Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g075690.3.1
CDS Infomation

auxin-regulated protein AF416289
Sequence

ATGTCGAGGACGACGGAGCTCCAAATGCACAAGAAATGGAAAGGTAGAGAAACAAGCCCT
GAACGGACCAAAGTTTGGACTGAACCTCCTAACCATAAGCTCAGCAAAGTACCCGTTGTT
TACTATCTCTCCAGAAATGGCCAACTTGAGCATCCTCATTTCATGGAAGTGCCTCTTTCC
TCCCGTGATGGTCTGTATCTCAGAGATGTGATCAACCGCTTGAATTGTCTTCGTGGAAAA
GGGATGGCCTCTATGTACTCCTGGTCTGCTAAAAGAAGCTATAGGAATGGATTCGTGTGG
CACGATTTGACAGAGAACGATTTTATATACCCAGCACATGGTCAAGAGTATGTTCTGAAA
GGATCAGAGCTTCTCGATAGCGCATTGCCTTCACAACCCGATGAAATCGCTTGTTCTAAT
TCTAGAAATACGGTGCCGGAAAAACAGAAATTGAGTGAAGATCGCGAGTTTCCTGCAGTG
GCAAGGCGCCGGAATCAGTCCTGGAGTTCCTCCGATTTCCACGAATACCTAGTTTACAAG
GCCGAATCACCCGGCGAAATACTCGGAAGAATTGGAGCCGACGCTTCAACTCAAACAGAG
GACAGACGACGCCGGCGAGGAGGAATGCGAATCGTTGAAGAAGAAGAAGAGTTGAGTGAA
AACCGGATTATTGAATCTGACTGTAAAGAACCGGACGAGGTTGAACATAGTCCGAACCAG
TCAACGGAGCTGAACAGAGGTGAAATTTCACCACCACTATCCGATTCAAGCTCTGAAACG
CTAGAAACGTTGATGAAGGCGGACGGAAAATTAATCCTACGGCCAGATACAATCAGCGAA
GATCCAACGGCTAATACTCATTCAAGCGGAAAGAGCAAAGCAGCTTCCGTTTTGATGCAA
TTACTCTATTGCGGTTCAATGTCCTTCAAGCAATGCGGACCCGGTTATGGGAAGGAAAAT
GGATTTTCCTTGATTTCACAGTATAAAAACCGTCTGTCCCATGGCAGGTGTACCAATCAA
GCGGTGAAGGATGTAGAGAGTCCAATTGTGGAATATCACGGAAGTGAAGAGAGAATTAAG
CTGGAAGATAAGGAATACTTCAGTGGGAGTTTAATAGAGATGAAGAAGAAGGAGAAATTT
CCAGCTCTAAAGAGGTCTTCTTCATACAACGTAGAACGGAGTACAAAATTGGAGCTGACT
GAGAAGCAAGAAGAAGGGAAAACAAAATGTTATCTGCGAAAGCAAAAGAACCAATCGACC
CGAGAAGAAGGAGACAGTGACTTGTCTAATGCCCTGCAGTAG

Peptide Sequence

PEP ID

Solyc06g075690.3.1
PEP Infomation

auxin-regulated protein AF416289
Sequence

MSRTTELQMHKKWKGRETSPERTKVWTEPPNHKLSKVPVVYYLSRNGQLEHPHFMEVPLS
SRDGLYLRDVINRLNCLRGKGMASMYSWSAKRSYRNGFVWHDLTENDFIYPAHGQEYVLK
GSELLDSALPSQPDEIACSNSRNTVPEKQKLSEDREFPAVARRRNQSWSSSDFHEYLVYK
AESPGEILGRIGADASTQTEDRRRRRGGMRIVEEEEELSENRIIESDCKEPDEVEHSPNQ
STELNRGEISPPLSDSSSETLETLMKADGKLILRPDTISEDPTANTHSSGKSKAASVLMQ
LLYCGSMSFKQCGPGYGKENGFSLISQYKNRLSHGRCTNQAVKDVESPIVEYHGSEERIK
LEDKEYFSGSLIEMKKKEKFPALKRSSSYNVERSTKLELTEKQEEGKTKCYLRKQKNQST
REEGDSDLSNALQ*

