Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g074870.2.1
CDS Infomation	Sister chromatid cohesion 1 protein 1 (AHRD V3.3 *** A0A0B2RVU6_GLYSO)
Sequence	ATGGAGCGAAACATTATTGCAGCTGATGAGATCCCTGACAGACATCCAGAGGACCAAGTG AAGCAACAATCTGATGAAGTTAAAGAAGCTTTTGAGGTAGAAACTCCACAAGCAACCAAG CTAGAAAATAATCGGCAGGATCAACAAAGGCCAAAGCCAGCTCGACGAAGAACAAGAAAG GCCACAAGTCTTGCAATTGATCATGAGCAAACTATTATTTCTGGTGACATATATCAATCC TGGCTTCAGAGTTCTTCAGATATTGCATCAAGAAAAAGGAAAAAGAGAAAGACTTTGAGT GTCTTACCTTCTATGAAGATAGCCAGAATGATGGAAATGCCTCCTATTGCACTACTAGAA GGATTGTTCACAAATGGAAATAAGGAAGTTCACTATCCAGCACCACTCCTAAAATTATGG ATGAGGAATACCCAACCTCCGCATGATTCACCTTCCGGAAAAACCTCTCCACCCTTTCCT CCTGAACCATCCTATACATCTCCAGGTGAAAGGATGGGTAATTTGGAACCGCCTTTCGAA TATTTCCAAGGCGGTGTAGGCTCCCCAGCAGTAGGAATCTCTATAGAAAAACAAAGGGCA AATCTCAACAATAACAAGATTCCACCTGAAATTCTCATGGAGGACCTCAGAACCAATCTT ACAAATATGGGACTGCATCCAACAGAGACTAATGGAGTGAAAGAGACTGATCACATGGCC ACACCTGGCTCTGGTGATGAGCCTAGATCCATTCCAAGCTCAGGATCTGGTCATGGTTTA CTATCACAGAATTCTGTAACCGATTCAAGTCGGTCCAACAAGAAAAGACCCCATTCTTCA TTGAAGCACAGTGGCAATGGTCTTCAACCAGTAGCAGAAGAGAACCCATGGCACGACCCC ACTCTAAATTTCAAGTTGACTAGATTATCTGAACTATCTGAAAATGGTTTTACACAAGAC AACGTTTGTTATGAACCTCCCTTCACTATTTTGGCAGAGATATTGATGGAAACCGGACCA ACACAAACCCAACATCCATTCATTACTCAACCTCTTGACATGATGACTGACTCTATCAGG ATACAGCTAAAGAGTCATTTTGACACTCCCGGATCGGCAGAAGCAGAATGTTTGAATGAA CTAACTCTTGGAATGACAAAGAAACAAGCAGCATGTCTTTTTTATCAGACTTGTGCTCAG AGAAACTTCATAGTTTCCAGCTTCTCATTAGAGAGAATTAATGTTTGCTCCATTCTACGT GCAGTTCTGGCCACTCGAGACTTTGTTAAAGTCGAACAGGAGCTTCCATATGGAAACATC CTCATTTCCAGAGGTGCAAAGATGTATTGGAGAATTGAGGCACAGATTTATAGCTCAAAT TTTCAGGAGAAACATTTGGTGACAGCTAAAAACTATGGGCTTCCTTTGTTTGATCTTTAT AAAAACGGGTCAGGATATTTTTCTTACCAAAAATTAAAAAACCACCCAAAAATAGGCATT CGTGCCAATGACCCACGCCACTTCCGCCCGGCTCTCATTGTTTCCGACGGCGACATGGCA ATGACGATGACCACTGCAATGGCATCGCCGTCGCGGCGGCTGCTTATCAACTCTCGACAT AGCACCATCTGCACTATCCCCAAGAATGTGGCAATTTACCCAGCAGCAGCAGTTACAAAT CAGGGGTTATTGAAGCACTGTATATCCTCGCAAAGATGCCTAAGATCTCTGGTAAAACCA