Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g074810.3.1
CDS Infomation	Protein SMG8 (AHRD V3.3 *** A0A0B0MQ28_GOSAR)
Sequence	ATGGACTCCTCAAAACCAAATCCTCAGTCCATGCGAGTCCTAATTCGACCTCCAATACCA CCTTCTCATTCTCAAACTCCCTCAGTACTTCCTAGCCACGCCCAAGCTCCGGCTCCTTCT CCCCACCCACTTCCATCAACCTCATCGGAAGCACCAGCCACCTCTCCCTCTCCATTAAAC CCTCAAAGCGGTGTCGTTGTGGTTGGTTTTATTGGAAAACGCCACGATGACGTTGCTTAC CTGATGAACCGGATTATTGATTCTAATGTGTTCGGTTCCGGGGGTTTAGATAAGCCAATT TTTGTTAATAAACCGGATGAGAAGACGAATTTTGCTGTAACCGACGATATGAAGAGCTGG TTTGAGTTTAGGAATATAAGCTACCATCATGATGAGGAAAAGGGGATTTTGTTTTTGCAA TTATCTTCAACTCGATGCCCTCTGATGGAAGGCAACTTGGAGTCTAAGATGGGATTTGAT TCACTGTTGGAAGACTATGAATATGGCGATCTCCAAGCTATGCTCTTTATGTTCTCTGTT TGCCATGTTGTAGTATTTATCCAAGAAGGGCCACGATTTGACACCCAGATACTGAAGAAA CTTCGCGTCTTGCAAGCAGCTAAACAAGCAATGGCTCCATTTGTTAAGTCACAATCTCTG TCACCCTCTGTATCTGGCTCACCTTTTGCATCTCCATCACGTAGAGCTACATCAGGAAGA TCATCTGACAATCCTTCGCCTGTCAAAAGCCGTGGCATTTTCAACCGAAATAATTCAGCA ATTACTCTGATGTCAGGTTTAGGTTCATATACCTCTTTATTACCCGGGCAGTGTACTCCG GTAACACTTTTTGTTTTTCTTGATGATTTTGCTGATGATTATCCTAGTTCTAGTGTTGAG GAGCCAGGTGATATTTCCTCAGCGAATCAATCATCAAGTGTTGGTGCCTCGGCTCGACCA AGCTTGGCTCCAAAAGTTTCTGGTTCTGTGGTTGTGCTTGCACGCCCTATGAGTAAATCT GAAGGTGGGTTTAGGAAGAAATTGCAGTCTTCTCTGGAGGCACAGATCCGATTCTCCATT AAGAAATGCCGGACACTGTCAGGTTCTGAAACTGGTCATACAGGTTCAAGAAGTGGGGGT GTGTCAAATTCTGCAATGCTGTTTTCCCTGGATGCATCAAAGGCTGTTGCACTTTTAGAT ATAACCTCTAATAAGAGAGGTGAATCCCTTGAATTTGCCACTGGCCTTGTGGAAGATGTT CTGAATGGAAAAGCAACCTCAGATTCTCTTCTATTTGAAAGTCATAGCCAGAGCGCAAAT AGAGAAGACTTACTTTCTATCAAGGAGTTCATCTGCAGGCAGACTGATATATTAAGAGGA AGAGGGGGTGTGGTTTCGAATACTAATAGTGGTCCAGCTTCTGGTGTTGGCATGGTTGCT GTTGCTGCTGCAGCAGCAGCTGCTTCTGCTGCTTCTGGAAAGACATTTACTTCTCCTGAA CTTCCACATTTGGAGAAATGGTTATCTTCTAGTCAGCATATTCTGCAAGCAATCCTGTCA GCAAAAGATGCCATTGCAGATGAGACTGAAATTAGTAAGAGGAGGCAAAGAAATTCTATT TCACCACCTCTTGAAGGAAATGCTTCAAAAGTTTCAGATCCACTTGAAATTGCAATGTCT AATTTGGCAAGTGGTAGAGGGATAAATACTAGGTTTTCTACTCTATGGTGCCAAAAGGCC CTTCCAGTAGCTAAGGAGACATATTTGAATGAGTTGCCTTCGTGCTACCCAACTTCTCAG CATAAGGCCCATTTGGAGAGAGCTCTGCATGCTTTCAATTCAATGGTCAAGGGACCTGCT