Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g074710.1.1
CDS Infomation	hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (AHRD V3.3 *** AT5G48930.1)
Sequence	ATGAAGGTCAAAATAGAAAGTTCAAAAATCATTAAGCCTTTCTATGAAGACAACATCATC CCTCCTTCTACTAAAACCTATATTCCCCTTAGTGTCTTTGATAAAGTCACTTATGAAGCC CAAATTGCTATTATCTATGCCTATCGCCCTCCCACTCCACCAAACGCCGCGATTCAATTG GGGCTTCAAAAGGCCCTAGCGATTTACAGGGAGTGGGCAGGGCGATTAGGTAAAGACGAA AATGGTATTCCAGTAATTTCGCTCAATGATGAAGGTGTTCGATTCGTTGAGGCATCAGCG GATAGTACCCTTGATAAAGTTATGCCCTTTAAACCTTCCGCTTCTTTGCTTAACTTACAT CCTCGCTTGAACAATGTGGTCGAGTTGGTGCAAGTTCAAGTCACAAGGTTCACTTGTGGC TCGTTGGTGGTCGGGTTCACCGCTCACCACACTGTGGCGGATGGCCATTCCACTAGCAAC TTTTTAGTTGCATGGGGTCAAGCCTGTCGAGGGCTTGACATTAATCCTCTTCCTTTACAT GATCGTACAATTTTTAACCCTCGAAACCCTCCTCTTATCGAGTATGAGCATAAGGGGACC GAGTTTATGTCAAAATCAGTTAAAAAGGAAAATTCACTCGATGAAAGTACTCATCATGTA ACGGAAGATATAGTGGTGCACAAAGTCCATTTCACCGTTGAGTTTCTAGCAAAACTCAAA GTAAAAGCCTCTTCAATGAACAATAACAATAACAGTAACAGTAACAGACCTTATAGCACA TTTGAAAGCCTTGTTGCACATTTATGGAGGGCCATCACTAAAGCGCGAGGCCTAAGTGGC TTCGAGACAACTCATATAAGAATCTCAGTAAATGGTAGAATGAGGTTGAACCCCAGAGTA CCTAATGAGTACTTTGGAAACTTAGTACTGTGGGCATTTCCAACATCAAAAGTGAAGGAT CTTTTAAGAGAGCCTCTTCCTTATGCAACAAAGCTCATTCATGACGCGGTTGTAAAAGTA AACAATAACTATTTTAGATCGTTCATAGACTTTGCTAATCACAAAGATGAGGATCTCATA CCAACAGCAGATATGAACAAACACATATTATGTCCTAATCTCGAAGTTGATAGTTGGTTA AGGTTTCCATTCTACGACTTAGATTTTGGAATGGGGTGTCCGTACATGTTCATGCCTTCA TATTTCCCAACAGAAGGGATGATGTTTCTTCTACCATCATTCATTGGAGATGGAAGCATT GATGCTTTTATTCCATTGTTTCAAGACAACTTGCCCACCTTCAAGAAAATTTGCTATTCT TTAGATCTTGCTTGA

Peptide Sequence

PEP ID	Solyc06g074710.1.1
PEP Infomation	hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (AHRD V3.3 *** AT5G48930.1)
Sequence	MKVKIESSKIIKPFYEDNIIPPSTKTYIPLSVFDKVTYEAQIAIIYAYRPPTPPNAAIQL GLQKALAIYREWAGRLGKDENGIPVISLNDEGVRFVEASADSTLDKVMPFKPSASLLNLH PRLNNVVELVQVQVTRFTCGSLVVGFTAHHTVADGHSTSNFLVAWGQACRGLDINPLPLH DRTIFNPRNPPLIEYEHKGTEFMSKSVKKENSLDESTHHVTEDIVVHKVHFTVEFLAKLK VKASSMNNNNNSNSNRPYSTFESLVAHLWRAITKARGLSGFETTHIRISVNGRMRLNPRV PNEYFGNLVLWAFPTSKVKDLLREPLPYATKLIHDAVVKVNNNYFRSFIDFANHKDEDLI PTADMNKHILCPNLEVDSWLRFPFYDLDFGMGCPYMFMPSYFPTEGMMFLLPSFIGDGSI DAFIPLFQDNLPTFKKICYSLDLA*

Transcript Sequence

Transcript ID	Solyc06g074710.1.1
Transcript Infomation	hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (AHRD V3.3 *** AT5G48930.1)
Sequence	ATGAAGGTCAAAATAGAAAGTTCAAAAATCATTAAGCCTTTCTATGAAGACAACATCATC CCTCCTTCTACTAAAACCTATATTCCCCTTAGTGTCTTTGATAAAGTCACTTATGAAGCC CAAATTGCTATTATCTATGCCTATCGCCCTCCCACTCCACCAAACGCCGCGATTCAATTG GGGCTTCAAAAGGCCCTAGCGATTTACAGGGAGTGGGCAGGGCGATTAGGTAAAGACGAA AATGGTATTCCAGTAATTTCGCTCAATGATGAAGGTGTTCGATTCGTTGAGGCATCAGCG GATAGTACCCTTGATAAAGTTATGCCCTTTAAACCTTCCGCTTCTTTGCTTAACTTACAT CCTCGCTTGAACAATGTGGTCGAGTTGGTGCAAGTTCAAGTCACAAGGTTCACTTGTGGC TCGTTGGTGGTCGGGTTCACCGCTCACCACACTGTGGCGGATGGCCATTCCACTAGCAAC TTTTTAGTTGCATGGGGTCAAGCCTGTCGAGGGCTTGACATTAATCCTCTTCCTTTACAT GATCGTACAATTTTTAACCCTCGAAACCCTCCTCTTATCGAGTATGAGCATAAGGGGACC GAGTTTATGTCAAAATCAGTTAAAAAGGAAAATTCACTCGATGAAAGTACTCATCATGTA ACGGAAGATATAGTGGTGCACAAAGTCCATTTCACCGTTGAGTTTCTAGCAAAACTCAAA GTAAAAGCCTCTTCAATGAACAATAACAATAACAGTAACAGTAACAGACCTTATAGCACA TTTGAAAGCCTTGTTGCACATTTATGGAGGGCCATCACTAAAGCGCGAGGCCTAAGTGGC TTCGAGACAACTCATATAAGAATCTCAGTAAATGGTAGAATGAGGTTGAACCCCAGAGTA CCTAATGAGTACTTTGGAAACTTAGTACTGTGGGCATTTCCAACATCAAAAGTGAAGGAT CTTTTAAGAGAGCCTCTTCCTTATGCAACAAAGCTCATTCATGACGCGGTTGTAAAAGTA AACAATAACTATTTTAGATCGTTCATAGACTTTGCTAATCACAAAGATGAGGATCTCATA CCAACAGCAGATATGAACAAACACATATTATGTCCTAATCTCGAAGTTGATAGTTGGTTA AGGTTTCCATTCTACGACTTAGATTTTGGAATGGGGTGTCCGTACATGTTCATGCCTTCA TATTTCCCAACAGAAGGGATGATGTTTCTTCTACCATCATTCATTGGAGATGGAAGCATT GATGCTTTTATTCCATTGTTTCAAGACAACTTGCCCACCTTCAAGAAAATTTGCTATTCT TTAGATCTTGCTTGA