Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g073550.3.1
CDS Infomation	La-related protein (AHRD V3.3 *** A0A0B2S1Z3_GLYSO)
Sequence	ATGGCGGAAAATGAGAGTACTGGAGATGATCAGAAGGAGGTGATTGAGCCTCCAAAGTCG CCGTGGAAGACTCCGGCGCCGGCGCCGGTGCCGGCGGATAAGGGTTCTGCGTCGTCAGGG GATGATGATTCTGATTCCTGGCCGGCACTTGCTGATGCTCAGCAGATGATTAAGTCTGGT GATTCTAGTTCCGCCGCTAAGTTGCCGTCACTTCCGCCGCAGCAGGAGATTGGCAGCCGC AATGTTGCTTCTGACAAGGTCCGAGGTGAGCAGCTAAAGTTCCATGGGTCTTCTAGTGCC AAATCTTCAAATAAGTCATCATCCGCAGTTCAACAAAGACCAGTGCATAGGCACAACCAA AATGGTGTGCCATCATTTCCTGTGCCCTTGGCTTACCACCAATCAGGATTCCCTCCTTTT TATCAAAGTATGGTACCTATGCCACATATTCCTCTTCCAGGGTATGCATACCAGCCCCCT CGAGGGTCTTTCTCAGGAGCTGAAGGTCACGTGGCTAGGTCTGATGGTGATGCTGCATCT CAAGCTTTTGTACCCCCTATAAATGGTGGGTTTCGCCCCCCATCACGAGGGGATCCAAAT GACCATGATGCCAAATTCTACAGAGGAAGACCTAATACACAAGAGCGAGGTAGCCAGTTT AGTTCAAGCTTGTCTAATCAGCGATCTGTGGGTTCTAAAGATGACATTCAGCTGCAACAA AGTATGGGGCTAAGGCCTTTCCTAAGGCCTCCATATTTTGGTCCAGCCCCGGGCTACATG GATGGTGCAAATTTTCCTGGTCATCCAGGAGCTATATATTTTCTTCCTTCTCCCACTCCT GTGAGAGTTCCTTACCCACCTTTCTTTGTCCCACATTCTGTTAGCTCTGGAGCCTCTACT CCACCATCACCTGCATTAGCTTTGAGAGAGAGCATATTGAAGCAAATTGAATACTATTTC AGTGATCAGAATTTGCAGAATGATCGCTTCTTGCTTACCTTAATGGACGATCAAGGTTGG GTTCCAATCTCTAGTATCGCTGAGTTCAAAAGGGTTAAAAAAATGAGTACAGATATAGCA TTTATCATTGATGCATTGCAGGCTTCAAGCACTGTTGAAGTAAAGGGAGACAAGTTGAGA AGACGTGATGAATGGTCAAAGTGGGTTTCAGCTAGTGCTGATCAGAAATCATCCCCTTTG ACCCCGGTGGAACACTCAGTGGGGAAGGTTATAAAGAAGGATGAGGTCAATGAAAATAAA GAGGATGGATTTCAAGTCAGATTTTCCCAAGAAAATCGTGTAGGTGAGCTTGCATCATTA GAGAAACATGCTAAAAAAGTGTCAGTGTTTAGTAAAGCAGAAACCAGTAGGAAGAAATCT GGATTCCGTGGTCCAACTCACAGAGTTGACAAAGGAAGTGGTGATGCAAGAATGGTTATG GCATCAAATGTTGTAGAAGAGAATGTAGACGACTTATCTAATGATTTCTCGAGCACATTT ATGCTTGATGAAGAGATGGAGCTTGAAAATAAAAAGGACCAGTCCTCTTTGAGTGGAAGA GTTGAGGAAGAAGATGACGAGATGTACGTTAATGACGAGGCTATTGAGAAACTTGTCATT GTAACTCGGAACACTCGGGCATCTCAGGTATCTGGAACTGTTGGAAAAGAATCAAAACCA ATATCTACTGAGCTTGCTTCTGCAATAAATGATGGTCTCTACTTCTATGAGCAGGAGCTT