Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g073530.2.1
CDS Infomation	Argonaute4c
Sequence	ATGCTCATTGTTGCAAATATAAGTCTTTTGAAACTTGTGGTCTTTTTCATACAGAAGATT GTCGTAATGGCTGAACAAGAGTATGGTGGATCCACAGAGGCTCTGCCCCCTCCTCCCCCT GTTCCACTTGATTTCTCTCCAGAAAAAGCTGAACCAGCGCCGGTGGAGAAAAAGTTATTA CGTGTTCCCATGGCTAGGCGTGGCCTTGGAAAGAAGGGACGCAATATTCAGATCCTTACC AATCATTTTCAAGTGAACGTATCTAATGTTGACGGACACTTCTTTCATTACAGTGTTGCT CTATTTTACGAGGATGGTCAACCTGTCGAGGTTAAAGGAATTGGCAGAAAAGTTCTGGAT AGAGTGCATGAAACATATCATGCAGAATTGGCTGGGAAGGGTTTTGCATATGATGGGGAG AAGAGTTTGTTCACCATTGGTTCATTACCTAGAAGTAGATTCGAGTTCACGGTTGTACTA AATGACATAACATCTAACCGGAACGTTGGAACCTCCAGCCCTCCTAATGAAGCTGATAGG AAAAGATTAAGGCGGCCGTATCAATCTAAAACTTATAAGGTGAAGATTAGCTTAGCTGGC AAGATTCCGATGCAGGCAATTGCAAATGCTTTTCGAGGTCAAGAGTATGAGAACTCTCAA GAAGCCTTACGAGTTCTGGATATAATTTTAAGGCAGCATGCTGCAAAAAAGGATTGCTTA CTCGTTCGTCAATCCTTTTTCCATAATGACTCAAATAACTTCGTTGATGTTGGAGGTGGT GTTCATGGCTTGAGAGGGTTCCATTCAAGTTTTCGAACCACTCAGTCTGGATTGTCTTTG AACATTGATATGTCTACCACAATGATAATAAAGCCTGGGCCAGTGCTTGACTTCTTGATA GCAAATCAAAATTCAAGAGATTCCGTTTCACTTGATTGGGCGAAGGCAAAACGCGTGTTG AAGAATTTGAAAGTGCAGACTGCTACCTCTAACCAAGAATTCAAAATAACTGGATTGAGT GAAAAATCTTGCCGTGAGCAGACGTTTATTCTAAAGCGAAGGAGCAAAGATGAGGATTGT GAAGTGCAAACTTCAGAAGTGACAGTTTACGATTACTTTGTTAATCATTGTAACATAGAC TTGCGATATTCTGCTGATTTGCCGTGCCTCAATGTTGGAAAGCCTAAACGTCCTACCTAT TTCCCCATTGAGCTCTGCACTTTGGTCTCATTACAAAGGTACACAAAAGCCTTGTCCACC TTTCAGAGGGCTTCCTTGGTGGAGAAGTCCAGGCAAAAGCCTCAGGAGAGAATGCAAATT TTGAGCCATGCTCTCAAAATGAACAATTATGATGCTGAGCCTCTGCTTCATTCTTGTGGT GTCACGATCAATAGCGACTTCACTCAGATTGAAGGGCGTGTGCTGTCTGCCCCTGAGTTG AAGGCAGGAAATGGAGTTGATATTTTCGCGCAAAGTGGCAGGTGGAACTTTAATAATAAG AGATTCTTTGAATCAGCAAAGGTAGAGAAATGGGCTGTTGTGAACTTCTCTACAAACTGT GATATCGGCAAACTAGTCGAATGTTTGACAGGACTTGGAGAGACGAAAGGAATTAGTGTG GAAGCTCCATTGAAAGTGTTTGAAGAGTCTCGACATCATAGAAGGGCTCCTCCTGTTGGC AGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGACGCCCCAAAGTTTCTT CTCTGTCTTCTTCCTGAGAGGAAAAATTGTGACATATATGGACCATGGAAGCGAAAAAAT CTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTAT CTGACAAACCTTCTCCTTAAGATCAATGCTAAGCTCGGTGGTTTAAATTCTATGTTAGCT GTTGAGGTTTCTCGTTCCATCCCCATGATATCTAAGGTCCCCACCATGATTCTTGGAATG GACGTATCACATGGCTCTCCCGGCCAGTCTGATGTCCCATCAATTGCTGCAGTTGTGAGT TCAAGGCAGTGGCCTTCAATATCTCATTACAGAGCTTCTGTGCGCACTCAATCTCCTAAA GTGGAGATAATTGATAACATATTTAAAGAAGTTTCAGACACTAGAGACGATGGGATTATG