Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g073840.3.1
CDS Infomation

Peptidyl-prolyl cis-trans isomerase, FKBP-type (AHRD V3.3 *** A0A103YFM3_CYNCS)
Sequence

ATGTTTAACGGAATGATGGATCCTGAATTGATCAGAATGGCGCAAGAGCAGATGAGTCGC
ATGTCCCCGGCTGATTTGGCTCGGATGCAGCAGCAGATGATGTCTAATCCTGATTTAATG
AGAATGGCTACTGAAGGCATGAAAAACATGAGGCCGGATGACTTAAAGGTTGCTGCAGAA
CAGTTGAAGCATACTCGTCCTGAGGATATGGCTGAGATTGGTAAAAAAATGGCTAATGCT
TCACCTGAAGAAATAGCAGCAATGAGTGCCCAAATGGATGCTCAGGTTAAATATGAAATT
AGCGGAGCTGAGTTCCTGAAGAAGCAGGGAAATGATCTTCACAGCCAGGGAAAGTTTAAG
GAGGCCCTGCAGAAATATTCGCTTGCAAAGAAAAATCTGTCAAGCATTCCTGCCGCGAAA
GGCAGGAGTATCTCATTGGCTTGTTCCTTGAACATGATGTCATGTTACTTAAAAACTGGA
CAATACGATGACTGCATAAAGGAAGGTAGTGAGGTTTTGACATATGACGACAAGAATATC
AAAGCTCTTTATCGTAGGGGTCAAGCTTATAAAGAGCTGGGACAGTTAGAAGATGCAGTG
TCTGATTTGAGTAAAGCACTTGAAGTCTCGCCTGATGATGACACTATTGCTGATGTCTTA
AGGGGTGTCCAAGAAAGATTGGTGAAAGAAGGTGGTTCTTCAAGACGTAGAGGAGGATTG
GTTATTGAAGAAATAATTGAAGAAGAACCATTAGTGTCTTCAGAAGCCGTGGATAATTCA
TTTCCAAAAAGTGTTGCGTCACAACCACGTGAATCGATCAGCCCTCCTAAGAGTCAAAAT
GAAATTCTTGGTGGGCCTCCCTTATCAAGTTCAGAGTCTTTGGAGGCTTTAAAAAATGAC
CCCGAATCCATGAGATCCTTCCAGAATTTTATTTCTCGCGCTGATCCAGACACACTATCT
GCCTTAAGTGGTGGAAATGCCAAAGGCATACCTCCTGAAATGGTAAAGACAGCCTCCAAT
GTTATTGGCAAGATGTCACCAGAAGAACTACAAAGAATGGTCCGGTTGGCATCCTCCTTT
CAAGGAGAAAATCCCTTTCTTAAAAAAGGTTCCTCAGATAGCTTTGGCCCTGGCTCAGTT
CCTCCAAATGTGACACCCGACATGCTGAAAATGGCAACTGATATGATGGGCAAAATGTCT
CCAGAAGACATGCAAAAGATGTTTACAATGGCATCTTCATTAAAAGAGAAAAGTCCAGTA
TCGGCTGCAACAACTATTGATTCTAATGGGTCAGGTCAGCAGTCAAAACCTCGTGACACT
AGGGAAAATTTTAAAGTGGATGACAGTACAAGTGCAAGCACTTCATCACAGGGGTTTTCT
GATTTAAATAATGGTTCTTACTCAAGCTTATCAAGTTCAAATGTTGATCTGCAAGAAGAA
ATGAGAAACCGAATGAAAGATCCAGCCATGAGACAGATGTTCTCTTCAATGATTAAAAAT
ATGAGTCCAGAGATGATGTCTAACATGAGTGAACAATTTGGGGTGAAGCTCAGTCAGGCA
GATGCAGAGAAAGCTCAACAGGCAATGTCATCTTTGTCACCAGATGACTTGGAAAAGATG
ATGAAGTGGGCTGATAGAATTCAAAGAGGAGTTGAAGGTGCGAAGAAGACAAAAAATTGG
CTCTTAGGAAAACCTGGCATGATCTTGGCTATACTTGTGCTACTTTTAGCAGTCATCCTT
CACAAGCTGGGCTTCATCGGGAGCTAA

Peptide Sequence

PEP ID

Solyc06g073840.3.1
PEP Infomation

Peptidyl-prolyl cis-trans isomerase, FKBP-type (AHRD V3.3 *** A0A103YFM3_CYNCS)
Sequence

