Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g074640.2.1
CDS Infomation	PHD finger family protein (AHRD V3.3 *** AT5G22760.1)
Sequence	ATGAGGGCTTCCGTGGACAGATCAGTGAGGCGAGGCAGAAAAAGGCGTCAAAACTATGTT CAGAATGATCAGGTGGATCCGAATGGGAAGAAACGGGCAGTAGTGTTGAGGCCTAAGGCA TTTTTGGGAACATATGTTAGGAAGAAGTTTAAGGGCTGTCGGAAATATATGGGGAAGATC ATATCTTATGATACTGGTTTGTATAAGATTGTTTACGAGAATGGAGATCTTGAAGATATG GATAGCAGTGAAGTGAGGGTGGTTTCGTTGGAAGATGATGAGTTGAATGGTCAATGGTTG AAAAGAAAGAAGAAGCTAGACGAAGTAGTTGCCAAGATGGAGGCAACAAGTACTAAGTCT TGTGTTGAGAATCCAGCTGAGCCAATTAATGGCGTAATTGATAAGTTTGAGCCAAAAGAT CGGGGCATAGGTTGTTCAGATAAACTTGAGGTCAACCACCAAGGACGTGATTCTGATTTG GTGAATGATTTGTCTGAATATTATATGGAGCAGGATTTGAGTTCAGGGGTAGAAGTGCCT CTAATTCCTGCACCTCAACTGCCTCCTTCATCTAACAGTATTGGTATTCCAGAGGAGTAT GTATCATGCCTCTTGTCTGTTTATAGTTTTTTACGGTCGTTTAGTATCAGATTGTTTTTA TATCCGTTTGGACTTGAAGATTTTGTGGGAGCACTCAACTGCTCTGCTCCAAACACATTG TTCGATTCTGTTCATGTTGCCCTTATGTGCGCTTTGAGGCGCCAACTCAACAAGCTGTCA TCTGATGATTCTCTGCTTGCATCCAAGTGCCTAAGGGGCATTGATTGGGGCTTGCTTGAT ACAATTACTTGGCCAGTATATCTAGTTCATTATTTAACAGTAATGGGATACATAGAACAA CCTGGCTGGAAAGGTTTTTATCCCCATACTTTGCAGAGGGAATATTACTTGTTATCTGCT GGAAGGAAGATCATGGTTTTGCAGATTTTGTGTGATGATGTTCTAGAATCTGAAGAAATA AGAACAGAAATCAACATGCGTGAAGAATCAAAGTTAGCCATTGAGTCAGATTTACTTACA GATGTTGCTTGTGTCAGTGCACCAAGAATAGTGCATCCCAGGTATGCCAAAACTTCTGCC TGTAAGGGACAAGAAGCAACCGAGCTCTACAAAGAAAATCATGAAAGAAAGCAGGGTTGT AGTACAGATAATTTAGGACCCAAGGTTAGTAACCAAGATTATGTCTCTGGCGGAGTTCAA AATAGTAACAGTGATGAATGCTGTCTCTGCGCCATGGAGGGGACTTTGCTTTGCTGTGAT GGGTGTCCATCGTCTTACCATGCAAGGTGCATTGGAGTTAGCAAGACACATATACCAGAA GGGGAATGGTATTGTCCTGAATGTACAATCAACAAAATTGAACCAAAAATTACGAGGGGA ACAACTCTGAAAGAAGCAGAGCTTTTTGGTGTTGATTCGTATGGACAAATCTTCATGGGT ACTTGCAGTCATTTGCTTGTGTTGAAGACCTTGGCTGGCGCAGACTCTATTTTCAGATAC TACAACGTGAAGGACATTCCCAGAGTCCTGCTAGCACTTAATGCAAATGCACAGCACAGT ACTTTATATCAGGAGATATGCAAAGGAATAATGCAATACTGGAAAATTCCTGGCAATGTC TTTTTCCCTGATGGTGAACTGTCTTTAATTGGTTCAGACAGACCAAATGGAACAAAATTT