GTGCAGTTATACTTGCAGAAACTGGAAGAGGAATGCACATTCATCTGGACTTCTGGCAGG CAACTATGTGATGCTGTTAGCCTCACAGGAAAACCATGCATGCACCAAAGGCATGATGTA GAAACTGGTGGTTTATGTTCAAGTGATGATATTAAGATACATTCCAGTGGGTATGACTTC CTCCATGCATGTGCATGTGGTCGTTCAAGACTCCTGCGGCCAGATCCTTTTGATTTTGAA ACCGCAAATGTCACTTTTAACCGTTCCATGGACTGTGACAAGCTTCTTCCCACAATTCAG TTACCCCAAGGAAGTGATACAAGTGGGCCCATTCATTCCCTAGCTTGGAGTTTAATCCGA GTTGGGAATGCAAGATACTACCAGCCGTCTAAAGGTTTGATGCAGAGTGGCTTCAGTTCT ACCCAAAAGTTTCTTCTAAGGTGGACTATCCTTCTCGAGAAGCCTAAATATGAGAATGGC CTACTATCAAGCAATTCAGAGCAAGCAAATATAAATAGGTTTGGTAGCAATGCCAGGGAT GAGCCTAACACAGATTCAGGCATAGAGAAGGCTGGCGATTTGAATATGCAAAATGGATAT CAAATCCAAAAGAAGTCTTCTGCAGGAAATGTCAAAACAGATGATAAAGTAAATAATTTA GGTAAAGGAGTTTCCAACTTTAATATGAGAAAAGCTTTTTCTGAGGTGGTAGCTGGTTCA ACTGCTGCAAATTCAGGATTCCCCCCGCTACAATCAAATAGACAAATTATGTCAAATTCA GAAAAGAGTATTAAGACAAAAAGTGCGAGAGAAGGAGGTAGAGAGAAGGTTAATGGGATT AGTGTTGAACAAGATTTGGAAAAAGTTGCTCTAACTCCTGCTATTCATGAAGTTAAGAAT GATTGCACTATTGTTTCTAATGATGTCACCAAGGGTAACCAAATATTCCAGATAGGTACA CATTTGGATTCAATGAAGATGAATAGAATTCAGAAGACCAGACCAGTTACCTCTTCTAAA CATGCAACAGTTTACATTGGATTTGAGCATGAGTGCCCCCATGGGCACCGTTTTATATTA ACTGCAGACCATCTCAACAGACTAGGTCCTCCTTATGCATTGCCTGTAGAATCCGCTGTC GCTTCATCTTTGGAAAATATAGATCATAAGGGGGTAGGTCCCTTCCGAGGGGGCAAGAAT GGTGGCCATGGCAAAGGTCGCCGGCTGGCAAATGGGATGATTTCTACTACCTCTAGGAAA CTCAGGAATCTGGAAAAGTCAAATGAGGGGTCAGATGATGCAATTTCAAACATAGAAGGG CCAGCTCAGTTTTCCAGGCATCCAGTACATGCTGCACCAGGAAAAGATCTTGAAACTGGT CTTCAACCTTTAAATCTCAATGACTCTGGCTATGCTACCTCCTTGTTAGATAGAAATTTG CCCATATACATGAACTGCCCCCATTGCATGGAGTTGAAGAGTAAGAATGACCAAACAGAT GCGAGATTTGCAGGAACCATTTCACAGCTCCAGAGGATCTTTCTGGTTACGCCTCACTTC CCTATCATTTTAGCAGCAAACCCAGTCATACAGTTTGAGGAGTCATGTCTTCCTCCATCT GTGCCAGACCGTAAAAAGAAGTTGCAGTTTTGTCTTGGATGTCGAGTAATTTTACCCCCT GAGAGTTTTCTTTCACTTCGACTACCTTTTATTTATGGTGTACAGCTGGAAAATGGAAAC CTCCATCCTCTCATGCCTTTTGAACAGCAGCCTGAACTCACTGCCTGGATAACCAAAGGG ACAACTTTGCAGCTTGTATCCAAGGATCGTATTCATGAGGAGCTTTTCACATAG

Peptide Sequence

PEP ID	Solyc06g074810.3.1
PEP Infomation	Protein SMG8 (AHRD V3.3 *** A0A0B0MQ28_GOSAR)