AAAGCTACACGATCCAGTCATAGATCTAACAACTCCAATAATGATCCTAGAGATGACATT AGTAGGTCTTTTGGTACTGGTGCTGCTTTATCCAAATCAAAGTATGCCGATCATTCTTCT GGAGGAAAAAACACTGAAGGTCCTGGAAGTTCCAACTCCCGGAGAAAGCAAAACAAAGGA TTTGCTAAGCCACATCCAATACATAAGCAGCGGCTGTTTTCTGGAAATTACCGGAATCAT GGGGTTTCTCGGAACAGTGTAGGAGCAATATCTGAAAGTCCACCTAGCGATTCAGTTGGG TTTTTCTTTGGTTCTACACCTCCTGACAGTCATGTGTCTAGGCCTTCAAAGTTGAGTGCC TCTCCGCACAGCAATCTTGCTAGTAATAGTCCGCCAGTTGGTTCCATGCCTAAACCATTT CCACCCTTCCAGCATCCAAGTCACAAGCTGCTACAAGAAAATGGTTTTACACAGCAGCTG TACAAGAAGTATCATAAGCGCTGTCTGACTGATCGCAAGAAACTTGGAATTGGTTGCAGT GAGGAAATGAATACACTGTACAGGTTTTGGTCGTATTTTCTGCGGAACATGTTCATACGT TCTATGTACAATGAGTTCCAAAAGATGGCTCAAGAAGATGCAGCTGCTAATTATAACTAT GGGATGGAGTGCCTATTTAGATTTTATAGTTACGGTTTGGAAAAGGAATTTAGAGAGGAC CTTTATGACGACTTTGAGAGATTGACGCTTGACACCTACAATAGGGGAAACCTTTACGGC CTTGAGAAGTACTGGGCCTTTCACCATTTCCGTCAGCAACGAGGTCAGAGAGCACCTTTG AAGAAGCTTCCAGAACTGGATAGACTACTCAGAGAAGAGTTCCGAAATTTGGATGACTTT AAACATGCCAGAGGAGGTGCCAGTGCAAGCACAAAGGAGGACGGTCACTAA

Peptide Sequence

PEP ID	Solyc06g073550.3.1
PEP Infomation	La-related protein (AHRD V3.3 *** A0A0B2S1Z3_GLYSO)
Sequence	MAENESTGDDQKEVIEPPKSPWKTPAPAPVPADKGSASSGDDDSDSWPALADAQQMIKSG DSSSAAKLPSLPPQQEIGSRNVASDKVRGEQLKFHGSSSAKSSNKSSSAVQQRPVHRHNQ NGVPSFPVPLAYHQSGFPPFYQSMVPMPHIPLPGYAYQPPRGSFSGAEGHVARSDGDAAS QAFVPPINGGFRPPSRGDPNDHDAKFYRGRPNTQERGSQFSSSLSNQRSVGSKDDIQLQQ SMGLRPFLRPPYFGPAPGYMDGANFPGHPGAIYFLPSPTPVRVPYPPFFVPHSVSSGAST PPSPALALRESILKQIEYYFSDQNLQNDRFLLTLMDDQGWVPISSIAEFKRVKKMSTDIA FIIDALQASSTVEVKGDKLRRRDEWSKWVSASADQKSSPLTPVEHSVGKVIKKDEVNENK EDGFQVRFSQENRVGELASLEKHAKKVSVFSKAETSRKKSGFRGPTHRVDKGSGDARMVM ASNVVEENVDDLSNDFSSTFMLDEEMELENKKDQSSLSGRVEEEDDEMYVNDEAIEKLVI VTRNTRASQVSGTVGKESKPISTELASAINDGLYFYEQELKATRSSHRSNNSNNDPRDDI SRSFGTGAALSKSKYADHSSGGKNTEGPGSSNSRRKQNKGFAKPHPIHKQRLFSGNYRNH GVSRNSVGAISESPPSDSVGFFFGSTPPDSHVSRPSKLSASPHSNLASNSPPVGSMPKPF PPFQHPSHKLLQENGFTQQLYKKYHKRCLTDRKKLGIGCSEEMNTLYRFWSYFLRNMFIR SMYNEFQKMAQEDAAANYNYGMECLFRFYSYGLEKEFREDLYDDFERLTLDTYNRGNLYG LEKYWAFHHFRQQRGQRAPLKKLPELDRLLREEFRNLDDFKHARGGASASTKEDGH*