AGGGAACTTTTGCTAGATTTTCATGCGAGTTCCCAACAAAGGAAGCCTCAGCAAATCCTA GTATTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGAC CAGATCATTGAGGCCTGCAAGTTTCTAGATGAAAAGTGGTCGCCCAAGTTTGTTATCATT GTTGCACAGAAAAATCATCATACAAAGTTTTTCCCGTATGGATCTGCTAATAATGTTCCA CCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGC GCCCATGGTGGAATGATTGGTACGACTCGACCTACACATTACCATGTGTTGTTAGATGAA GTTGGTTTCAAACCTGATGAACTTCAAGAACTTGTTCATAATCTGTGCTATGTGTACCAG AGAAGCACTACTGCAACATCCATTGTGGCTCCGATAGGCTATGCCCATTTAGCCGCTGCA CAGGTTGGACAGTGGATGAAATCCGAGGGCACATCAGAGACATCATCAAGCCAGGATGGT CTGAGAAATGCTGGTCCAGTTACTGTTCCTCAGTTGCCCAGACTTCAGAAGAATGTTGCT AGCTCCATGTTCTTCTGTTGA

Peptide Sequence

PEP ID	Solyc06g073530.2.1
PEP Infomation	Argonaute4c
Sequence	MLIVANISLLKLVVFFIQKIVVMAEQEYGGSTEALPPPPPVPLDFSPEKAEPAPVEKKLL RVPMARRGLGKKGRNIQILTNHFQVNVSNVDGHFFHYSVALFYEDGQPVEVKGIGRKVLD RVHETYHAELAGKGFAYDGEKSLFTIGSLPRSRFEFTVVLNDITSNRNVGTSSPPNEADR KRLRRPYQSKTYKVKISLAGKIPMQAIANAFRGQEYENSQEALRVLDIILRQHAAKKDCL LVRQSFFHNDSNNFVDVGGGVHGLRGFHSSFRTTQSGLSLNIDMSTTMIIKPGPVLDFLI ANQNSRDSVSLDWAKAKRVLKNLKVQTATSNQEFKITGLSEKSCREQTFILKRRSKDEDC EVQTSEVTVYDYFVNHCNIDLRYSADLPCLNVGKPKRPTYFPIELCTLVSLQRYTKALST FQRASLVEKSRQKPQERMQILSHALKMNNYDAEPLLHSCGVTINSDFTQIEGRVLSAPEL KAGNGVDIFAQSGRWNFNNKRFFESAKVEKWAVVNFSTNCDIGKLVECLTGLGETKGISV EAPLKVFEESRHHRRAPPVGRVDKMFEEIQSKLPDAPKFLLCLLPERKNCDIYGPWKRKN LADHGIVTQCLAPGRVNDQYLTNLLLKINAKLGGLNSMLAVEVSRSIPMISKVPTMILGM DVSHGSPGQSDVPSIAAVVSSRQWPSISHYRASVRTQSPKVEIIDNIFKEVSDTRDDGIM RELLLDFHASSQQRKPQQILVFRDGVSESQFNQVLNIELDQIIEACKFLDEKWSPKFVII VAQKNHHTKFFPYGSANNVPPGTIIDNKVCHPRNNDFYLCAHGGMIGTTRPTHYHVLLDE VGFKPDELQELVHNLCYVYQRSTTATSIVAPIGYAHLAAAQVGQWMKSEGTSETSSSQDG LRNAGPVTVPQLPRLQKNVASSMFFC*

Transcript Sequence

Transcript ID	Solyc06g073530.2.1
Transcript Infomation	Argonaute4c
Sequence	ATGCTCATTGTTGCAAATATAAGTCTTTTGAAACTTGTGGTCTTTTTCATACAGAAGATT GTCGTAATGGCTGAACAAGAGTATGGTGGATCCACAGAGGCTCTGCCCCCTCCTCCCCCT GTTCCACTTGATTTCTCTCCAGAAAAAGCTGAACCAGCGCCGGTGGAGAAAAAGTTATTA CGTGTTCCCATGGCTAGGCGTGGCCTTGGAAAGAAGGGACGCAATATTCAGATCCTTACC AATCATTTTCAAGTGAACGTATCTAATGTTGACGGACACTTCTTTCATTACAGTGTTGCT CTATTTTACGAGGATGGTCAACCTGTCGAGGTTAAAGGAATTGGCAGAAAAGTTCTGGAT AGAGTGCATGAAACATATCATGCAGAATTGGCTGGGAAGGGTTTTGCATATGATGGGGAG AAGAGTTTGTTCACCATTGGTTCATTACCTAGAAGTAGATTCGAGTTCACGGTTGTACTA AATGACATAACATCTAACCGGAACGTTGGAACCTCCAGCCCTCCTAATGAAGCTGATAGG