Sequence	MDSSKPNPQSMRVLIRPPIPPSHSQTPSVLPSHAQAPAPSPHPLPSTSSEAPATSPSPLN PQSGVVVVGFIGKRHDDVAYLMNRIIDSNVFGSGGLDKPIFVNKPDEKTNFAVTDDMKSW FEFRNISYHHDEEKGILFLQLSSTRCPLMEGNLESKMGFDSLLEDYEYGDLQAMLFMFSV CHVVVFIQEGPRFDTQILKKLRVLQAAKQAMAPFVKSQSLSPSVSGSPFASPSRRATSGR SSDNPSPVKSRGIFNRNNSAITLMSGLGSYTSLLPGQCTPVTLFVFLDDFADDYPSSSVE EPGDISSANQSSSVGASARPSLAPKVSGSVVVLARPMSKSEGGFRKKLQSSLEAQIRFSI KKCRTLSGSETGHTGSRSGGVSNSAMLFSLDASKAVALLDITSNKRGESLEFATGLVEDV LNGKATSDSLLFESHSQSANREDLLSIKEFICRQTDILRGRGGVVSNTNSGPASGVGMVA VAAAAAAASAASGKTFTSPELPHLEKWLSSSQHILQAILSAKDAIADETEISKRRQRNSI SPPLEGNASKVSDPLEIAMSNLASGRGINTRFSTLWCQKALPVAKETYLNELPSCYPTSQ HKAHLERALHAFNSMVKGPAVQLYLQKLEEECTFIWTSGRQLCDAVSLTGKPCMHQRHDV ETGGLCSSDDIKIHSSGYDFLHACACGRSRLLRPDPFDFETANVTFNRSMDCDKLLPTIQ LPQGSDTSGPIHSLAWSLIRVGNARYYQPSKGLMQSGFSSTQKFLLRWTILLEKPKYENG LLSSNSEQANINRFGSNARDEPNTDSGIEKAGDLNMQNGYQIQKKSSAGNVKTDDKVNNL GKGVSNFNMRKAFSEVVAGSTAANSGFPPLQSNRQIMSNSEKSIKTKSAREGGREKVNGI SVEQDLEKVALTPAIHEVKNDCTIVSNDVTKGNQIFQIGTHLDSMKMNRIQKTRPVTSSK HATVYIGFEHECPHGHRFILTADHLNRLGPPYALPVESAVASSLENIDHKGVGPFRGGKN GGHGKGRRLANGMISTTSRKLRNLEKSNEGSDDAISNIEGPAQFSRHPVHAAPGKDLETG LQPLNLNDSGYATSLLDRNLPIYMNCPHCMELKSKNDQTDARFAGTISQLQRIFLVTPHF PIILAANPVIQFEESCLPPSVPDRKKKLQFCLGCRVILPPESFLSLRLPFIYGVQLENGN LHPLMPFEQQPELTAWITKGTTLQLVSKDRIHEELFT*

Transcript Sequence

Transcript ID	Solyc06g074810.3.1
Transcript Infomation	Protein SMG8 (AHRD V3.3 *** A0A0B0MQ28_GOSAR)
Sequence	TATTCTCACCGCCGGCCGCCAACTCCGACCGCCGTCGACTGATGCATAGAGCCGTTTCTG CTTAGAGTCAAGAGGACATTGGTTGCCGATTTTAGGTTTGATGGAGATACTGTTAATTTT ATAGGCCAAGTACACAGGTGATTCTGTCTGCTATCGGTTTCCATGGACTCCTCAAAACCA AATCCTCAGTCCATGCGAGTCCTAATTCGACCTCCAATACCACCTTCTCATTCTCAAACT CCCTCAGTACTTCCTAGCCACGCCCAAGCTCCGGCTCCTTCTCCCCACCCACTTCCATCA ACCTCATCGGAAGCACCAGCCACCTCTCCCTCTCCATTAAACCCTCAAAGCGGTGTCGTT GTGGTTGGTTTTATTGGAAAACGCCACGATGACGTTGCTTACCTGATGAACCGGATTATT GATTCTAATGTGTTCGGTTCCGGGGGTTTAGATAAGCCAATTTTTGTTAATAAACCGGAT GAGAAGACGAATTTTGCTGTAACCGACGATATGAAGAGCTGGTTTGAGTTTAGGAATATA AGCTACCATCATGATGAGGAAAAGGGGATTTTGTTTTTGCAATTATCTTCAACTCGATGC CCTCTGATGGAAGGCAACTTGGAGTCTAAGATGGGATTTGATTCACTGTTGGAAGACTAT