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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g074080.3.1
CDS Infomation

Histone deacetylase, putative (AHRD V3.3 *** B9SD06_RICCO)
Sequence

ATGGCTTCTTCAGCATCACAATCTTTACCATCAAAAAACAACCTTATTCATGTATTCTGG
GACGAGGGTATGCTGAAACATGACACAGGAAGAGGTGTTTTCGACACAGGAATGGACCCT
GGTTTTCTTGATGTTTTAGAAAAACACCCAGAAAATTCAGACAGGGTTAAAAACATGTTG
TCTATTCTCAAAAGGGGTCCTATTTCACCTTTCATTTCTTGGCACCATGGACGCCCTGCT
CACGTCTCTGAATTATTATCTTTTCACACCCAAGAATATGTAAATGAACTAATTGAAGCT
GATAGAAATGGCGGAAAAGAATTATGTGGAGGGACATTCTTAAATCCTGGGTCATGGCAC
GCTACACTTCTTGCTGCTGGTACTACATTATCGGCTATGAAGCTTATAATTGATGGACAT
GGGAATGTCGCGTATGCGTTGGTCAGGCCACCTGGTCATCATGCACAACCTACTCAAGCT
GATGGGTATTGCTTCCTTAACAATGCGGGTCTAGCTGTACAACTGGCTTTAGATGGTGGC
TGTAGGAAGGTTGTTGTCCTTGACATCGATGTTCATTACGGGAATGGAACAGCAGAAGGA
TTTTATCATTTTGATAAGGTTCTTACTATCTCCCTTCATATGAATCATGGTTCTTGGGGC
CCCTCTCATTCACAGGGTGGAACTATAGAGGAGCTCGGCGAAGGTGAAGGTTTTGGGTAT
AACCTGAATATACCATTACCAAATGGAACCGGGGACAAAGGGTATGGCTACGCCATGCAA
CATTTAGTTGTTCCTGCTATCGAGAAATTTGAGCCTGATATGATGGTTTTGGTTGTTGGG
CAGGACTCAAGTGCTTTTGATCCAAATGGAAGACAATGCTTGACAATGGAAGGTTACAGA
GAGATTGGGCAGACAATTCGTGGCATGGCAAACAAGTATAGCAATGGACGACTCTTGATA
GTCCAAGAAGGCGGATACCATGTTACATATTCAGCCTATTGTCTGCACGCGACTCTTGAA
GGTGTGCTCAATGTTTCAGACCCTCTATTATCTGATCCTATCGCTTATTATCCTGAAGAT
GAATCATTTCCAGCCAAGGTAATCGATGCTATCAAAAAATATCAAAGAGAAGTTGTACCT
TTTCTTAGAGATGCTTAG

Peptide Sequence

PEP ID

Solyc06g074080.3.1
PEP Infomation

Histone deacetylase, putative (AHRD V3.3 *** B9SD06_RICCO)
Sequence

MASSASQSLPSKNNLIHVFWDEGMLKHDTGRGVFDTGMDPGFLDVLEKHPENSDRVKNML
SILKRGPISPFISWHHGRPAHVSELLSFHTQEYVNELIEADRNGGKELCGGTFLNPGSWH
ATLLAAGTTLSAMKLIIDGHGNVAYALVRPPGHHAQPTQADGYCFLNNAGLAVQLALDGG
CRKVVVLDIDVHYGNGTAEGFYHFDKVLTISLHMNHGSWGPSHSQGGTIEELGEGEGFGY
NLNIPLPNGTGDKGYGYAMQHLVVPAIEKFEPDMMVLVVGQDSSAFDPNGRQCLTMEGYR
EIGQTIRGMANKYSNGRLLIVQEGGYHVTYSAYCLHATLEGVLNVSDPLLSDPIAYYPED
ESFPAKVIDAIKKYQREVVPFLRDA*

Transcript Sequence

Transcript ID

Solyc06g074080.3.1
Transcript Infomation

Histone deacetylase, putative (AHRD V3.3 *** B9SD06_RICCO)
Sequence

TTAAGTAAAAAAAAAATAAACTATGATTTTTGTTATTTTCAATCCACAGGGGAGGATGAA
TTATTTAGAGTAAAAAAGAGTCAGAAGCATCAAAACAAAGTGGCCACTATAGGGTATTGG
AAGCTTCAAATTTGTCCATGGCTTCTTCAGCATCACAATCTTTACCATCAAAAAACAACC
TTATTCATGTATTCTGGGACGAGGGTATGCTGAAACATGACACAGGAAGAGGTGTTTTCG
ACACAGGAATGGACCCTGGTTTTCTTGATGTTTTAGAAAAACACCCAGAAAATTCAGACA
GGGTTAAAAACATGTTGTCTATTCTCAAAAGGGGTCCTATTTCACCTTTCATTTCTTGGC
ACCATGGACGCCCTGCTCACGTCTCTGAATTATTATCTTTTCACACCCAAGAATATGTAA
ATGAACTAATTGAAGCTGATAGAAATGGCGGAAAAGAATTATGTGGAGGGACATTCTTAA
ATCCTGGGTCATGGCACGCTACACTTCTTGCTGCTGGTACTACATTATCGGCTATGAAGC
TTATAATTGATGGACATGGGAATGTCGCGTATGCGTTGGTCAGGCCACCTGGTCATCATG
CACAACCTACTCAAGCTGATGGGTATTGCTTCCTTAACAATGCGGGTCTAGCTGTACAAC
TGGCTTTAGATGGTGGCTGTAGGAAGGTTGTTGTCCTTGACATCGATGTTCATTACGGGA
ATGGAACAGCAGAAGGATTTTATCATTTTGATAAGGTTCTTACTATCTCCCTTCATATGA
ATCATGGTTCTTGGGGCCCCTCTCATTCACAGGGTGGAACTATAGAGGAGCTCGGCGAAG
GTGAAGGTTTTGGGTATAACCTGAATATACCATTACCAAATGGAACCGGGGACAAAGGGT
ATGGCTACGCCATGCAACATTTAGTTGTTCCTGCTATCGAGAAATTTGAGCCTGATATGA
TGGTTTTGGTTGTTGGGCAGGACTCAAGTGCTTTTGATCCAAATGGAAGACAATGCTTGA
CAATGGAAGGTTACAGAGAGATTGGGCAGACAATTCGTGGCATGGCAAACAAGTATAGCA
ATGGACGACTCTTGATAGTCCAAGAAGGCGGATACCATGTTACATATTCAGCCTATTGTC
TGCACGCGACTCTTGAAGGTGTGCTCAATGTTTCAGACCCTCTATTATCTGATCCTATCG
CTTATTATCCTGAAGATGAATCATTTCCAGCCAAGGTAATCGATGCTATCAAAAAATATC
AAAGAGAAGTTGTACCTTTTCTTAGAGATGCTTAGTTGGTATCTCATTTCGTGTTTGCTT
ATGAGCTCAAACACTGGGCT