Transcript Sequence

Transcript ID	Solyc06g073550.3.1
Transcript Infomation	La-related protein (AHRD V3.3 *** A0A0B2S1Z3_GLYSO)
Sequence	AAATATTTACTACTCAATTTATTCATTTTTCACTTCTCTATTATATTTAAATTTAAACTA AAATTCACTTTTACTAGTATTTAATTTGAAAAAATGAAAATAAAAGTTTACCTCTCATTT ATCCTTGTTATTAACTAAAATTATTTTTCTATGTAATTTAAAAGAATGAAATTGATTATA CTTATCGTAAAACTTTAATCTTATTTTTTGTCCTTCAGAGAGTCGTTTCGTTGGAGAATA AGTTATGTTTGGATAAATACGATAACGATAATATTTCAATTCCAAGACAAGTTATCCCAA TTATTATTAATAAGGATATGGGAGTAAATAGGGAACGAATAAAAATAGACGGACTTAAAC GAATTTCGCGTTAGAAGTATAAATATAGTGCATAGAGTGAATCCGTCACTGTTTGACAAC ATTCAATATTTTGTCTCTTTGTCTGAAACACTCATCAACCCTAGTAGTATCTCTCTCTCA GCCACCACACACCACTGTAAACCTCCGCCGTTTTCGCCTTTTCTTCATCGGAGTATCACT AATTTGAATTTATATATTTATATATAGAAGTTGCTGACTATGGCGGAAAATGAGAGTACT GGAGATGATCAGAAGGAGGTGATTGAGCCTCCAAAGTCGCCGTGGAAGACTCCGGCGCCG GCGCCGGTGCCGGCGGATAAGGGTTCTGCGTCGTCAGGGGATGATGATTCTGATTCCTGG CCGGCACTTGCTGATGCTCAGCAGATGATTAAGTCTGGTGATTCTAGTTCCGCCGCTAAG TTGCCGTCACTTCCGCCGCAGCAGGAGATTGGCAGCCGCAATGTTGCTTCTGACAAGGTC CGAGGTGAGCAGCTAAAGTTCCATGGGTCTTCTAGTGCCAAATCTTCAAATAAGTCATCA TCCGCAGTTCAACAAAGACCAGTGCATAGGCACAACCAAAATGGTGTGCCATCATTTCCT GTGCCCTTGGCTTACCACCAATCAGGATTCCCTCCTTTTTATCAAAGTATGGTACCTATG CCACATATTCCTCTTCCAGGGTATGCATACCAGCCCCCTCGAGGGTCTTTCTCAGGAGCT GAAGGTCACGTGGCTAGGTCTGATGGTGATGCTGCATCTCAAGCTTTTGTACCCCCTATA AATGGTGGGTTTCGCCCCCCATCACGAGGGGATCCAAATGACCATGATGCCAAATTCTAC AGAGGAAGACCTAATACACAAGAGCGAGGTAGCCAGTTTAGTTCAAGCTTGTCTAATCAG CGATCTGTGGGTTCTAAAGATGACATTCAGCTGCAACAAAGTATGGGGCTAAGGCCTTTC CTAAGGCCTCCATATTTTGGTCCAGCCCCGGGCTACATGGATGGTGCAAATTTTCCTGGT CATCCAGGAGCTATATATTTTCTTCCTTCTCCCACTCCTGTGAGAGTTCCTTACCCACCT TTCTTTGTCCCACATTCTGTTAGCTCTGGAGCCTCTACTCCACCATCACCTGCATTAGCT TTGAGAGAGAGCATATTGAAGCAAATTGAATACTATTTCAGTGATCAGAATTTGCAGAAT GATCGCTTCTTGCTTACCTTAATGGACGATCAAGGTTGGGTTCCAATCTCTAGTATCGCT GAGTTCAAAAGGGTTAAAAAAATGAGTACAGATATAGCATTTATCATTGATGCATTGCAG