GAATATGGCGATCTCCAAGCTATGCTCTTTATGTTCTCTGTTTGCCATGTTGTAGTATTT ATCCAAGAAGGGCCACGATTTGACACCCAGATACTGAAGAAACTTCGCGTCTTGCAAGCA GCTAAACAAGCAATGGCTCCATTTGTTAAGTCACAATCTCTGTCACCCTCTGTATCTGGC TCACCTTTTGCATCTCCATCACGTAGAGCTACATCAGGAAGATCATCTGACAATCCTTCG CCTGTCAAAAGCCGTGGCATTTTCAACCGAAATAATTCAGCAATTACTCTGATGTCAGGT TTAGGTTCATATACCTCTTTATTACCCGGGCAGTGTACTCCGGTAACACTTTTTGTTTTT CTTGATGATTTTGCTGATGATTATCCTAGTTCTAGTGTTGAGGAGCCAGGTGATATTTCC TCAGCGAATCAATCATCAAGTGTTGGTGCCTCGGCTCGACCAAGCTTGGCTCCAAAAGTT TCTGGTTCTGTGGTTGTGCTTGCACGCCCTATGAGTAAATCTGAAGGTGGGTTTAGGAAG AAATTGCAGTCTTCTCTGGAGGCACAGATCCGATTCTCCATTAAGAAATGCCGGACACTG TCAGGTTCTGAAACTGGTCATACAGGTTCAAGAAGTGGGGGTGTGTCAAATTCTGCAATG CTGTTTTCCCTGGATGCATCAAAGGCTGTTGCACTTTTAGATATAACCTCTAATAAGAGA GGTGAATCCCTTGAATTTGCCACTGGCCTTGTGGAAGATGTTCTGAATGGAAAAGCAACC TCAGATTCTCTTCTATTTGAAAGTCATAGCCAGAGCGCAAATAGAGAAGACTTACTTTCT ATCAAGGAGTTCATCTGCAGGCAGACTGATATATTAAGAGGAAGAGGGGGTGTGGTTTCG AATACTAATAGTGGTCCAGCTTCTGGTGTTGGCATGGTTGCTGTTGCTGCTGCAGCAGCA GCTGCTTCTGCTGCTTCTGGAAAGACATTTACTTCTCCTGAACTTCCACATTTGGAGAAA TGGTTATCTTCTAGTCAGCATATTCTGCAAGCAATCCTGTCAGCAAAAGATGCCATTGCA GATGAGACTGAAATTAGTAAGAGGAGGCAAAGAAATTCTATTTCACCACCTCTTGAAGGA AATGCTTCAAAAGTTTCAGATCCACTTGAAATTGCAATGTCTAATTTGGCAAGTGGTAGA GGGATAAATACTAGGTTTTCTACTCTATGGTGCCAAAAGGCCCTTCCAGTAGCTAAGGAG ACATATTTGAATGAGTTGCCTTCGTGCTACCCAACTTCTCAGCATAAGGCCCATTTGGAG AGAGCTCTGCATGCTTTCAATTCAATGGTCAAGGGACCTGCTGTGCAGTTATACTTGCAG AAACTGGAAGAGGAATGCACATTCATCTGGACTTCTGGCAGGCAACTATGTGATGCTGTT AGCCTCACAGGAAAACCATGCATGCACCAAAGGCATGATGTAGAAACTGGTGGTTTATGT TCAAGTGATGATATTAAGATACATTCCAGTGGGTATGACTTCCTCCATGCATGTGCATGT GGTCGTTCAAGACTCCTGCGGCCAGATCCTTTTGATTTTGAAACCGCAAATGTCACTTTT AACCGTTCCATGGACTGTGACAAGCTTCTTCCCACAATTCAGTTACCCCAAGGAAGTGAT ACAAGTGGGCCCATTCATTCCCTAGCTTGGAGTTTAATCCGAGTTGGGAATGCAAGATAC TACCAGCCGTCTAAAGGTTTGATGCAGAGTGGCTTCAGTTCTACCCAAAAGTTTCTTCTA AGGTGGACTATCCTTCTCGAGAAGCCTAAATATGAGAATGGCCTACTATCAAGCAATTCA GAGCAAGCAAATATAAATAGGTTTGGTAGCAATGCCAGGGATGAGCCTAACACAGATTCA GGCATAGAGAAGGCTGGCGATTTGAATATGCAAAATGGATATCAAATCCAAAAGAAGTCT