Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g073400.3.1
CDS Infomation

Endonuclease III homolog (AHRD V3.3 *** K4C959_SOLLC)
Sequence

ATGTCTGTCTCTCTTCTGAGAAACACTGCGTTTCTTCCCTCAATCTCACTTGGAATTCAA
ACCATTTCCTCAGCCAAAATGCGAAGAACACGAAGTTCCCTCAACCAAGAAACCCCTTCT
CAGAAAAACCCAGGTTGTGATGGCACAGGTGGAAGCTCCGTTCCTGAACTCCGTGTTTTC
ATCCGAAGAAAGAGAGTTAAAAAGACTGTGGAAGTCATAGCCAAAGAGGTCAAGGAAGAA
TCTTCTGGCAAAAAAGTTATGCTTGTTAGACTGCCTGATATAGAGGATTTTTCCTATTCG
AAGGACATTACACATCCCCAGTCAACACCTTCCAAAACTGTGCGTTTGACAGGAGAAAAA
ACTCTACCCCAGTTGATGCAAACAGAAATTAAAGGCTTCAGTCTATCTGATCCACTACAA
CCACCGTCGAACTGGGAAAAAGTCCTTGAAGGGATCCGTAAGATGAGATCTGCAGAAGAT
GCACCTGTAGACTCCATGGGTTGTGAGAAAGCTGGGAGTTCACTTCCTGCCAAGGAAAGA
AGATTTGCAGTCCTTGTATCATCACTCTTATCAAGCCAGACCAAAGATCAAGTTAATCAT
GGAGCTGTCCAGCGTCTCCTTCAAAATGGCTTGCTTGCTGCAGATGCCATTGACTCAGCC
AATGAAGAAACAATCAAGAGTTTGATATATCCAGTGGGGTTTTACACACGAAAAGCTAGC
AACCTGAAAAAAGTAGCAAAAATTTGTCTATCAAAATACAATGGGGACATCCCTAGTTCA
TTGGAAGAATTGCTTCTGCTCCCAGGAATTGGTCCCAAGATGGCTCATCTAGTTATGAAT
GTTGCATGGGAAAACGTCCAAGGGATATGTGTAGATACTCATGTGCATCGTATTTCTAAT
CGGCTTGAATGGGTATCACGTCCTGGAACTAAGCAGAAAACGAGAACCCCTGAGGAGACT
AGGGAGTCCTTGCAACTTTGGCTTCCAAAGGAAGAATGGGTGCCAATCAATCCTCTCTTG
GTTGGGTTTGGTCAGACCATTTGTACTCCTTTAAGACCACGTTGTGCAATCTGTACAGTA
AGTGATCTCTGCCCATCAGCATTCAAAGAGGCAGCAAGCCCATCGTCCACACCCAAGAAG
TGA

Peptide Sequence

PEP ID

Solyc06g073400.3.1
PEP Infomation

Endonuclease III homolog (AHRD V3.3 *** K4C959_SOLLC)
Sequence

MSVSLLRNTAFLPSISLGIQTISSAKMRRTRSSLNQETPSQKNPGCDGTGGSSVPELRVF
IRRKRVKKTVEVIAKEVKEESSGKKVMLVRLPDIEDFSYSKDITHPQSTPSKTVRLTGEK
TLPQLMQTEIKGFSLSDPLQPPSNWEKVLEGIRKMRSAEDAPVDSMGCEKAGSSLPAKER
RFAVLVSSLLSSQTKDQVNHGAVQRLLQNGLLAADAIDSANEETIKSLIYPVGFYTRKAS
NLKKVAKICLSKYNGDIPSSLEELLLLPGIGPKMAHLVMNVAWENVQGICVDTHVHRISN
RLEWVSRPGTKQKTRTPEETRESLQLWLPKEEWVPINPLLVGFGQTICTPLRPRCAICTV
SDLCPSAFKEAASPSSTPKK*