ACTTGTTTCTCTTCATTGTCACTTAGTTCATTGATCAAGGGAAGTGCTGAACAAGTTGGA GTGGAATATATTGCACCTGGTGGTTGCTTTTACATGGGATCATCCTTTAGGCCTCAACAA TACATAAATAGTTATCTGCATGGAGATTTTGCTGCATCTGCTGCTGCAAATCTAGCTGAA CTTTCTCTCGGAGAAAACCAAGGTAGTGAGAGTCATGCTTCAGACAATAGGCAGAAACAT TCTGCCAATGCTTTACTTCAAGCAAAAGCTTTCTCATCAGCAACAACACGCTTTTTTTGG CCGAGTACTGAAAAGAAGGTTGTGGAAGTACCAAGGGAAAGATGTAGTTGGTGTCTTAAT TGTAAGGCTGCTGTGACTAGTAAGAAAGGATGCTTGTTAAATGCTGCAGCATCAAATGCC ATTAAGGGGGCAGTAAAGATACTTGCTGGTCTTCGTTCTGCAAGTGTTGGGGAGGGAAAT CTACGTGGTATTGCTTCATATATTATATTGATGGAGGAAGGGTTATGTGGTCTGACAGTT GGTCCTTTTCTAAGTACAGCTTTTAGAAAAGAATGGCGTAAACAGGCAGAAGAAGCTACT AGTTGCACTCTGATAAAGTCTCTTCTGCTTCAATTTGAGGAGAATATCCGGTCTGTTGCT TTTTCTGGGGACTGGTTTAAGCTTGTTGATTGTGGGGCATCTGAATCTTCCGTCACTCAT TCAACTGCTGGTGTTGTGGAATCATCTCATAAGCATAAATCAGGGAGGCGGGGTAGAAAA CCATTGCCAATGGTTAAAGTAACTGCTGATGATTGCAAAAATAAACCGAAGGACTTCACT TGGTGGAGAGGAGGCATACTCTCAAAGCTTCTCTTCCAGAAAGCAGCTCTACCTCGATCA ATGTTGAAGAAAGCAGCGCGTCATGGTGGTCTGAGAAATATATCTGGTATTTGTGATGCT GAAGGGTCCAAGACTGCCAAAATAAGCAGGCAGCTTGCTTGGCGAGCTGCCGTTGATGTG TGTAAGACAATATCAAAACTTGCACTTCAGGTCAGGTACCTAGATGTGCATGTGAGATGG AGTGATCTTGTTAGTCCTGAACAGAGCCTCCTGGATGGAAAAGGTCCCGAATCAGAAGCT TCTTCCTTTAGAAATGCTTCCATATGCCATAAACGAATCGTTGAAAATGAGGTTAGATAT AGTGTTGCTTTTGTAAATCAGAAGCATCTCCCATCTCGTGTCAAGAAGAGTATAATAGAA GTAGAGCAAAGTCAGGAGAAGGGAAAGGAAAAATATTGGTTTTCTGAGTCACGGATTCCT TTGTATATAATAAAAGATTATGAAGAAAACTTGGAAAAAGATCTCCGCTCAGCCAACAAG TTTGCCGATGCACTTCCCAAGTTGCAGAGAAGGTGCTTGGTGGCTTCTTGTAAAGATATA TTCTCTTATCTTGCACAGAAGAGAGACGGAAATGCTAAATATTGTTGTGCTTCATGTGAA GTGGTTGTGTCACTTAGGGACGTAGTCAAGTGCAATACATGCCAAGGTCTCTGTCACAAG CAATGTACATTTAGTTCAACAATTATTGGTAATGAGGAGACTGAGTTTTTGACCTGCAAA CAGTGTTATCAGAATAGAGCTTTAACACAAGCTGAAAGTAATCATGAATCTCCTACTAGT CCTTTACTCACGCAAGGAAAAGACATTCCAATTCCTATGTCAGCCAGAAAAGGAGGAAAA GTTGGTAGTTCTAGCAATCCATCTGCATCTACTGCGACTCTAAAGCATTCTTCTAAGGCG AAGCTTGCTAGTTCAAATTTGGCGACACGATGGAAGCACCACTGGGGCATTATTTGGAGA AAGAATAATGAGGATACTGGTGATTTTAGATCTAAACACATTCTTCTGAGGGGAAATCCA