GTATCGGCTGCTAGTTCAGGTTTTGAGGCAGATTTGGGTGACGATGAATCTCTGATACGC GTTAAAAATGCAAAGATAGCTGTTGAGTCCGAAGACGATGAGAAGATACAAGTGAGAGTA GATGTGAGCGAAGAGGACACAAAAACGGTTTTCGAAAAAGTATTGACAAATTTAGCAAAA TCAGCGCCCCCTGTTCCAGGTTTCCGCAGGGAAAAAGGAGGGAAAACATCCAAGGTTCCC AAGGACTTTCTACTGCAGATACTTGGTGAAGACCGAGTTACCAATTTTGTAATACGAGAA ATTGTTACCTCAACTCTTGCTGATTATGTGAAGAAGGAGAATTTGGCAGTAAAGGATAAC AAGATTAGCACCACACAAACTGCCGATGAACTCAAGTCATCATTTGTTCCGGGAACAGAA TTCAGATTCAATGCCACCTTAGAGCTTGAAAAATCAAAAACTGAAGCCTCCACATAA

Peptide Sequence

PEP ID	Solyc06g074870.2.1
PEP Infomation	Sister chromatid cohesion 1 protein 1 (AHRD V3.3 *** A0A0B2RVU6_GLYSO)
Sequence	MERNIIAADEIPDRHPEDQVKQQSDEVKEAFEVETPQATKLENNRQDQQRPKPARRRTRK ATSLAIDHEQTIISGDIYQSWLQSSSDIASRKRKKRKTLSVLPSMKIARMMEMPPIALLE GLFTNGNKEVHYPAPLLKLWMRNTQPPHDSPSGKTSPPFPPEPSYTSPGERMGNLEPPFE YFQGGVGSPAVGISIEKQRANLNNNKIPPEILMEDLRTNLTNMGLHPTETNGVKETDHMA TPGSGDEPRSIPSSGSGHGLLSQNSVTDSSRSNKKRPHSSLKHSGNGLQPVAEENPWHDP TLNFKLTRLSELSENGFTQDNVCYEPPFTILAEILMETGPTQTQHPFITQPLDMMTDSIR IQLKSHFDTPGSAEAECLNELTLGMTKKQAACLFYQTCAQRNFIVSSFSLERINVCSILR AVLATRDFVKVEQELPYGNILISRGAKMYWRIEAQIYSSNFQEKHLVTAKNYGLPLFDLY KNGSGYFSYQKLKNHPKIGIRANDPRHFRPALIVSDGDMAMTMTTAMASPSRRLLINSRH STICTIPKNVAIYPAAAVTNQGLLKHCISSQRCLRSLVKPVSAASSGFEADLGDDESLIR VKNAKIAVESEDDEKIQVRVDVSEEDTKTVFEKVLTNLAKSAPPVPGFRREKGGKTSKVP KDFLLQILGEDRVTNFVIREIVTSTLADYVKKENLAVKDNKISTTQTADELKSSFVPGTE FRFNATLELEKSKTEAST*

Transcript Sequence

Transcript ID	Solyc06g074870.2.1
Transcript Infomation	Sister chromatid cohesion 1 protein 1 (AHRD V3.3 *** A0A0B2RVU6_GLYSO)
Sequence	ATGGAGCGAAACATTATTGCAGCTGATGAGATCCCTGACAGACATCCAGAGGACCAAGTG AAGCAACAATCTGATGAAGTTAAAGAAGCTTTTGAGGTAGAAACTCCACAAGCAACCAAG CTAGAAAATAATCGGCAGGATCAACAAAGGCCAAAGCCAGCTCGACGAAGAACAAGAAAG GCCACAAGTCTTGCAATTGATCATGAGCAAACTATTATTTCTGGTGACATATATCAATCC TGGCTTCAGAGTTCTTCAGATATTGCATCAAGAAAAAGGAAAAAGAGAAAGACTTTGAGT GTCTTACCTTCTATGAAGATAGCCAGAATGATGGAAATGCCTCCTATTGCACTACTAGAA