Transcript Sequence

Transcript ID

Solyc06g073400.3.1
Transcript Infomation

Endonuclease III homolog (AHRD V3.3 *** K4C959_SOLLC)
Sequence

AGGTTATTTTATTATAATATTCAAAAAAATAATTATTTATTTTTGAATATATTTATTAAA
TAAACTAAATTTATCAATAATTAAGTTATTTAACATTGAGCTTCTTCTTCTTTTCAATTT
TTGATGCTGGCTCCGAGAATCAAGAAACGAAACTATGGTTTTGTTTTAACCAAAAATGTC
TGTCTCTCTTCTGAGAAACACTGCGTTTCTTCCCTCAATCTCACTTGGAATTCAAACCAT
TTCCTCAGCCAAAATGCGAAGAACACGAAGTTCCCTCAACCAAGAAACCCCTTCTCAGAA
AAACCCAGGTTGTGATGGCACAGGTGGAAGCTCCGTTCCTGAACTCCGTGTTTTCATCCG
AAGAAAGAGAGTTAAAAAGACTGTGGAAGTCATAGCCAAAGAGGTCAAGGAAGAATCTTC
TGGCAAAAAAGTTATGCTTGTTAGACTGCCTGATATAGAGGATTTTTCCTATTCGAAGGA
CATTACACATCCCCAGTCAACACCTTCCAAAACTGTGCGTTTGACAGGAGAAAAAACTCT
ACCCCAGTTGATGCAAACAGAAATTAAAGGCTTCAGTCTATCTGATCCACTACAACCACC
GTCGAACTGGGAAAAAGTCCTTGAAGGGATCCGTAAGATGAGATCTGCAGAAGATGCACC
TGTAGACTCCATGGGTTGTGAGAAAGCTGGGAGTTCACTTCCTGCCAAGGAAAGAAGATT
TGCAGTCCTTGTATCATCACTCTTATCAAGCCAGACCAAAGATCAAGTTAATCATGGAGC
TGTCCAGCGTCTCCTTCAAAATGGCTTGCTTGCTGCAGATGCCATTGACTCAGCCAATGA
AGAAACAATCAAGAGTTTGATATATCCAGTGGGGTTTTACACACGAAAAGCTAGCAACCT
GAAAAAAGTAGCAAAAATTTGTCTATCAAAATACAATGGGGACATCCCTAGTTCATTGGA
AGAATTGCTTCTGCTCCCAGGAATTGGTCCCAAGATGGCTCATCTAGTTATGAATGTTGC
ATGGGAAAACGTCCAAGGGATATGTGTAGATACTCATGTGCATCGTATTTCTAATCGGCT
TGAATGGGTATCACGTCCTGGAACTAAGCAGAAAACGAGAACCCCTGAGGAGACTAGGGA
GTCCTTGCAACTTTGGCTTCCAAAGGAAGAATGGGTGCCAATCAATCCTCTCTTGGTTGG
GTTTGGTCAGACCATTTGTACTCCTTTAAGACCACGTTGTGCAATCTGTACAGTAAGTGA
TCTCTGCCCATCAGCATTCAAAGAGGCAGCAAGCCCATCGTCCACACCCAAGAAGTGACA
TCTGATGGAATTTCATCAAGTTTTGCAGTGAGGGCACAGTTTTCTCCCATAACAATACTA
TTTTTTACTTGAGCAATAGACAAATTTTGTGCTCTTAGCTCATATTTTGTCCGTGTTTTT
CGTTCTTTTTCTTGATGGGCTGGAAAGAAAACGCTTGGTTTTGTTTGGTGGAAGGATGTG
GATAAGTTGAAAACTGGCAAAGTACATTCTGTAAAATTAGTTCCATTTTGTACAGTTCAC
TATCCTGCAATGCATGGAGGTAGTAAGATCATGTTTTGGTTTGATATCAAGGGAAAGTTT
TTCCAAGCTAACAATATTTTGTATTGATACTATTTGCTACATTCTTCAGATTATCATTTT
TTTTTATTTACTTTGATAAAGATGGAGAATACTACTCTTATATTTACTTTGCTAAAGATG
GAGAATACTACTCTTACTTCACATTAATGTGTGCTTCATAAAAGAACACCTACTAAAATT
TTCAAGATCTAACTCGACATGGGAAGTAACAGTGAATTATACACATGCTACCTGCCTTCC
AGAGTATTTTAAGTCACCAAAAGTATCAATAAGCTATGCATCCATATCCAAAACTTACAA
AACATAGCAGAGCCAAAACTCAAGGCAGTACAAAAAGTCATCGAAAGTGACCTATTTTGA
GTAGTACAATGTTGCCAATCACAGTTTTTTTAGTTCTTCGTGATATTCAGTCACTTCCCA
GCACATGTGCCCGAAGGATCACCTTAGATGCAAGTATGTATTTCGTAAACACAGTACAAT
ATTCTCACAAGTCATTCTTGAACACTCAAATTAGCCAACCTCTCTGCATTCTGACTCTGA
AGTAATTGAACCCGAACCATGCTCTTGCGCCAATTCCAATATTTTACTCTCATTGGATCA
GCATGTTCCAAGATGGAACAAATTTTCTTTGTCAGTGCTAAATCTGGTGAGCATGACTGG
GGAGTAAGAACATCTACAGCACTTTTCAATTCTTGGCTCGGTTCAAAATCATGACAAAGA
AGATCCAACAAGAACCTCAGAGCGTGCACATGACTATTTTGGGAGGTTAAGACGTCCAAA
AGTACTGATGCTACTTGAGAATCCTGAACTAGAGATTGTGTATCATTCTTGTAAAGACCA
CGAAGATACCTCCAAGGACTTTCATTCTCTGGACTAGCTCTGATGGCTTGAACTGTGTAA
TTCACTTCCAATTCCCTCATTGCCACTAGGCCCCCTAGTAGAGGTGATCGTGTTACGACA
AAGTATCTCTACAAGAAACAAAGAAAAGTTTAGAGCGACACTTCCTTCACAAAGGATTTT
TACCCTTCTAATAAT