GATTGTGATTCAATAAGACCTAGTTGCCGCCTTTGCTGTAAGCCATATGATCCTTATCTA ATGTATGTCCGTTGTGAAACATGCACATGTTGGTACCACGCTGAAGCTGTTGAACTTGAG GAGTCGAAGATTTTTGAAGTGGTGGGGTTCAAATGTTGCAAGTGTCGTAGGATTAAAATG CCCATCTGTCCTTACTTAGATCCAAGAAGCAAAAGACAAGCAGTGGAAAGGAGGATGTGC GCAAGGGCTTTAAAAATGGATAGACAAGGAATTGATTCTGGGTTCATTTCAGAGCTACAG AAAGATGAGAATATGGCCACTCCAGCTTTAGAGGATAGTAAGCCTCTTGTTTCTGCTGTT GAAGAACTTACTGAGCACTTTCAAGTGGGTGATTGTGAACGGAATGTGGAAACAATATCT GTGCAAGGTCAAAGAGAACAGTCAGTCAGAAGTCATATAGAGAATGAGACTGATTTGAAA TCTTCTGAGTTATCCACTCCTCATGGAGGAAACATAGTGTTTCCTAAAGATGAAATGCCA ACTCATGTTGAACCGGGTGCTAAGCAGCTAGTAAGAAGACATGTAAGACTTGAGAAGGAT TCAGATACCCCTTTTGCAAGCGATCCCGTGAATGTTCTGAGGAATACTTCAAGGGAGAGT TCTGAGGAATATGGTCATGAATGCAAGTATATGGAGTTTGAGCCTCAGACTTGTTTCTCT TTCAATGATTTACTTGCATCGGATGATCTTGGCCTATTGGATGATGGAGTTGACTCGTCT GCCACTATAAACAAGGATGTTGAAATATCATCAGGGTTTCTACCCAATAAGAATGCTGAT ACGTCTTATGTCAAGCACGAGCCTGCAGTTAGTACAATACCTACTGCTTCTTTTACAGCT CCATGTAAGTTGTGTTCACGTAAAGAACCAAGCCCTGATCTTTGTTGTGAAACATGTGAA ATATGGATCCACCGTCATTGTTCACCTTGGAATGACGAGGATTCTGGACAAGATGATTGG AAGTGCGGCAACTGTAGGGAATGGAGATGA

Peptide Sequence

PEP ID	Solyc06g074640.2.1
PEP Infomation	PHD finger family protein (AHRD V3.3 *** AT5G22760.1)
Sequence	MRASVDRSVRRGRKRRQNYVQNDQVDPNGKKRAVVLRPKAFLGTYVRKKFKGCRKYMGKI ISYDTGLYKIVYENGDLEDMDSSEVRVVSLEDDELNGQWLKRKKKLDEVVAKMEATSTKS CVENPAEPINGVIDKFEPKDRGIGCSDKLEVNHQGRDSDLVNDLSEYYMEQDLSSGVEVP LIPAPQLPPSSNSIGIPEEYVSCLLSVYSFLRSFSIRLFLYPFGLEDFVGALNCSAPNTL FDSVHVALMCALRRQLNKLSSDDSLLASKCLRGIDWGLLDTITWPVYLVHYLTVMGYIEQ PGWKGFYPHTLQREYYLLSAGRKIMVLQILCDDVLESEEIRTEINMREESKLAIESDLLT DVACVSAPRIVHPRYAKTSACKGQEATELYKENHERKQGCSTDNLGPKVSNQDYVSGGVQ NSNSDECCLCAMEGTLLCCDGCPSSYHARCIGVSKTHIPEGEWYCPECTINKIEPKITRG TTLKEAELFGVDSYGQIFMGTCSHLLVLKTLAGADSIFRYYNVKDIPRVLLALNANAQHS TLYQEICKGIMQYWKIPGNVFFPDGELSLIGSDRPNGTKFTCFSSLSLSSLIKGSAEQVG VEYIAPGGCFYMGSSFRPQQYINSYLHGDFAASAAANLAELSLGENQGSESHASDNRQKH SANALLQAKAFSSATTRFFWPSTEKKVVEVPRERCSWCLNCKAAVTSKKGCLLNAAASNA