MFNGMMDPELIRMAQEQMSRMSPADLARMQQQMMSNPDLMRMATEGMKNMRPDDLKVAAE
QLKHTRPEDMAEIGKKMANASPEEIAAMSAQMDAQVKYEISGAEFLKKQGNDLHSQGKFK
EALQKYSLAKKNLSSIPAAKGRSISLACSLNMMSCYLKTGQYDDCIKEGSEVLTYDDKNI
KALYRRGQAYKELGQLEDAVSDLSKALEVSPDDDTIADVLRGVQERLVKEGGSSRRRGGL
VIEEIIEEEPLVSSEAVDNSFPKSVASQPRESISPPKSQNEILGGPPLSSSESLEALKND
PESMRSFQNFISRADPDTLSALSGGNAKGIPPEMVKTASNVIGKMSPEELQRMVRLASSF
QGENPFLKKGSSDSFGPGSVPPNVTPDMLKMATDMMGKMSPEDMQKMFTMASSLKEKSPV
SAATTIDSNGSGQQSKPRDTRENFKVDDSTSASTSSQGFSDLNNGSYSSLSSSNVDLQEE
MRNRMKDPAMRQMFSSMIKNMSPEMMSNMSEQFGVKLSQADAEKAQQAMSSLSPDDLEKM
MKWADRIQRGVEGAKKTKNWLLGKPGMILAILVLLLAVILHKLGFIGS*

Transcript Sequence

Transcript ID

Solyc06g073840.3.1
Transcript Infomation

Peptidyl-prolyl cis-trans isomerase, FKBP-type (AHRD V3.3 *** A0A103YFM3_CYNCS)
Sequence