GCTTCAAGCACTGTTGAAGTAAAGGGAGACAAGTTGAGAAGACGTGATGAATGGTCAAAG TGGGTTTCAGCTAGTGCTGATCAGAAATCATCCCCTTTGACCCCGGTGGAACACTCAGTG GGGAAGGTTATAAAGAAGGATGAGGTCAATGAAAATAAAGAGGATGGATTTCAAGTCAGA TTTTCCCAAGAAAATCGTGTAGGTGAGCTTGCATCATTAGAGAAACATGCTAAAAAAGTG TCAGTGTTTAGTAAAGCAGAAACCAGTAGGAAGAAATCTGGATTCCGTGGTCCAACTCAC AGAGTTGACAAAGGAAGTGGTGATGCAAGAATGGTTATGGCATCAAATGTTGTAGAAGAG AATGTAGACGACTTATCTAATGATTTCTCGAGCACATTTATGCTTGATGAAGAGATGGAG CTTGAAAATAAAAAGGACCAGTCCTCTTTGAGTGGAAGAGTTGAGGAAGAAGATGACGAG ATGTACGTTAATGACGAGGCTATTGAGAAACTTGTCATTGTAACTCGGAACACTCGGGCA TCTCAGGTATCTGGAACTGTTGGAAAAGAATCAAAACCAATATCTACTGAGCTTGCTTCT GCAATAAATGATGGTCTCTACTTCTATGAGCAGGAGCTTAAAGCTACACGATCCAGTCAT AGATCTAACAACTCCAATAATGATCCTAGAGATGACATTAGTAGGTCTTTTGGTACTGGT GCTGCTTTATCCAAATCAAAGTATGCCGATCATTCTTCTGGAGGAAAAAACACTGAAGGT CCTGGAAGTTCCAACTCCCGGAGAAAGCAAAACAAAGGATTTGCTAAGCCACATCCAATA CATAAGCAGCGGCTGTTTTCTGGAAATTACCGGAATCATGGGGTTTCTCGGAACAGTGTA GGAGCAATATCTGAAAGTCCACCTAGCGATTCAGTTGGGTTTTTCTTTGGTTCTACACCT CCTGACAGTCATGTGTCTAGGCCTTCAAAGTTGAGTGCCTCTCCGCACAGCAATCTTGCT AGTAATAGTCCGCCAGTTGGTTCCATGCCTAAACCATTTCCACCCTTCCAGCATCCAAGT CACAAGCTGCTACAAGAAAATGGTTTTACACAGCAGCTGTACAAGAAGTATCATAAGCGC TGTCTGACTGATCGCAAGAAACTTGGAATTGGTTGCAGTGAGGAAATGAATACACTGTAC AGGTTTTGGTCGTATTTTCTGCGGAACATGTTCATACGTTCTATGTACAATGAGTTCCAA AAGATGGCTCAAGAAGATGCAGCTGCTAATTATAACTATGGGATGGAGTGCCTATTTAGA TTTTATAGTTACGGTTTGGAAAAGGAATTTAGAGAGGACCTTTATGACGACTTTGAGAGA TTGACGCTTGACACCTACAATAGGGGAAACCTTTACGGCCTTGAGAAGTACTGGGCCTTT CACCATTTCCGTCAGCAACGAGGTCAGAGAGCACCTTTGAAGAAGCTTCCAGAACTGGAT AGACTACTCAGAGAAGAGTTCCGAAATTTGGATGACTTTAAACATGCCAGAGGAGGTGCC AGTGCAAGCACAAAGGAGGACGGTCACTAACCAACAGTGTGATTCTCAGCTTCATTGAAC CGTCTGTCAGCGAATTTTGATGCCTTACAGTCCATACAATGAGCTCAAGTTGCCGAATTA GCTTTCTGAGATGATCAAGGCAAAAATTTTGTATATAGAGCTTCTGTGAGGTTGGTTAAT TTTTACCTCCGAGGTTGAGCTAAAATTTTACCATGAGGGGATGCAACCTTGTGCCTTTTT GTACTTTCATCTTAGGATTATAAGGTGTACATATAGGAGGAAGTTGAAAACAAAATAAAA ATGAAAAAAAAAAATAAAAAAATGTAAAACTACCAAAAAA