IKGAVKILAGLRSASVGEGNLRGIASYIILMEEGLCGLTVGPFLSTAFRKEWRKQAEEAT SCTLIKSLLLQFEENIRSVAFSGDWFKLVDCGASESSVTHSTAGVVESSHKHKSGRRGRK PLPMVKVTADDCKNKPKDFTWWRGGILSKLLFQKAALPRSMLKKAARHGGLRNISGICDA EGSKTAKISRQLAWRAAVDVCKTISKLALQVRYLDVHVRWSDLVSPEQSLLDGKGPESEA SSFRNASICHKRIVENEVRYSVAFVNQKHLPSRVKKSIIEVEQSQEKGKEKYWFSESRIP LYIIKDYEENLEKDLRSANKFADALPKLQRRCLVASCKDIFSYLAQKRDGNAKYCCASCE VVVSLRDVVKCNTCQGLCHKQCTFSSTIIGNEETEFLTCKQCYQNRALTQAESNHESPTS PLLTQGKDIPIPMSARKGGKVGSSSNPSASTATLKHSSKAKLASSNLATRWKHHWGIIWR KNNEDTGDFRSKHILLRGNPDCDSIRPSCRLCCKPYDPYLMYVRCETCTCWYHAEAVELE ESKIFEVVGFKCCKCRRIKMPICPYLDPRSKRQAVERRMCARALKMDRQGIDSGFISELQ KDENMATPALEDSKPLVSAVEELTEHFQVGDCERNVETISVQGQREQSVRSHIENETDLK SSELSTPHGGNIVFPKDEMPTHVEPGAKQLVRRHVRLEKDSDTPFASDPVNVLRNTSRES SEEYGHECKYMEFEPQTCFSFNDLLASDDLGLLDDGVDSSATINKDVEISSGFLPNKNAD TSYVKHEPAVSTIPTASFTAPCKLCSRKEPSPDLCCETCEIWIHRHCSPWNDEDSGQDDW KCGNCREWR*

Transcript Sequence

Transcript ID	Solyc06g074640.2.1
Transcript Infomation	PHD finger family protein (AHRD V3.3 *** AT5G22760.1)
Sequence	ATGAGGGCTTCCGTGGACAGATCAGTGAGGCGAGGCAGAAAAAGGCGTCAAAACTATGTT CAGAATGATCAGGTGGATCCGAATGGGAAGAAACGGGCAGTAGTGTTGAGGCCTAAGGCA TTTTTGGGAACATATGTTAGGAAGAAGTTTAAGGGCTGTCGGAAATATATGGGGAAGATC ATATCTTATGATACTGGTTTGTATAAGATTGTTTACGAGAATGGAGATCTTGAAGATATG GATAGCAGTGAAGTGAGGGTGGTTTCGTTGGAAGATGATGAGTTGAATGGTCAATGGTTG AAAAGAAAGAAGAAGCTAGACGAAGTAGTTGCCAAGATGGAGGCAACAAGTACTAAGTCT TGTGTTGAGAATCCAGCTGAGCCAATTAATGGCGTAATTGATAAGTTTGAGCCAAAAGAT CGGGGCATAGGTTGTTCAGATAAACTTGAGGTCAACCACCAAGGACGTGATTCTGATTTG GTGAATGATTTGTCTGAATATTATATGGAGCAGGATTTGAGTTCAGGGGTAGAAGTGCCT CTAATTCCTGCACCTCAACTGCCTCCTTCATCTAACAGTATTGGTATTCCAGAGGAGTAT GTATCATGCCTCTTGTCTGTTTATAGTTTTTTACGGTCGTTTAGTATCAGATTGTTTTTA TATCCGTTTGGACTTGAAGATTTTGTGGGAGCACTCAACTGCTCTGCTCCAAACACATTG TTCGATTCTGTTCATGTTGCCCTTATGTGCGCTTTGAGGCGCCAACTCAACAAGCTGTCA TCTGATGATTCTCTGCTTGCATCCAAGTGCCTAAGGGGCATTGATTGGGGCTTGCTTGAT ACAATTACTTGGCCAGTATATCTAGTTCATTATTTAACAGTAATGGGATACATAGAACAA