TTGTCACAAATAAAAGTTCGAGGGCTTCCACTTTACTTCTCCGCTAGGGAAAATATTACT
TGGAAGATCCTTGTCGTTTCGAATTGCGATTTCTCTACTGGTAGGCGTCCAAAATCCAAC
TAATTACGACCATTCTTGTTCATCGCTCTCGTTTTTTTTCGGTTCAACAGATCGCTATCA
AACGTAATCGCACATATACATATTTCTGATTGAAAATTTTGTTCAATTTGATTCGAAAAT
CGACGGATTTTACCTACAGATTCATCCGATTTCGCCTGATTTTGAATTGAGGATTCAAGG
GAAGATCAGATTATTCGACTGTGTATTAGGCAGAATGTTTAACGGAATGATGGATCCTGA
ATTGATCAGAATGGCGCAAGAGCAGATGAGTCGCATGTCCCCGGCTGATTTGGCTCGGAT
GCAGCAGCAGATGATGTCTAATCCTGATTTAATGAGAATGGCTACTGAAGGCATGAAAAA
CATGAGGCCGGATGACTTAAAGGTTGCTGCAGAACAGTTGAAGCATACTCGTCCTGAGGA
TATGGCTGAGATTGGTAAAAAAATGGCTAATGCTTCACCTGAAGAAATAGCAGCAATGAG
TGCCCAAATGGATGCTCAGGTTAAATATGAAATTAGCGGAGCTGAGTTCCTGAAGAAGCA
GGGAAATGATCTTCACAGCCAGGGAAAGTTTAAGGAGGCCCTGCAGAAATATTCGCTTGC
AAAGAAAAATCTGTCAAGCATTCCTGCCGCGAAAGGCAGGAGTATCTCATTGGCTTGTTC
CTTGAACATGATGTCATGTTACTTAAAAACTGGACAATACGATGACTGCATAAAGGAAGG
TAGTGAGGTTTTGACATATGACGACAAGAATATCAAAGCTCTTTATCGTAGGGGTCAAGC
TTATAAAGAGCTGGGACAGTTAGAAGATGCAGTGTCTGATTTGAGTAAAGCACTTGAAGT
CTCGCCTGATGATGACACTATTGCTGATGTCTTAAGGGGTGTCCAAGAAAGATTGGTGAA
AGAAGGTGGTTCTTCAAGACGTAGAGGAGGATTGGTTATTGAAGAAATAATTGAAGAAGA
ACCATTAGTGTCTTCAGAAGCCGTGGATAATTCATTTCCAAAAAGTGTTGCGTCACAACC
ACGTGAATCGATCAGCCCTCCTAAGAGTCAAAATGAAATTCTTGGTGGGCCTCCCTTATC
AAGTTCAGAGTCTTTGGAGGCTTTAAAAAATGACCCCGAATCCATGAGATCCTTCCAGAA
TTTTATTTCTCGCGCTGATCCAGACACACTATCTGCCTTAAGTGGTGGAAATGCCAAAGG
CATACCTCCTGAAATGGTAAAGACAGCCTCCAATGTTATTGGCAAGATGTCACCAGAAGA
ACTACAAAGAATGGTCCGGTTGGCATCCTCCTTTCAAGGAGAAAATCCCTTTCTTAAAAA
AGGTTCCTCAGATAGCTTTGGCCCTGGCTCAGTTCCTCCAAATGTGACACCCGACATGCT
GAAAATGGCAACTGATATGATGGGCAAAATGTCTCCAGAAGACATGCAAAAGATGTTTAC
AATGGCATCTTCATTAAAAGAGAAAAGTCCAGTATCGGCTGCAACAACTATTGATTCTAA
TGGGTCAGGTCAGCAGTCAAAACCTCGTGACACTAGGGAAAATTTTAAAGTGGATGACAG
TACAAGTGCAAGCACTTCATCACAGGGGTTTTCTGATTTAAATAATGGTTCTTACTCAAG
CTTATCAAGTTCAAATGTTGATCTGCAAGAAGAAATGAGAAACCGAATGAAAGATCCAGC
CATGAGACAGATGTTCTCTTCAATGATTAAAAATATGAGTCCAGAGATGATGTCTAACAT
GAGTGAACAATTTGGGGTGAAGCTCAGTCAGGCAGATGCAGAGAAAGCTCAACAGGCAAT
GTCATCTTTGTCACCAGATGACTTGGAAAAGATGATGAAGTGGGCTGATAGAATTCAAAG
AGGAGTTGAAGGTGCGAAGAAGACAAAAAATTGGCTCTTAGGAAAACCTGGCATGATCTT
GGCTATACTTGTGCTACTTTTAGCAGTCATCCTTCACAAGCTGGGCTTCATCGGGAGCTA
AACTTGACGTTCTAGCCAAATATTAGCATGAAGAGTTGAGTAGAGTTTGGAATCCTTGTA
CTAATGTACTTGAAATGGGGATATCAGTGGGTAAACCTTGGTTGGAGATGACATTAGTTA
CTTTTGTTATATTACGCTTTTTTTTTCTTTCTTTATTTGGGTGTTTGTAGATGTAACTTA
AACTTGACAAATTATTTAGTTCGCTGTTTTGCGGTAGAACTCGCCGTTTCTAGATGAAGT
TTTGGTAAGACTACCCTTTACAAATTAAGAAATCATGAACTTACTGGCTCAGATATAATT
CGTATTATAAAAAAATTACTATAGTGGTTTTTTGTCTGTGATTCTGATTGGTCCTGTCTG
GTGAAATGTAACTTTAACAAATATAGTATATGCACATTTGTAAATGTTCGAGCGTTATAA
AAGAGTATACAACGACAATTTACATGTTGAAATAAACATATGATCGAATCTTGATATGAA
AGCAACTCATGTAATGTTTAAAAAAAAAGGAAGAACTAAACGTGGTGATGAGAATGACAA
AGGAAATACAGCTGCTAATTCTCATAAAGTCGGAGCGAAGAGGACTAATATAAATAGTGT
AATTTTACAAATTACAATTTAAAAGAGTGTAATTTCACAAAAAATATATTGTAGGTAGAT
CTCATCTCTTAAAAAATAGTATTTTTAATAAATACTCTCGGTTTGAAACTGTCACATTCA
TCTTATTTGGAAAATACAGCAACAAGCAAATAAAGAAATAAAATATGTACAATTTACAAA
TGTAACATTGTGAAGTTCACGTGGACCCAAGTCTCATTACTTCTCTAAGGGATTTTTTTT
ATATTAAGAAAGAAAAAATCAACGGTGTGTCCACCTAAAAACCGTGTTCAATGAATTATT
ACTCCACCCAACGTTTTTTGGGCAAAATACACAATGTACAAATCCATTAATCTTCAATTT
CTGTCTCTTTCACCTTTTTTTTCTTCTTAATTATAATTATAATTGCATTTTAAGTCCTTA
CTTATTTTGATTATGCCATGCTAAGTCCTCCTCTCTCTGTGATAGAGTCCTCCAAAATCC
AGCTCCATAGAACCGGTCCCACATTTCCGTTTCAAAATCGGCGGCTTCCCGTACTCCGTC
GTCGTTTTCACCGTCAAATTTCTCCCGATCGCCGTCGTCTTCATCGTAGGCACCTAGGTA
AACATTCTTATTATTCTTCATCGACTTCCATGAATCCTCCTCTTTCTTCTTCTTCCTCAA
AAGCCTCTCCCGTTTCTTCTTCCTCCATATTTTCCGGCATAATCCCGTCGGGACTTTGTA
CAACGCTAGTACCAATAAATGCATCACCGTACATGGACAACAACAGCATACCATCGCACA
CTCCGCCGCTGTGCCCCCAGCTACCTCCCCTATCCGTTTATGTGTGCTGCAATTCCGTTT
CTCCTCTTCCTCCTCCTTCATTGTCTCCGATTTCACGAAATTACTCGTCGGAGGTTCAAC
AATTTACACTCCGTTATCGTAA