GGATTGTTCACAAATGGAAATAAGGAAGTTCACTATCCAGCACCACTCCTAAAATTATGG ATGAGGAATACCCAACCTCCGCATGATTCACCTTCCGGAAAAACCTCTCCACCCTTTCCT CCTGAACCATCCTATACATCTCCAGGTGAAAGGATGGGTAATTTGGAACCGCCTTTCGAA TATTTCCAAGGCGGTGTAGGCTCCCCAGCAGTAGGAATCTCTATAGAAAAACAAAGGGCA AATCTCAACAATAACAAGATTCCACCTGAAATTCTCATGGAGGACCTCAGAACCAATCTT ACAAATATGGGACTGCATCCAACAGAGACTAATGGAGTGAAAGAGACTGATCACATGGCC ACACCTGGCTCTGGTGATGAGCCTAGATCCATTCCAAGCTCAGGATCTGGTCATGGTTTA CTATCACAGAATTCTGTAACCGATTCAAGTCGGTCCAACAAGAAAAGACCCCATTCTTCA TTGAAGCACAGTGGCAATGGTCTTCAACCAGTAGCAGAAGAGAACCCATGGCACGACCCC ACTCTAAATTTCAAGTTGACTAGATTATCTGAACTATCTGAAAATGGTTTTACACAAGAC AACGTTTGTTATGAACCTCCCTTCACTATTTTGGCAGAGATATTGATGGAAACCGGACCA ACACAAACCCAACATCCATTCATTACTCAACCTCTTGACATGATGACTGACTCTATCAGG ATACAGCTAAAGAGTCATTTTGACACTCCCGGATCGGCAGAAGCAGAATGTTTGAATGAA CTAACTCTTGGAATGACAAAGAAACAAGCAGCATGTCTTTTTTATCAGACTTGTGCTCAG AGAAACTTCATAGTTTCCAGCTTCTCATTAGAGAGAATTAATGTTTGCTCCATTCTACGT GCAGTTCTGGCCACTCGAGACTTTGTTAAAGTCGAACAGGAGCTTCCATATGGAAACATC CTCATTTCCAGAGGTGCAAAGATGTATTGGAGAATTGAGGCACAGATTTATAGCTCAAAT TTTCAGGAGAAACATTTGGTGACAGCTAAAAACTATGGGCTTCCTTTGTTTGATCTTTAT AAAAACGGGTCAGGATATTTTTCTTACCAAAAATTAAAAAACCACCCAAAAATAGGCATT CGTGCCAATGACCCACGCCACTTCCGCCCGGCTCTCATTGTTTCCGACGGCGACATGGCA ATGACGATGACCACTGCAATGGCATCGCCGTCGCGGCGGCTGCTTATCAACTCTCGACAT AGCACCATCTGCACTATCCCCAAGAATGTGGCAATTTACCCAGCAGCAGCAGTTACAAAT CAGGGGTTATTGAAGCACTGTATATCCTCGCAAAGATGCCTAAGATCTCTGGTAAAACCA GTATCGGCTGCTAGTTCAGGTTTTGAGGCAGATTTGGGTGACGATGAATCTCTGATACGC GTTAAAAATGCAAAGATAGCTGTTGAGTCCGAAGACGATGAGAAGATACAAGTGAGAGTA GATGTGAGCGAAGAGGACACAAAAACGGTTTTCGAAAAAGTATTGACAAATTTAGCAAAA TCAGCGCCCCCTGTTCCAGGTTTCCGCAGGGAAAAAGGAGGGAAAACATCCAAGGTTCCC AAGGACTTTCTACTGCAGATACTTGGTGAAGACCGAGTTACCAATTTTGTAATACGAGAA ATTGTTACCTCAACTCTTGCTGATTATGTGAAGAAGGAGAATTTGGCAGTAAAGGATAAC AAGATTAGCACCACACAAACTGCCGATGAACTCAAGTCATCATTTGTTCCGGGAACAGAA TTCAGATTCAATGCCACCTTAGAGCTTGAAAAATCAAAAACTGAAGCCTCCACATAA