CCTGGCTGGAAAGGTTTTTATCCCCATACTTTGCAGAGGGAATATTACTTGTTATCTGCT GGAAGGAAGATCATGGTTTTGCAGATTTTGTGTGATGATGTTCTAGAATCTGAAGAAATA AGAACAGAAATCAACATGCGTGAAGAATCAAAGTTAGCCATTGAGTCAGATTTACTTACA GATGTTGCTTGTGTCAGTGCACCAAGAATAGTGCATCCCAGGTATGCCAAAACTTCTGCC TGTAAGGGACAAGAAGCAACCGAGCTCTACAAAGAAAATCATGAAAGAAAGCAGGGTTGT AGTACAGATAATTTAGGACCCAAGGTTAGTAACCAAGATTATGTCTCTGGCGGAGTTCAA AATAGTAACAGTGATGAATGCTGTCTCTGCGCCATGGAGGGGACTTTGCTTTGCTGTGAT GGGTGTCCATCGTCTTACCATGCAAGGTGCATTGGAGTTAGCAAGACACATATACCAGAA GGGGAATGGTATTGTCCTGAATGTACAATCAACAAAATTGAACCAAAAATTACGAGGGGA ACAACTCTGAAAGAAGCAGAGCTTTTTGGTGTTGATTCGTATGGACAAATCTTCATGGGT ACTTGCAGTCATTTGCTTGTGTTGAAGACCTTGGCTGGCGCAGACTCTATTTTCAGATAC TACAACGTGAAGGACATTCCCAGAGTCCTGCTAGCACTTAATGCAAATGCACAGCACAGT ACTTTATATCAGGAGATATGCAAAGGAATAATGCAATACTGGAAAATTCCTGGCAATGTC TTTTTCCCTGATGGTGAACTGTCTTTAATTGGTTCAGACAGACCAAATGGAACAAAATTT ACTTGTTTCTCTTCATTGTCACTTAGTTCATTGATCAAGGGAAGTGCTGAACAAGTTGGA GTGGAATATATTGCACCTGGTGGTTGCTTTTACATGGGATCATCCTTTAGGCCTCAACAA TACATAAATAGTTATCTGCATGGAGATTTTGCTGCATCTGCTGCTGCAAATCTAGCTGAA CTTTCTCTCGGAGAAAACCAAGGTAGTGAGAGTCATGCTTCAGACAATAGGCAGAAACAT TCTGCCAATGCTTTACTTCAAGCAAAAGCTTTCTCATCAGCAACAACACGCTTTTTTTGG CCGAGTACTGAAAAGAAGGTTGTGGAAGTACCAAGGGAAAGATGTAGTTGGTGTCTTAAT TGTAAGGCTGCTGTGACTAGTAAGAAAGGATGCTTGTTAAATGCTGCAGCATCAAATGCC ATTAAGGGGGCAGTAAAGATACTTGCTGGTCTTCGTTCTGCAAGTGTTGGGGAGGGAAAT CTACGTGGTATTGCTTCATATATTATATTGATGGAGGAAGGGTTATGTGGTCTGACAGTT GGTCCTTTTCTAAGTACAGCTTTTAGAAAAGAATGGCGTAAACAGGCAGAAGAAGCTACT AGTTGCACTCTGATAAAGTCTCTTCTGCTTCAATTTGAGGAGAATATCCGGTCTGTTGCT TTTTCTGGGGACTGGTTTAAGCTTGTTGATTGTGGGGCATCTGAATCTTCCGTCACTCAT TCAACTGCTGGTGTTGTGGAATCATCTCATAAGCATAAATCAGGGAGGCGGGGTAGAAAA CCATTGCCAATGGTTAAAGTAACTGCTGATGATTGCAAAAATAAACCGAAGGACTTCACT TGGTGGAGAGGAGGCATACTCTCAAAGCTTCTCTTCCAGAAAGCAGCTCTACCTCGATCA ATGTTGAAGAAAGCAGCGCGTCATGGTGGTCTGAGAAATATATCTGGTATTTGTGATGCT GAAGGGTCCAAGACTGCCAAAATAAGCAGGCAGCTTGCTTGGCGAGCTGCCGTTGATGTG TGTAAGACAATATCAAAACTTGCACTTCAGGTCAGGTACCTAGATGTGCATGTGAGATGG