AAAAGATTAAGGCGGCCGTATCAATCTAAAACTTATAAGGTGAAGATTAGCTTAGCTGGC AAGATTCCGATGCAGGCAATTGCAAATGCTTTTCGAGGTCAAGAGTATGAGAACTCTCAA GAAGCCTTACGAGTTCTGGATATAATTTTAAGGCAGCATGCTGCAAAAAAGGATTGCTTA CTCGTTCGTCAATCCTTTTTCCATAATGACTCAAATAACTTCGTTGATGTTGGAGGTGGT GTTCATGGCTTGAGAGGGTTCCATTCAAGTTTTCGAACCACTCAGTCTGGATTGTCTTTG AACATTGATATGTCTACCACAATGATAATAAAGCCTGGGCCAGTGCTTGACTTCTTGATA GCAAATCAAAATTCAAGAGATTCCGTTTCACTTGATTGGGCGAAGGCAAAACGCGTGTTG AAGAATTTGAAAGTGCAGACTGCTACCTCTAACCAAGAATTCAAAATAACTGGATTGAGT GAAAAATCTTGCCGTGAGCAGACGTTTATTCTAAAGCGAAGGAGCAAAGATGAGGATTGT GAAGTGCAAACTTCAGAAGTGACAGTTTACGATTACTTTGTTAATCATTGTAACATAGAC TTGCGATATTCTGCTGATTTGCCGTGCCTCAATGTTGGAAAGCCTAAACGTCCTACCTAT TTCCCCATTGAGCTCTGCACTTTGGTCTCATTACAAAGGTACACAAAAGCCTTGTCCACC TTTCAGAGGGCTTCCTTGGTGGAGAAGTCCAGGCAAAAGCCTCAGGAGAGAATGCAAATT TTGAGCCATGCTCTCAAAATGAACAATTATGATGCTGAGCCTCTGCTTCATTCTTGTGGT GTCACGATCAATAGCGACTTCACTCAGATTGAAGGGCGTGTGCTGTCTGCCCCTGAGTTG AAGGCAGGAAATGGAGTTGATATTTTCGCGCAAAGTGGCAGGTGGAACTTTAATAATAAG AGATTCTTTGAATCAGCAAAGGTAGAGAAATGGGCTGTTGTGAACTTCTCTACAAACTGT GATATCGGCAAACTAGTCGAATGTTTGACAGGACTTGGAGAGACGAAAGGAATTAGTGTG GAAGCTCCATTGAAAGTGTTTGAAGAGTCTCGACATCATAGAAGGGCTCCTCCTGTTGGC AGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGACGCCCCAAAGTTTCTT CTCTGTCTTCTTCCTGAGAGGAAAAATTGTGACATATATGGACCATGGAAGCGAAAAAAT CTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTAT CTGACAAACCTTCTCCTTAAGATCAATGCTAAGCTCGGTGGTTTAAATTCTATGTTAGCT GTTGAGGTTTCTCGTTCCATCCCCATGATATCTAAGGTCCCCACCATGATTCTTGGAATG GACGTATCACATGGCTCTCCCGGCCAGTCTGATGTCCCATCAATTGCTGCAGTTGTGAGT TCAAGGCAGTGGCCTTCAATATCTCATTACAGAGCTTCTGTGCGCACTCAATCTCCTAAA GTGGAGATAATTGATAACATATTTAAAGAAGTTTCAGACACTAGAGACGATGGGATTATG AGGGAACTTTTGCTAGATTTTCATGCGAGTTCCCAACAAAGGAAGCCTCAGCAAATCCTA GTATTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGAC CAGATCATTGAGGCCTGCAAGTTTCTAGATGAAAAGTGGTCGCCCAAGTTTGTTATCATT GTTGCACAGAAAAATCATCATACAAAGTTTTTCCCGTATGGATCTGCTAATAATGTTCCA CCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGC GCCCATGGTGGAATGATTGGTACGACTCGACCTACACATTACCATGTGTTGTTAGATGAA GTTGGTTTCAAACCTGATGAACTTCAAGAACTTGTTCATAATCTGTGCTATGTGTACCAG AGAAGCACTACTGCAACATCCATTGTGGCTCCGATAGGCTATGCCCATTTAGCCGCTGCA CAGGTTGGACAGTGGATGAAATCCGAGGGCACATCAGAGACATCATCAAGCCAGGATGGT CTGAGAAATGCTGGTCCAGTTACTGTTCCTCAGTTGCCCAGACTTCAGAAGAATGTTGCT AGCTCCATGTTCTTCTGTTGA