Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g073490.1.1
CDS Infomation

LOW QUALITY:Chaperone protein ClpB 2 (AHRD V3.3 *** A0A1D1YLY8_9ARAE)
Sequence

ATGGTCATGCGGGGTTTTAGCTATTTGCAAAATCTGTGGCCTTTTTCTGTATTAAACCCC
ACTGATTTGAGAATTTCAGATGGGTTTGTGAGGAAATTAGGAATACCCGAAACTACCAAA
CAGTTCGTTTATGCAATTCAAGAACCTGAATCCAAGGCTGTTATATACGTATTGTGTGTG
CAGAATTTATCTGAGCGATCTGCTCTAGATGCGGAGTGTTTGATTAGGGAAGTTAAGCCT
GAGGCTGTAGTTGTCCAAGTGGGTAATTCTGGAGATGGTCATGAAAATGAGGGAATTGGG
TTGAGTGATGGTGGTGATTTAGAGGAGGAGGAGGAGTCGGTACCAACTTCGTCGATTGAG
GTTTTGAAGAGGTGTTTTGTGCATAAAACTAGTAAGGAGAAGTATGAGAATATGGCGGGG
CGAGTTGTTTTGAGAGAGATATTTGGGGTTGGGTTTGATGGGCATTTCCCTGCTGCCAAG
AAAGCAGCTGAAGAGGTTGGTTCGGCTTTCTTGTTGCTTGAGTCACCGTTTGTTCAATGC
AGTTTGTCTGGTGAGCCTTCTGATGTGGGGGATGAGGGGTTCGAGAATAAGTTTGGAGTG
TTTGGTTTGGAGGACGGGTATGAGAATAGGTTTGGAGTGTTTGGCTTAGAGGCTAGTAAT
AGTTTGGTTCCTCTAAGGACAGGGTTAATGGTGTCAGAAAATTCTAGAGGATTTCGTATT
ACAAATGATGTTCAGTCTCAGATGGTGAGGCTTTTGTCATCATATTTGGTCAATTCAAGT
TCCTTACAAAAGATTGGATCTGAGGATATTCAACAACAGTTGAATTATCAAGTACCACAG
TTTGCACAGACAGTTTATCCTTTGCTTCTGGATCTACATAATATTTTTGTTGATATTCCC
TCTATAGGAAGAGCTCTAGCTTGTGCTCAAAAGATGTTTCATGATGTTCGTAACGGAGAT
GCTGTTAATACAGATGTTCTTTCTGAGGTTTATGTCTTCAAGATTGCAGTTGAAGGGTTA
AGAATAGCTTTGAACAATGCTGGTCGGCTCCCACTTAGCAAAATGGGGAGTCATACAACT
GAATTTTCTGAGCTTTGTATTGAGGACAAGTCCCACGCCCTTCTTGCACAGGCCCTCCGA
AGCCAGACCGAGAAGTTCAAATCAATAGTTGCAGTAGTAGATGCCAGTGGCTTAGCTGGA
CTAAGGAAGCACTGGAGTGTTAATGTACCTGAGGAAGTTAAGGAAATTGTTGATCAGCTG
GTCACTGACTCTGAAAACGATGGGGACAATTCAAGCCAAAGTGACAAAAAAGGGTTACTA
GCTGTTAAGCCAGTGGTAGCTGTTGGGGCTGGTGCAACTGCAGTTCTGGGAGCTTCTTCA
TTTTCTAAAGTTGTTCCTGCATCTACAATATTGAAGGTTGTCACCTTCAAAGTCCCCGCT
TCTCTAAAAATCATGATTACTCAAACCCAAAAGGCCCTTGCTCTTGCATTTGGAAAGTCA
AACGTAGCAGGCCCTGCAATGGCAAGTTCTGGTGTCAAATCATCTGTCCTTAAGGCAACT
GCTTCTGCAGAGAAAATCCGTGCCATGGCGCATGGCGTTATAGCCTCTGCAGAGAAAACT
AGCATCTCAGCCATGAGAACGGCATTCTACGAAATCATGAGGAAACACCGAGTACGACCC
GTTGGCTTTCTGCCATGGGCCACCTTTGGATGCAGTGTAGTTACTTGTGCGAGCTTGCTT
GTGTATGGAGATGGAATAGAATGTGCTGCTGAATCTCTTCCAGCAGCTCCTTCAATCGCC
AGTTTGGGTCGTGGAATCCAAAGTTTGCATCAAGCTTCCCTGGCAGTGAAACAAACAGAA
AATTCCAGGATACAAAAGTCAATAGAGTCTCTTGTGTACAGATTTAAGAAGATAAGTATC
TCATAA

