Plant GARDEN
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g075640.2.1
CDS Infomation

Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *-* AT4G20900.2)
Sequence

ATGTGGAGGAATAACGAGAGAGTCTACATGACTCCGGCGAGGGGTTTCTTGACCCCACCG
CCGAAATGGAGATCGCCGGCGACGGAAAAGGACCAGAAGTGGCCAACACATGCACAGAGT
GCTAAAGCTGATCTTTTTCACGTCATTCACAAAGTGCCTTCCGGTGATTCTCCTTATGTC
AGGGCGAAACATGTTCAATTAATTGATAAGGATCCAGGCAAGGCAGTTTCTCTGTTCTGG
GCAGCAATTAATTCCGGTGATCGAGTTGATAGTGCTCTGAAAGACATGGCAGTGGTAATG
AAACAGTTGGATCGTTCAGACGAGGCAATAGAAGCAATAAAGTCATTTCGAAATCTCTGT
CCCTCTGAGTCTCAGGAGTCCATTGACAACATCTTGATTGAACTCTACAAGAGATCTGGT
AGGCTCGAAGAAGAGATTGAATTACTTGAACTGAAATTGAAGAACGTTGAAGAAGGCATA
GCATTTGGTGGGAAGAGGACTAAGATTGCTAGATCTCAAGGAAAAAAGGTTCAAATCACA
ATTGAAAAGGAGTACGCGAGATTGTTGGGGAACTTGGCATGGTCATACATGCAACTGAAT
AACTTTAAATTGGCAGAGGAGTACTATAGAAAAGCACTCTCTCTCGAATCGGACAAGAAC
AAGCAAAGCAATCTTGCAATTTGTTTGATGCACATGAACAAGATTGCAGAAGCTAGGTTT
CTGCTTCAAAGCATAAAAACCTCAGATAGACGGCAAATGGATGAGTCATGCACCAAGTCC
TTTGAGCGTGCCACTCAAATGCTAGCTGAGTTAGAATCTCATGGCATTCAGAACTCCAAG
GAACAGGTGGAAGAGATGCGGGAGGTTAGGATAGATTCATCCACTTCAGATGAACATGAT
CGCAGGGGACACGAGAAGACACATCCACCTCCATTTACTGCTTCTGGACCTCCAAAGCAC
TTTTTGACACAGCCAAGAAGATATTCATGTTCACTCAATGATGGAGGTTGGTTGAATAAG
GACTCTGTTAGTGCCTGTAGTCGAAGATTGTTATTTGAACAAACATCAAATAATGAGAAT
GTGCAGTTAGTTGTGAATCATAATTTTAACAAGCTCATTTCTGTCAACGACATAAGCGAG
GGAGCATCCGTTGTATGTGGACAAGTGTTCTCTAGGTCATGGGGTAATGGCGCTAATGTG
AGAAGTGAATGTGATTTGCAGCCACCTTACTCCAAATGGAAAAACAACTCTTCAGGAAAT
GATGGATCAGACCAAATTTCTTTAGAGTTGTCTAGGTCTCCAACAGAATCATTGCCTGAT
ATTACAAGTGCAAGAAAATGTTCTGAAAATGGGAGTAAAGATTGTTGGAGTTCCACTTTG
ACTTATAGAGATATGGTGACATTAGAGGATACCACCGAACACTTGGACAGCACAAGCTTG
AAACCTTTAAACCTGCCTGCATGTACAAGCAAGAAGAGTTGGGCTGATATGGTGGAAGAG
GATGAGCTAGGTTTGCAATTTCATGAAACTCCAGGCAAATATTCAGATGAAAATGAGAAT
ATCGATGCAAATATTATTAATCTTAGCCAAAACATTGACACATTGTGTCTGAATGAAGGG
TATCATACACAACCTGGACGAGAAGCAAGGCGTTCCTTGTGCTTTGATCATAATGACAGA
AAAGAGAAGTGTTCATCTGGCTTTCAGGGGAAAGAGCTTAAGTCTGGAAGCTTGAACTCC
TTGCCCCCTATAGGAGACATTGCTTATCAAACTCCAGTCACGTTGATGCGGAGGAACAGA
TTGCAAGTATTCAGAGATATAACTCCTGAAAGTCCTAAACCTTGA