AGTGATCTTGTTAGTCCTGAACAGAGCCTCCTGGATGGAAAAGGTCCCGAATCAGAAGCT TCTTCCTTTAGAAATGCTTCCATATGCCATAAACGAATCGTTGAAAATGAGGTTAGATAT AGTGTTGCTTTTGTAAATCAGAAGCATCTCCCATCTCGTGTCAAGAAGAGTATAATAGAA GTAGAGCAAAGTCAGGAGAAGGGAAAGGAAAAATATTGGTTTTCTGAGTCACGGATTCCT TTGTATATAATAAAAGATTATGAAGAAAACTTGGAAAAAGATCTCCGCTCAGCCAACAAG TTTGCCGATGCACTTCCCAAGTTGCAGAGAAGGTGCTTGGTGGCTTCTTGTAAAGATATA TTCTCTTATCTTGCACAGAAGAGAGACGGAAATGCTAAATATTGTTGTGCTTCATGTGAA GTGGTTGTGTCACTTAGGGACGTAGTCAAGTGCAATACATGCCAAGGTCTCTGTCACAAG CAATGTACATTTAGTTCAACAATTATTGGTAATGAGGAGACTGAGTTTTTGACCTGCAAA CAGTGTTATCAGAATAGAGCTTTAACACAAGCTGAAAGTAATCATGAATCTCCTACTAGT CCTTTACTCACGCAAGGAAAAGACATTCCAATTCCTATGTCAGCCAGAAAAGGAGGAAAA GTTGGTAGTTCTAGCAATCCATCTGCATCTACTGCGACTCTAAAGCATTCTTCTAAGGCG AAGCTTGCTAGTTCAAATTTGGCGACACGATGGAAGCACCACTGGGGCATTATTTGGAGA AAGAATAATGAGGATACTGGTGATTTTAGATCTAAACACATTCTTCTGAGGGGAAATCCA GATTGTGATTCAATAAGACCTAGTTGCCGCCTTTGCTGTAAGCCATATGATCCTTATCTA ATGTATGTCCGTTGTGAAACATGCACATGTTGGTACCACGCTGAAGCTGTTGAACTTGAG GAGTCGAAGATTTTTGAAGTGGTGGGGTTCAAATGTTGCAAGTGTCGTAGGATTAAAATG CCCATCTGTCCTTACTTAGATCCAAGAAGCAAAAGACAAGCAGTGGAAAGGAGGATGTGC GCAAGGGCTTTAAAAATGGATAGACAAGGAATTGATTCTGGGTTCATTTCAGAGCTACAG AAAGATGAGAATATGGCCACTCCAGCTTTAGAGGATAGTAAGCCTCTTGTTTCTGCTGTT GAAGAACTTACTGAGCACTTTCAAGTGGGTGATTGTGAACGGAATGTGGAAACAATATCT GTGCAAGGTCAAAGAGAACAGTCAGTCAGAAGTCATATAGAGAATGAGACTGATTTGAAA TCTTCTGAGTTATCCACTCCTCATGGAGGAAACATAGTGTTTCCTAAAGATGAAATGCCA ACTCATGTTGAACCGGGTGCTAAGCAGCTAGTAAGAAGACATGTAAGACTTGAGAAGGAT TCAGATACCCCTTTTGCAAGCGATCCCGTGAATGTTCTGAGGAATACTTCAAGGGAGAGT TCTGAGGAATATGGTCATGAATGCAAGTATATGGAGTTTGAGCCTCAGACTTGTTTCTCT TTCAATGATTTACTTGCATCGGATGATCTTGGCCTATTGGATGATGGAGTTGACTCGTCT GCCACTATAAACAAGGATGTTGAAATATCATCAGGGTTTCTACCCAATAAGAATGCTGAT ACGTCTTATGTCAAGCACGAGCCTGCAGTTAGTACAATACCTACTGCTTCTTTTACAGCT CCATGTAAGTTGTGTTCACGTAAAGAACCAAGCCCTGATCTTTGTTGTGAAACATGTGAA ATATGGATCCACCGTCATTGTTCACCTTGGAATGACGAGGATTCTGGACAAGATGATTGG AAGTGCGGCAACTGTAGGGAATGGAGATGA