TCTGCAGGAAATGTCAAAACAGATGATAAAGTAAATAATTTAGGTAAAGGAGTTTCCAAC TTTAATATGAGAAAAGCTTTTTCTGAGGTGGTAGCTGGTTCAACTGCTGCAAATTCAGGA TTCCCCCCGCTACAATCAAATAGACAAATTATGTCAAATTCAGAAAAGAGTATTAAGACA AAAAGTGCGAGAGAAGGAGGTAGAGAGAAGGTTAATGGGATTAGTGTTGAACAAGATTTG GAAAAAGTTGCTCTAACTCCTGCTATTCATGAAGTTAAGAATGATTGCACTATTGTTTCT AATGATGTCACCAAGGGTAACCAAATATTCCAGATAGGTACACATTTGGATTCAATGAAG ATGAATAGAATTCAGAAGACCAGACCAGTTACCTCTTCTAAACATGCAACAGTTTACATT GGATTTGAGCATGAGTGCCCCCATGGGCACCGTTTTATATTAACTGCAGACCATCTCAAC AGACTAGGTCCTCCTTATGCATTGCCTGTAGAATCCGCTGTCGCTTCATCTTTGGAAAAT ATAGATCATAAGGGGGTAGGTCCCTTCCGAGGGGGCAAGAATGGTGGCCATGGCAAAGGT CGCCGGCTGGCAAATGGGATGATTTCTACTACCTCTAGGAAACTCAGGAATCTGGAAAAG TCAAATGAGGGGTCAGATGATGCAATTTCAAACATAGAAGGGCCAGCTCAGTTTTCCAGG CATCCAGTACATGCTGCACCAGGAAAAGATCTTGAAACTGGTCTTCAACCTTTAAATCTC AATGACTCTGGCTATGCTACCTCCTTGTTAGATAGAAATTTGCCCATATACATGAACTGC CCCCATTGCATGGAGTTGAAGAGTAAGAATGACCAAACAGATGCGAGATTTGCAGGAACC ATTTCACAGCTCCAGAGGATCTTTCTGGTTACGCCTCACTTCCCTATCATTTTAGCAGCA AACCCAGTCATACAGTTTGAGGAGTCATGTCTTCCTCCATCTGTGCCAGACCGTAAAAAG AAGTTGCAGTTTTGTCTTGGATGTCGAGTAATTTTACCCCCTGAGAGTTTTCTTTCACTT CGACTACCTTTTATTTATGGTGTACAGCTGGAAAATGGAAACCTCCATCCTCTCATGCCT TTTGAACAGCAGCCTGAACTCACTGCCTGGATAACCAAAGGGACAACTTTGCAGCTTGTA TCCAAGGATCGTATTCATGAGGAGCTTTTCACATAGTCCAATGGATGAGGTCTAATCTAG ATGGTGCTGACTGAATTTTACTAAGCATCTTGAGCAGCAACTCTTGGACTGTTCTCTGCC ATCAGATGCTTGCAGGATAACCATCTAAGTTTTATTCGTTGTAAAGCTGGGAAGGCAATT GCCCAAATACATGGGAAGAGAGAAGAAAGTTTCCTCCACTTAGGTGGTGATAAGCAGACT CGGTGATAAGCTGGTTCATCATTAGCAGGAGGTGCTTTAGAACTTTTTGTTGAAATACCG GGGTCACTGTGCGATGTCTATTCAAGACTGGGCATCCGATCATCTCGGGCTTTTGCTTTG GGTTCAACTATAATAACTAAAGGGGAAGAATTCACCATATGTAGAACCGCTCTTGGGAAT TCTTTCAAGAATGGATCTCTTAACAATCCGAGACCTATATATACATGAAGCTGTATTGTG GTTACAAACGCTTTTAAGAAAGAAAAAACACAGTGGCGTGAGGTGAAAATATTAGGATTA TGACCTGCTCGTAGAGCTCTAGTTTTGCAGGGTGATTAAATTCCATAACAAGTTAATTAA ACGATGTTGATTACAGTGTTTTGACGTCCATATAATAGCTAGATGGATGGTAAGGCTACG TATTTAATTTTTACGCGGTTTTTGTTAACCTGTGGGAGAGTTGGAAACTCATAGCTGGGT AATAGCTATAGCCTATAACATGTAATCTACGTGACCTTCATGAAAATAGAGTATAATATT GTTTCGTATGCAACGATAATGGTGCAAGTGAAATTGATATTG