Peptide Sequence

PEP ID

Solyc06g075640.2.1
PEP Infomation

Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *-* AT4G20900.2)
Sequence

MWRNNERVYMTPARGFLTPPPKWRSPATEKDQKWPTHAQSAKADLFHVIHKVPSGDSPYV
RAKHVQLIDKDPGKAVSLFWAAINSGDRVDSALKDMAVVMKQLDRSDEAIEAIKSFRNLC
PSESQESIDNILIELYKRSGRLEEEIELLELKLKNVEEGIAFGGKRTKIARSQGKKVQIT
IEKEYARLLGNLAWSYMQLNNFKLAEEYYRKALSLESDKNKQSNLAICLMHMNKIAEARF
LLQSIKTSDRRQMDESCTKSFERATQMLAELESHGIQNSKEQVEEMREVRIDSSTSDEHD
RRGHEKTHPPPFTASGPPKHFLTQPRRYSCSLNDGGWLNKDSVSACSRRLLFEQTSNNEN
VQLVVNHNFNKLISVNDISEGASVVCGQVFSRSWGNGANVRSECDLQPPYSKWKNNSSGN
DGSDQISLELSRSPTESLPDITSARKCSENGSKDCWSSTLTYRDMVTLEDTTEHLDSTSL
KPLNLPACTSKKSWADMVEEDELGLQFHETPGKYSDENENIDANIINLSQNIDTLCLNEG
YHTQPGREARRSLCFDHNDRKEKCSSGFQGKELKSGSLNSLPPIGDIAYQTPVTLMRRNR
LQVFRDITPESPKP*