Transcript Sequence

Transcript ID

Solyc06g075690.3.1
Transcript Infomation

auxin-regulated protein AF416289
Sequence

TGAGCTCTTTGTTTTTCCTTTGCTTAAGCAAGGGTTACTATCTTCATAAAAAAAAAAATT
ATTCAGTATATTGAAAATTTATGTGATATCTTTTTAATTATAATTATTTATTATTGTCCT
ATTGAGCTCTTTGTTTTTCCTTTGCTTAAGCAAGGGTTACTATCTTCATAAAAAAAAAAT
TATTTCAGTATATTGAATATTTATGTGATATCTTTTTAATTATGAAAGGTAAATGATTAG
TAGTTTTTTTAAATATGTAAATTTAATTTTTAAAACTTAGATTTGTCAAAGGTGAAGTCA
ACACGTTGGCGATATTGTCATGGCGCATCCTATTTTTGAAACTCTGCTCCCTTGCTCCTT
CCATACACCGTCCACATTATTCCTTCCAGCTAGACTCTCACACATCACCTTATAAACGTG
AACCCCCGCCATTTACTCATTATGATTTTCACTGAATTCCAAGCTTTCAAATTTCAAATA
TCGAGGTTCCATTTCTTCTAACTTTCTCAAATTAAGCGGTTGGGAAGAACAATGTCGAGG
ACGACGGAGCTCCAAATGCACAAGAAATGGAAAGGTAGAGAAACAAGCCCTGAACGGACC
AAAGTTTGGACTGAACCTCCTAACCATAAGCTCAGCAAAGTACCCGTTGTTTACTATCTC
TCCAGAAATGGCCAACTTGAGCATCCTCATTTCATGGAAGTGCCTCTTTCCTCCCGTGAT
GGTCTGTATCTCAGAGATGTGATCAACCGCTTGAATTGTCTTCGTGGAAAAGGGATGGCC
TCTATGTACTCCTGGTCTGCTAAAAGAAGCTATAGGAATGGATTCGTGTGGCACGATTTG
ACAGAGAACGATTTTATATACCCAGCACATGGTCAAGAGTATGTTCTGAAAGGATCAGAG
CTTCTCGATAGCGCATTGCCTTCACAACCCGATGAAATCGCTTGTTCTAATTCTAGAAAT
ACGGTGCCGGAAAAACAGAAATTGAGTGAAGATCGCGAGTTTCCTGCAGTGGCAAGGCGC
CGGAATCAGTCCTGGAGTTCCTCCGATTTCCACGAATACCTAGTTTACAAGGCCGAATCA
CCCGGCGAAATACTCGGAAGAATTGGAGCCGACGCTTCAACTCAAACAGAGGACAGACGA
CGCCGGCGAGGAGGAATGCGAATCGTTGAAGAAGAAGAAGAGTTGAGTGAAAACCGGATT
ATTGAATCTGACTGTAAAGAACCGGACGAGGTTGAACATAGTCCGAACCAGTCAACGGAG
CTGAACAGAGGTGAAATTTCACCACCACTATCCGATTCAAGCTCTGAAACGCTAGAAACG
TTGATGAAGGCGGACGGAAAATTAATCCTACGGCCAGATACAATCAGCGAAGATCCAACG
GCTAATACTCATTCAAGCGGAAAGAGCAAAGCAGCTTCCGTTTTGATGCAATTACTCTAT
TGCGGTTCAATGTCCTTCAAGCAATGCGGACCCGGTTATGGGAAGGAAAATGGATTTTCC
TTGATTTCACAGTATAAAAACCGTCTGTCCCATGGCAGGTGTACCAATCAAGCGGTGAAG
GATGTAGAGAGTCCAATTGTGGAATATCACGGAAGTGAAGAGAGAATTAAGCTGGAAGAT
AAGGAATACTTCAGTGGGAGTTTAATAGAGATGAAGAAGAAGGAGAAATTTCCAGCTCTA
AAGAGGTCTTCTTCATACAACGTAGAACGGAGTACAAAATTGGAGCTGACTGAGAAGCAA
GAAGAAGGGAAAACAAAATGTTATCTGCGAAAGCAAAAGAACCAATCGACCCGAGAAGAA
GGAGACAGTGACTTGTCTAATGCCCTGCAGTAGCATTTGCTATTATTTCTAGTATTACTA
GCTAGTTATCAAAATGGTAGCAAGATGTTATCAAAATGGTAGCAAGATGAGTAGATGATA
GTGGTTAAGCAGTAGATTAGGGAAATGGTAGGAAAAATTGTGGAAACAATTGCTCCTGAT
CATGATCTCAGTTGTAGTTATTGTTTGTGTGGATTTCGACAGTAAAAATAACTAAATTAT
CTGTATCAAGTGTTTGCATCAAAGAAATGATATGCGAGTGCGACATACTATTGAGCCATG
ATTAATATGTTTGTTGCACCAAATCAAGAGGAAATCTGGGAACAATGAGTTCGAAACATG
GAAGTTGGAAGCAGTCAATAACCCTT