Peptide Sequence

PEP ID

Solyc06g073490.1.1
PEP Infomation

LOW QUALITY:Chaperone protein ClpB 2 (AHRD V3.3 *** A0A1D1YLY8_9ARAE)
Sequence

MVMRGFSYLQNLWPFSVLNPTDLRISDGFVRKLGIPETTKQFVYAIQEPESKAVIYVLCV
QNLSERSALDAECLIREVKPEAVVVQVGNSGDGHENEGIGLSDGGDLEEEEESVPTSSIE
VLKRCFVHKTSKEKYENMAGRVVLREIFGVGFDGHFPAAKKAAEEVGSAFLLLESPFVQC
SLSGEPSDVGDEGFENKFGVFGLEDGYENRFGVFGLEASNSLVPLRTGLMVSENSRGFRI
TNDVQSQMVRLLSSYLVNSSSLQKIGSEDIQQQLNYQVPQFAQTVYPLLLDLHNIFVDIP
SIGRALACAQKMFHDVRNGDAVNTDVLSEVYVFKIAVEGLRIALNNAGRLPLSKMGSHTT
EFSELCIEDKSHALLAQALRSQTEKFKSIVAVVDASGLAGLRKHWSVNVPEEVKEIVDQL
VTDSENDGDNSSQSDKKGLLAVKPVVAVGAGATAVLGASSFSKVVPASTILKVVTFKVPA
SLKIMITQTQKALALAFGKSNVAGPAMASSGVKSSVLKATASAEKIRAMAHGVIASAEKT
SISAMRTAFYEIMRKHRVRPVGFLPWATFGCSVVTCASLLVYGDGIECAAESLPAAPSIA
SLGRGIQSLHQASLAVKQTENSRIQKSIESLVYRFKKISIS*

Transcript Sequence

Transcript ID

Solyc06g073490.1.1
Transcript Infomation

LOW QUALITY:Chaperone protein ClpB 2 (AHRD V3.3 *** A0A1D1YLY8_9ARAE)
Sequence

ATGGTCATGCGGGGTTTTAGCTATTTGCAAAATCTGTGGCCTTTTTCTGTATTAAACCCC
ACTGATTTGAGAATTTCAGATGGGTTTGTGAGGAAATTAGGAATACCCGAAACTACCAAA
CAGTTCGTTTATGCAATTCAAGAACCTGAATCCAAGGCTGTTATATACGTATTGTGTGTG
CAGAATTTATCTGAGCGATCTGCTCTAGATGCGGAGTGTTTGATTAGGGAAGTTAAGCCT
GAGGCTGTAGTTGTCCAAGTGGGTAATTCTGGAGATGGTCATGAAAATGAGGGAATTGGG
TTGAGTGATGGTGGTGATTTAGAGGAGGAGGAGGAGTCGGTACCAACTTCGTCGATTGAG
GTTTTGAAGAGGTGTTTTGTGCATAAAACTAGTAAGGAGAAGTATGAGAATATGGCGGGG
CGAGTTGTTTTGAGAGAGATATTTGGGGTTGGGTTTGATGGGCATTTCCCTGCTGCCAAG
AAAGCAGCTGAAGAGGTTGGTTCGGCTTTCTTGTTGCTTGAGTCACCGTTTGTTCAATGC
AGTTTGTCTGGTGAGCCTTCTGATGTGGGGGATGAGGGGTTCGAGAATAAGTTTGGAGTG
TTTGGTTTGGAGGACGGGTATGAGAATAGGTTTGGAGTGTTTGGCTTAGAGGCTAGTAAT
AGTTTGGTTCCTCTAAGGACAGGGTTAATGGTGTCAGAAAATTCTAGAGGATTTCGTATT
ACAAATGATGTTCAGTCTCAGATGGTGAGGCTTTTGTCATCATATTTGGTCAATTCAAGT
TCCTTACAAAAGATTGGATCTGAGGATATTCAACAACAGTTGAATTATCAAGTACCACAG
TTTGCACAGACAGTTTATCCTTTGCTTCTGGATCTACATAATATTTTTGTTGATATTCCC
TCTATAGGAAGAGCTCTAGCTTGTGCTCAAAAGATGTTTCATGATGTTCGTAACGGAGAT
GCTGTTAATACAGATGTTCTTTCTGAGGTTTATGTCTTCAAGATTGCAGTTGAAGGGTTA
AGAATAGCTTTGAACAATGCTGGTCGGCTCCCACTTAGCAAAATGGGGAGTCATACAACT
GAATTTTCTGAGCTTTGTATTGAGGACAAGTCCCACGCCCTTCTTGCACAGGCCCTCCGA
AGCCAGACCGAGAAGTTCAAATCAATAGTTGCAGTAGTAGATGCCAGTGGCTTAGCTGGA
CTAAGGAAGCACTGGAGTGTTAATGTACCTGAGGAAGTTAAGGAAATTGTTGATCAGCTG
GTCACTGACTCTGAAAACGATGGGGACAATTCAAGCCAAAGTGACAAAAAAGGGTTACTA
GCTGTTAAGCCAGTGGTAGCTGTTGGGGCTGGTGCAACTGCAGTTCTGGGAGCTTCTTCA
TTTTCTAAAGTTGTTCCTGCATCTACAATATTGAAGGTTGTCACCTTCAAAGTCCCCGCT
TCTCTAAAAATCATGATTACTCAAACCCAAAAGGCCCTTGCTCTTGCATTTGGAAAGTCA
AACGTAGCAGGCCCTGCAATGGCAAGTTCTGGTGTCAAATCATCTGTCCTTAAGGCAACT
GCTTCTGCAGAGAAAATCCGTGCCATGGCGCATGGCGTTATAGCCTCTGCAGAGAAAACT
AGCATCTCAGCCATGAGAACGGCATTCTACGAAATCATGAGGAAACACCGAGTACGACCC
GTTGGCTTTCTGCCATGGGCCACCTTTGGATGCAGTGTAGTTACTTGTGCGAGCTTGCTT
GTGTATGGAGATGGAATAGAATGTGCTGCTGAATCTCTTCCAGCAGCTCCTTCAATCGCC
AGTTTGGGTCGTGGAATCCAAAGTTTGCATCAAGCTTCCCTGGCAGTGAAACAAACAGAA
AATTCCAGGATACAAAAGTCAATAGAGTCTCTTGTGTACAGATTTAAGAAGATAAGTATC
TCATAA