Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g073330.3.1
CDS Infomation

Lysine--tRNA ligase (AHRD V3.3 *** K4C952_SOLLC)
Sequence

ATGGGGAAATCAGAAAAAAAGCCAGCCTCTCAGCCCCAGAAAGTGGAGAAGAAGCCAGCT
GCTCAGTCACAGAAGAATTCTGCAGCCGATGATGACATGGATCCAACGCAATACTTCGAA
AATAGGCTGAAAGCACTTGCAGCTGAAAAGGAAAATGGGCAGAACCCTTACCCACACAAA
TTCCAAGGGGAAAACCATATGTCTATCCCTAAATTTGTCAATAAATACGGAGTTTTAGAG
AGTGGAGTTCACTCCGAAGATGAAGTGTCCTTGACTGGAAGGATAATGAACAAACGTGCC
TCTTCTGCAAAGCTGCTTTTCTATGATTTACATGGTGAAGGTGCCAAAGTTCAAGTCATG
ACAAGTGCAAGAGATTCTGTGTTGAATGAAGAAGACTTCATTAAATTTCATTCTGGTGTG
AAGCGTGGTGATATTGTAGGAATTACTGGATGTCCAGGTGTGGGATTCTTATTTCCTGTT
AGTTTAGTGACAGTTGTTATCTGTGGTAGTGTTGGTCTTGGCGGTAAGAGTAAAAGGGGA
GAGCTGAGTATTTTTCCCAAATCATTCATAGTGTTATCTCACTGTCTTCATATGATGCCA
CGGCAGAAAGGTGCCCAGACAGAGACAGCTAAGAATCCTGAAGCATGGGTCCCCGGAAGT
GGCCGCAATCCAGATTCGTATGTGTTAAAGGATCAGGAAACACGATATAGACAGCGTTAT
TTGGATTTGATGCTGAACTTAGAGGTCCGCCACATATTTAAAACCCGTGCAAAGATCATA
ACTTTTATTCGAAGCTTTCTTGATAACCGTGACTTCCTAGAGGTAGAGACCCCCATGATG
AACATGATTGCTGGTGGGGCAGCTGCACGTCCATTTGTGACCCACCACAATGATTTGAAT
ATGAGGCTTTTCATGCGTATTGCTCCTGAACTCTATCTTAAAGAGCTGGTTGTTGGTGGC
TTGGATCGTGTCTATGAGATTGGGAAACAATTTAGAAACGAGGGAATTGACTTGACGCAC
AATCCTGAATTCACCACTTGCGAGTTTTATATGGCATATGCAGATTACAATGACTTGATG
GAGCTAACTGAAAATATGCTAAGTGGGATGGTGAAGGAACTTACAGGTGGCTATATAATC
AAGTATCATGCGAAAGGGTTGGAGAGTGACCCAATTGAAATTGACTTCACTCCTCCCTTC
AGACGGATTGATATGGTAGAGGAATTGGAGAAGATTGCAAACTTGAATATACCCAAGGAT
CTCTCAAGTGATGAAACCAACAAATATCTCATAGATGCTTGCGCGAAGTTTGAGATCAGA
TGTCCTCCACCTCTAACAACAACTAGATTACTTGATAAACTTGTGGGACACTTTCTGGAG
GAGACATGTGTTAACCCTACTTTCATTATCAACCATCCAGAGATAATGAGTCCTTTGGCA
AAGTGGCACAGATCGAAACCAGGCCTGACAGAACGTTTTGAACTGTTTATAAACAAACAT
GAACTCTGTAATGCATACACCGAGTTGAATGACCCTGTTGTCCAACGCCAGCGCTTTGCT
GATCAACTCAAGGACCGACAATCAGGTGATGATGAAGCTATGGCACTGGATGAGAACTTT
TGCACCGCTCTTGAATATGGATTACCTCCTACTGGTGGTTGGGGATTGGGTATTGACCGA
CTTGCAATGTTGTTGACAGATTCACAAAACATTAAGGAAGTTCTTCTCTTTCCAGCCATG
AAGCCACAGGATGAGCCAACTTCCAAGGAAAGCAATAAAAAACCTCAGGAGGAAGCCAAG
CCTCAGGATGGACAAGCCAAACCTCAGGATGAACTTACAATGAAAGATGTGGAAAAGCAG
ATTTCCGACATCAAAATGAACTGA

Peptide Sequence

PEP ID

Solyc06g073330.3.1
PEP Infomation

Lysine--tRNA ligase (AHRD V3.3 *** K4C952_SOLLC)
Sequence

MGKSEKKPASQPQKVEKKPAAQSQKNSAADDDMDPTQYFENRLKALAAEKENGQNPYPHK
FQGENHMSIPKFVNKYGVLESGVHSEDEVSLTGRIMNKRASSAKLLFYDLHGEGAKVQVM
TSARDSVLNEEDFIKFHSGVKRGDIVGITGCPGVGFLFPVSLVTVVICGSVGLGGKSKRG
ELSIFPKSFIVLSHCLHMMPRQKGAQTETAKNPEAWVPGSGRNPDSYVLKDQETRYRQRY
LDLMLNLEVRHIFKTRAKIITFIRSFLDNRDFLEVETPMMNMIAGGAAARPFVTHHNDLN
MRLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAYADYNDLM
ELTENMLSGMVKELTGGYIIKYHAKGLESDPIEIDFTPPFRRIDMVEELEKIANLNIPKD
LSSDETNKYLIDACAKFEIRCPPPLTTTRLLDKLVGHFLEETCVNPTFIINHPEIMSPLA
KWHRSKPGLTERFELFINKHELCNAYTELNDPVVQRQRFADQLKDRQSGDDEAMALDENF
CTALEYGLPPTGGWGLGIDRLAMLLTDSQNIKEVLLFPAMKPQDEPTSKESNKKPQEEAK
PQDGQAKPQDELTMKDVEKQISDIKMN*

