP Infomation

U-box domain-containing protein (AHRD V3.3 *** A0A0K9PZF9_ZOSMR)
Sequence

MEEGRGVLVEKLIEVVNEIAAISDYRTSVKKEYCNLGRRLKLLIPMFEEIRDIKEPVPEN
SMIALVSLKEALESTKELLKFGSQGSKIYLVLEREQIMNKFHQVTTQLEQALGGVHYQEL
DISDEVKEQVELVLSQFQRAKGRVDTPDAELHEDLLSLYSQSNDPAIDPAVLRKLVKKLQ
LTGLYDLTQESCALHDMVTATGEDPEERIEKMSLVLRKIKGFVLTETPEIDSSSREKSST
CSGQVSIETTHKAPVIPDDFRCPISLELMKDPVIVSSGQTYERSSIEKWLEAGHSTCPKT
QQVLTSNVITPNYVLRSLIAQWCEMNGVESPKRPGSSPNKSASACTPAEHSTIENLLRKL
TSGSPEDRLSATGEIRLLAKRNADNRVAIAEAGAIPLLVDLLSTPDSRIQEHAVTALLNL
SICEDNKRSIVTSGAVPGIVHVLKKGSMEARENAAAALFSLSVIDENKVIIGTFGAIPPL
VTLLSDGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVVTLMGLLTEPQGSMIDEALAIL
AILSSHPEGKTTIGAAGAVPVLVNVITSGSPRNKENAAAVLVHLCSGDQHYLVDVQELGI
MGPLLDLVQNGTERGRRKATQLLERINRYAEQQKQAQTEPEAPIHNQLSESPPSSTNVLE
C*

Transcript Sequence

Transcript ID

Solyc06g076040.3.1
Transcript Infomation

U-box domain-containing protein (AHRD V3.3 *** A0A0K9PZF9_ZOSMR)
Sequence

GATTTCGCGACAATTTACATATCCTCATCTATTTAACCACTTACTCATAGAGACAGGGTA
AACGGTTACTCAAAAACCCACCAATAAACCTGTTTTCTTCTTCACAAATCCACTTACTCC
ACACTTCCATCCACCGCCGGTAACAATTAACCGACAATACTCCGCCGGTAAACTTTATTA
TCAAAAGAACTCATCCTGAAGTCCCGCCGCCACAACAATACTCTCTTAATTCTTACTCCA
TTTTCTATCTCCCTTTCTCTCATGGAGTCGACGACTAACAACTGAGCTATTCAGGTCACC
TCCTATTTATAAGTTGTTGTGTTAAAATTTTTGGATCTTTGAAAGGAAATGGAAGAAGGA
AGAGGAGTGTTAGTGGAGAAGCTGATTGAGGTAGTTAACGAAATAGCAGCCATTTCAGAT
TACAGAACTTCGGTGAAGAAAGAGTATTGCAATCTAGGTAGGAGGCTTAAATTATTGATT
CCAATGTTCGAAGAGATTCGGGATATCAAAGAACCAGTTCCTGAAAACTCAATGATAGCT
TTGGTTTCATTGAAAGAAGCTCTTGAATCAACCAAGGAATTGCTCAAATTCGGCAGCCAG
GGAAGCAAGATTTATCTCGTCTTAGAAAGGGAGCAGATAATGAATAAATTTCACCAAGTG
ACAACCCAGCTGGAACAAGCTTTGGGTGGAGTTCATTATCAAGAGCTTGACATATCTGAT
GAAGTTAAAGAGCAGGTAGAGCTTGTCCTTTCTCAGTTCCAAAGAGCCAAAGGAAGGGTT
GATACACCTGATGCTGAACTCCATGAGGATCTATTGTCCCTTTACAGCCAGAGTAATGAT
CCTGCTATAGATCCAGCTGTCCTAAGGAAATTGGTTAAGAAGTTACAGCTGACTGGATTA
TACGATCTCACACAAGAATCATGTGCTTTGCATGATATGGTCACTGCTACTGGTGAAGAT
CCAGAGGAGAGAATCGAGAAGATGTCACTTGTACTGAGGAAAATTAAGGGCTTTGTGCTT
ACTGAGACTCCGGAGATTGATTCTTCTTCGAGGGAGAAGTCTTCAACTTGTAGCGGACAA
GTTTCTATCGAGACAACTCATAAGGCCCCAGTTATACCAGATGATTTTCGGTGTCCTATA
TCCCTGGAATTGATGAAAGATCCTGTCATTGTTTCATCCGGCCAGACTTACGAGCGTTCT
TCAATTGAGAAGTGGCTGGAAGCAGGGCATAGCACTTGTCCCAAGACACAACAAGTCCTC
ACTAGCAATGTTATCACACCAAACTATGTGTTGCGGAGCCTCATAGCACAGTGGTGTGAA
ATGAATGGAGTTGAATCACCCAAACGACCAGGTAGTTCACCCAATAAATCAGCATCCGCA
TGCACGCCTGCTGAGCACTCGACGATAGAAAATCTCCTGAGAAAGCTCACATCTGGCAGC
CCTGAAGATCGTCTCTCAGCCACAGGTGAAATCCGCCTTCTTGCTAAACGCAATGCTGAT
AATCGTGTTGCAATAGCTGAAGCAGGTGCTATTCCTCTGCTTGTTGACCTTCTTTCCACA
CCCGATTCTCGGATCCAAGAGCATGCTGTTACAGCACTACTTAACCTTTCTATCTGTGAG
GATAACAAACGGAGCATTGTAACATCAGGGGCAGTGCCTGGTATCGTCCATGTTCTTAAG
AAGGGGAGCATGGAAGCACGTGAAAATGCAGCGGCTGCACTATTTAGCCTTTCAGTTATA
GATGAGAATAAGGTCATAATTGGTACTTTTGGAGCAATACCTCCACTTGTAACATTATTA
AGTGATGGCACCCAGAGAGGGAAGAAAGACGCTGCTACCGCACTTTTCAATCTGTGCATT
TATCAAGGGAACAAGGGCAAGGCAGTAAGGGCTGGAGTTGTGGTCACTCTGATGGGGCTG
CTTACGGAACCTCAAGGTAGTATGATCGACGAAGCACTTGCCATTTTAGCTATATTGTCT
AGTCATCCAGAAGGGAAGACAACCATTGGAGCTGCAGGGGCAGTTCCTGTTTTGGTTAAT
GTGATCACAAGTGGTTCTCCCAGAAACAAAGAAAATGCAGCTGCAGTTTTGGTACACCTT
TGCTCTGGGGACCAACATTATCTAGTGGATGTTCAGGAGCTAGGAATAATGGGACCATTG
CTGGATTTAGTACAAAATGGTACTGAAAGGGGTAGACGAAAGGCAACCCAGTTGCTTGAA
CGAATAAATAGATATGCTGAACAGCAAAAACAGGCCCAGACAGAACCCGAGGCTCCGATT
CATAACCAGCTTTCAGAGTCACCACCATCATCGACAAATGTCCTGGAATGCTGA