Transcript Sequence

Transcript ID

Solyc06g075640.2.1
Transcript Infomation

Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *-* AT4G20900.2)
Sequence

GGTAGGGTCAGGATTTTCTAATGCTACAGTAGGGGTGGCCACTTCCTCGTCAAGGATTCG
ACCTGCTGTAGCTAATGTTATTGTGAGAGCTAGAATGAGTAGGTATGAGATAACGGCTTT
GATTTGAAAAGAGCTCGAATTTTGAATTGCCATTATTAATCAAAGGAACTGATGAAATAG
TAGCTAGAACTGAGAGATAGCTTGAGAAATGATTTTCTGGAATGAAGATGATGGATAATC
AAGAACATTGATGAGAATTTATAAACGTGTGATTACAATGGAGAAAAATTGAATAGTACT
TCATTTGGTAAAATGAGAGGAGTTGATGAGATGGATTAGGTATAAACCTTTCCACCCTAA
AAAGTGTATTAGTTGAACAGTTGCAATAATTAATATTGTATCATGTACAAATAACAATCA
ACTATAAAAAGCAAATACTGACCAAAAAGAATGGGGAAAATTTGATACTGCTATGTTTGC
ATCTCTTTGCAGTGTTGAGTATCCAGCTTGGGGTCTACTATTTGATAAGGATATTCATTC
ATAAAGTTGGATTGGGGCAAATAATCTGTTAACTAGCACGCTTTATGCTAGCTATGCCTC
ATTCTATGATAAATTAACGATGCCCGTGGCGTTAATATACGTATGAGTAAAGTAAGTGAG
TTACGTTTATCAACGATCATGTTTTAAAAAATAATTAAGATAAAAAAATAGTTTAGTTTT
GAACCGATTGAATAAAAGGAGTAAAGTTTGGTGGATCCCCGAGTAATTAAGTCAAGCTTG
AAAGAGGAGATTTATTATTGAAATTAAACAAAATTAAAGGATTAAAAATGAAAACGAGCC
CTCAAATTTCCTCCTAATTTCTACGTTTAGGTTAATTTGGAGTGTGCACGTGACTTGCAC
ATGCTAACTAAATTGCTTGCGTCTCCTCTGTCAACGGATACCTTATATTTAACGGCTAGT
TTGTTCGTAATCGAACGCTTTCACTTACTCTCTCTTTCCGGCAAGAGAAAGTAGCTTTAT
TTTTTCTTCTTTTTCCAATATTAATACAACTTTCTTAGTGATCAAAGTAGAAAAAGAATT
GATCACTCCATCTTTTTAACGAAAACAAGTGTCTCACTCACAGTTCATCTCCCAAGAATT
CACAAACCAATTGTGAAAATCAAATTAACAATATTAATATTAGTATAGTTAATTTGAATC
AAGATTTTACTTTTTTTTTTTTGCAATTTTCGGTAAAGGGTTTTGCGTAAGAATCAATGT
GGAGGAATAACGAGAGAGTCTACATGACTCCGGCGAGGGGTTTCTTGACCCCACCGCCGA
AATGGAGATCGCCGGCGACGGAAAAGGACCAGAAGTGGCCAACACATGCACAGAGTGCTA
AAGCTGATCTTTTTCACGTCATTCACAAAGTGCCTTCCGGTGATTCTCCTTATGTCAGGG
CGAAACATGTTCAATTAATTGATAAGGATCCAGGCAAGGCAGTTTCTCTGTTCTGGGCAG
CAATTAATTCCGGTGATCGAGTTGATAGTGCTCTGAAAGACATGGCAGTGGTAATGAAAC
AGTTGGATCGTTCAGACGAGGCAATAGAAGCAATAAAGTCATTTCGAAATCTCTGTCCCT
CTGAGTCTCAGGAGTCCATTGACAACATCTTGATTGAACTCTACAAGAGATCTGGTAGGC
TCGAAGAAGAGATTGAATTACTTGAACTGAAATTGAAGAACGTTGAAGAAGGCATAGCAT
TTGGTGGGAAGAGGACTAAGATTGCTAGATCTCAAGGAAAAAAGGTTCAAATCACAATTG
AAAAGGAGTACGCGAGATTGTTGGGGAACTTGGCATGGTCATACATGCAACTGAATAACT
TTAAATTGGCAGAGGAGTACTATAGAAAAGCACTCTCTCTCGAATCGGACAAGAACAAGC
AAAGCAATCTTGCAATTTGTTTGATGCACATGAACAAGATTGCAGAAGCTAGGTTTCTGC
TTCAAAGCATAAAAACCTCAGATAGACGGCAAATGGATGAGTCATGCACCAAGTCCTTTG
AGCGTGCCACTCAAATGCTAGCTGAGTTAGAATCTCATGGCATTCAGAACTCCAAGGAAC
AGGTGGAAGAGATGCGGGAGGTTAGGATAGATTCATCCACTTCAGATGAACATGATCGCA
GGGGACACGAGAAGACACATCCACCTCCATTTACTGCTTCTGGACCTCCAAAGCACTTTT
TGACACAGCCAAGAAGATATTCATGTTCACTCAATGATGGAGGTTGGTTGAATAAGGACT
CTGTTAGTGCCTGTAGTCGAAGATTGTTATTTGAACAAACATCAAATAATGAGAATGTGC
AGTTAGTTGTGAATCATAATTTTAACAAGCTCATTTCTGTCAACGACATAAGCGAGGGAG
CATCCGTTGTATGTGGACAAGTGTTCTCTAGGTCATGGGGTAATGGCGCTAATGTGAGAA
GTGAATGTGATTTGCAGCCACCTTACTCCAAATGGAAAAACAACTCTTCAGGAAATGATG
GATCAGACCAAATTTCTTTAGAGTTGTCTAGGTCTCCAACAGAATCATTGCCTGATATTA
CAAGTGCAAGAAAATGTTCTGAAAATGGGAGTAAAGATTGTTGGAGTTCCACTTTGACTT
ATAGAGATATGGTGACATTAGAGGATACCACCGAACACTTGGACAGCACAAGCTTGAAAC
CTTTAAACCTGCCTGCATGTACAAGCAAGAAGAGTTGGGCTGATATGGTGGAAGAGGATG
AGCTAGGTTTGCAATTTCATGAAACTCCAGGCAAATATTCAGATGAAAATGAGAATATCG
ATGCAAATATTATTAATCTTAGCCAAAACATTGACACATTGTGTCTGAATGAAGGGTATC
ATACACAACCTGGACGAGAAGCAAGGCGTTCCTTGTGCTTTGATCATAATGACAGAAAAG
AGAAGTGTTCATCTGGCTTTCAGGGGAAAGAGCTTAAGTCTGGAAGCTTGAACTCCTTGC
CCCCTATAGGAGACATTGCTTATCAAACTCCAGTCACGTTGATGCGGAGGAACAGATTGC
AAGTATTCAGAGATATAACTCCTGAAAGTCCTAAACCTTGAGCCTATTATCATGTACAGA
AATAAATAGTCATTCCAAATGCTTTAGGTTTAGTGTACTTGTTAGCTAGCTGATCTTATG
ATCATTTTAATACTGCAAGACCTATTATGCTTAGCCTTGAGAAATAAGTGTTGGTAAGTG
TATACAATTTTTCTTCTATATCTTATTTTTCTCTGAACATACCATTTTGCCTGATATCCA
TTGTGCTAGATTGAGTTAGCTTAAGTGAATAGATTCACCTTCTGGCTTCTTCATAGTTGT
CTTACTTG