Transcript Sequence

Transcript ID

Solyc06g073330.3.1
Transcript Infomation

Lysine--tRNA ligase (AHRD V3.3 *** K4C952_SOLLC)
Sequence

CGTTTAATCTAAAGTTAGGTGCTGCACAAATACGCTAAAACCCTAGCCTCCATATCCATT
TCCCTTTCAGCTCTACACTCTGCCTCTGTTTTTACAGTTACACTTGCATCAACAAATTGT
CGGCTGCTCCGGTCGCCGCCGTCAGCAATGGGGAAATCAGAAAAAAAGCCAGCCTCTCAG
CCCCAGAAAGTGGAGAAGAAGCCAGCTGCTCAGTCACAGAAGAATTCTGCAGCCGATGAT
GACATGGATCCAACGCAATACTTCGAAAATAGGCTGAAAGCACTTGCAGCTGAAAAGGAA
AATGGGCAGAACCCTTACCCACACAAATTCCAAGGGGAAAACCATATGTCTATCCCTAAA
TTTGTCAATAAATACGGAGTTTTAGAGAGTGGAGTTCACTCCGAAGATGAAGTGTCCTTG
ACTGGAAGGATAATGAACAAACGTGCCTCTTCTGCAAAGCTGCTTTTCTATGATTTACAT
GGTGAAGGTGCCAAAGTTCAAGTCATGACAAGTGCAAGAGATTCTGTGTTGAATGAAGAA
GACTTCATTAAATTTCATTCTGGTGTGAAGCGTGGTGATATTGTAGGAATTACTGGATGT
CCAGGTGTGGGATTCTTATTTCCTGTTAGTTTAGTGACAGTTGTTATCTGTGGTAGTGTT
GGTCTTGGCGGTAAGAGTAAAAGGGGAGAGCTGAGTATTTTTCCCAAATCATTCATAGTG
TTATCTCACTGTCTTCATATGATGCCACGGCAGAAAGGTGCCCAGACAGAGACAGCTAAG
AATCCTGAAGCATGGGTCCCCGGAAGTGGCCGCAATCCAGATTCGTATGTGTTAAAGGAT
CAGGAAACACGATATAGACAGCGTTATTTGGATTTGATGCTGAACTTAGAGGTCCGCCAC
ATATTTAAAACCCGTGCAAAGATCATAACTTTTATTCGAAGCTTTCTTGATAACCGTGAC
TTCCTAGAGGTAGAGACCCCCATGATGAACATGATTGCTGGTGGGGCAGCTGCACGTCCA
TTTGTGACCCACCACAATGATTTGAATATGAGGCTTTTCATGCGTATTGCTCCTGAACTC
TATCTTAAAGAGCTGGTTGTTGGTGGCTTGGATCGTGTCTATGAGATTGGGAAACAATTT
AGAAACGAGGGAATTGACTTGACGCACAATCCTGAATTCACCACTTGCGAGTTTTATATG
GCATATGCAGATTACAATGACTTGATGGAGCTAACTGAAAATATGCTAAGTGGGATGGTG
AAGGAACTTACAGGTGGCTATATAATCAAGTATCATGCGAAAGGGTTGGAGAGTGACCCA
ATTGAAATTGACTTCACTCCTCCCTTCAGACGGATTGATATGGTAGAGGAATTGGAGAAG
ATTGCAAACTTGAATATACCCAAGGATCTCTCAAGTGATGAAACCAACAAATATCTCATA
GATGCTTGCGCGAAGTTTGAGATCAGATGTCCTCCACCTCTAACAACAACTAGATTACTT
GATAAACTTGTGGGACACTTTCTGGAGGAGACATGTGTTAACCCTACTTTCATTATCAAC
CATCCAGAGATAATGAGTCCTTTGGCAAAGTGGCACAGATCGAAACCAGGCCTGACAGAA
CGTTTTGAACTGTTTATAAACAAACATGAACTCTGTAATGCATACACCGAGTTGAATGAC
CCTGTTGTCCAACGCCAGCGCTTTGCTGATCAACTCAAGGACCGACAATCAGGTGATGAT
GAAGCTATGGCACTGGATGAGAACTTTTGCACCGCTCTTGAATATGGATTACCTCCTACT
GGTGGTTGGGGATTGGGTATTGACCGACTTGCAATGTTGTTGACAGATTCACAAAACATT
AAGGAAGTTCTTCTCTTTCCAGCCATGAAGCCACAGGATGAGCCAACTTCCAAGGAAAGC
AATAAAAAACCTCAGGAGGAAGCCAAGCCTCAGGATGGACAAGCCAAACCTCAGGATGAA
CTTACAATGAAAGATGTGGAAAAGCAGATTTCCGACATCAAAATGAACTGAATCAGATCA
TAGATATATTGACGCGGAGTTCCTGCTGCTCCAGGAGTACCATTTTTGTTATACCTTTTT
TTTCTTTTACTATTTGATTAATGGTAATTGTCTATTGTAATGGCAAATGCTGTCTTTAAT
TCGTTAGTATCAGAAACTTTACTCGTATACTTATGAATATGGTTGTATTTGTCAAAATAC
TTTTAGATGTATTCATGATTATGCTCTCTATTCCTTCCATGTCTTCTTTTATTCCATTTG
TTCTTTGCTTATCCTCACTGATGAGAGAGGAAGTTAAGCATACTGCTACTGTAATTTCTA
ACATGAAAAATCAACTCTGAAGAAAAATTACGTTATAGTGAAATATAATTATAAATTTTA
TAGTGGATGCTTGTCAAACCAA