Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g072830.3.1
CDS Infomation

WD40 repeat-containing protein (AHRD V3.3 *** A0A103YEC3_CYNCS)
Sequence

ATGGATGCAGGATCATTGAGTTCTGTCTCAGCAAGTAAGAACAAATCTCGTTGCCCTCTT
CAGGAACAATATCTACAAAAGAGAAATTCTCGGGATAATTTGGATAGGTTCATTCCTAAT
CGTTCGGCAATGGATATGGACTATGCACATTACATGTTGACAGAGGGAAGGAAAGGTAAG
GAAAATCCAGCTGTTGATTCTCCCTCCAGAGAGGCATACAGGAAGCAGCTTGCGGAAACA
TTCAACATGAACAGGTCCCGCATATTGGCGTTCAAGAACAAGCCACCCACTTCTGTTGAG
GGTATTCCAAACGACTTCTCATCATCTGTTCACCAACAGGCGAAGACTGCTAAACCGCGT
CGATACATTCCTCAGACCTCTGAAAGGACATTAGATGCTCCAGATCTAGTGGATGACTAC
TATTTGAATTTGTTAGATTGGGGCAGCAGCAATGTTCTTTCTATTGCTCTAGGCAGCACT
GTATATCTGTGGGATGCATCTGATGGTGCCACTTCAGAATTGGTCACTGTTGACGAAGAG
CATGGTCCTGTTACAAGTGTTAAATGGGCTCCTGATGGTAGACATATTGCTCTTGGTTTG
AACAATTCCGATGTTCAGCTCTGGGATACAACGGCAAATCGGCTGCTGAGAACTATGAGA
GGTGGTCACAGATCCCGAGTTGGCGCTCTAGATTGGAACAATCACTTATTAACAACTGGG
GGCATGGATGGTCAGATCAGAAACAATGATGTGAGAGTGAGATCGCCAATTGTTGATACC
TACCAAGGACATAACCAAGAAGTTTGTGGTTTAAAATGGTCAGCCTCTGGTCAACAATTA
GCTAGTGGTGGAAATGATAATCTCCTCCATATATGGGACAGGTCAATGGCTTCTTCCAAC
ACATCAACAGAGTGGCTTCACAGGCTTGAAGATCATACAGCTGCCGTTAAGGCCCTTGCT
TGGTGTCCTTTCCAGGGTAACTTACTAGCCTCTGGTGGTGGTGGAGGTGACAGGTCCATT
AAGTTCTGGAACACCCATACTGGTGCTTGCTTGAACTCTATCGATACAGGCTCTCAGGTT
TGTGCCCTGCTATGGAACAAGAACGAACGTGAGCTCCTAAGTTCACATGGTTTCACAAAG
AATCAGCTCACTCTTTGGAAATACCCTTCCATGGTAAAGACAGCCGAGCTCACTGGTCAC
ACATCCAGAGTTCTTTTTATGGCACAGAGTCCAGATGGTTGCACGGTGGCATCTGCAGCT
GGGGATGAAACTCTTAGATTTTGGAATGTATTTGGTACTCCTGAAGTTGCAAAGCCTGCA
CCAAAGGCAAACACTGAGCCATTTGCTCACCTTAACCGTATTCGGTGA

Peptide Sequence

PEP ID

Solyc06g072830.3.1
PEP Infomation

WD40 repeat-containing protein (AHRD V3.3 *** A0A103YEC3_CYNCS)
Sequence

MDAGSLSSVSASKNKSRCPLQEQYLQKRNSRDNLDRFIPNRSAMDMDYAHYMLTEGRKGK
ENPAVDSPSREAYRKQLAETFNMNRSRILAFKNKPPTSVEGIPNDFSSSVHQQAKTAKPR
RYIPQTSERTLDAPDLVDDYYLNLLDWGSSNVLSIALGSTVYLWDASDGATSELVTVDEE
HGPVTSVKWAPDGRHIALGLNNSDVQLWDTTANRLLRTMRGGHRSRVGALDWNNHLLTTG
GMDGQIRNNDVRVRSPIVDTYQGHNQEVCGLKWSASGQQLASGGNDNLLHIWDRSMASSN
TSTEWLHRLEDHTAAVKALAWCPFQGNLLASGGGGGDRSIKFWNTHTGACLNSIDTGSQV
CALLWNKNERELLSSHGFTKNQLTLWKYPSMVKTAELTGHTSRVLFMAQSPDGCTVASAA
GDETLRFWNVFGTPEVAKPAPKANTEPFAHLNRIR*

Transcript Sequence

Transcript ID

Solyc06g072830.3.1
Transcript Infomation

WD40 repeat-containing protein (AHRD V3.3 *** A0A103YEC3_CYNCS)
Sequence

ATGGATGCAGGATCATTGAGTTCTGTCTCAGCAAGTAAGAACAAATCTCGTTGCCCTCTT
CAGGAACAATATCTACAAAAGAGAAATTCTCGGGATAATTTGGATAGGTTCATTCCTAAT
CGTTCGGCAATGGATATGGACTATGCACATTACATGTTGACAGAGGGAAGGAAAGGTAAG
GAAAATCCAGCTGTTGATTCTCCCTCCAGAGAGGCATACAGGAAGCAGCTTGCGGAAACA
TTCAACATGAACAGGTCCCGCATATTGGCGTTCAAGAACAAGCCACCCACTTCTGTTGAG
GGTATTCCAAACGACTTCTCATCATCTGTTCACCAACAGGCGAAGACTGCTAAACCGCGT
CGATACATTCCTCAGACCTCTGAAAGGACATTAGATGCTCCAGATCTAGTGGATGACTAC
TATTTGAATTTGTTAGATTGGGGCAGCAGCAATGTTCTTTCTATTGCTCTAGGCAGCACT
GTATATCTGTGGGATGCATCTGATGGTGCCACTTCAGAATTGGTCACTGTTGACGAAGAG
CATGGTCCTGTTACAAGTGTTAAATGGGCTCCTGATGGTAGACATATTGCTCTTGGTTTG
AACAATTCCGATGTTCAGCTCTGGGATACAACGGCAAATCGGCTGCTGAGAACTATGAGA
GGTGGTCACAGATCCCGAGTTGGCGCTCTAGATTGGAACAATCACTTATTAACAACTGGG
GGCATGGATGGTCAGATCAGAAACAATGATGTGAGAGTGAGATCGCCAATTGTTGATACC
TACCAAGGACATAACCAAGAAGTTTGTGGTTTAAAATGGTCAGCCTCTGGTCAACAATTA
GCTAGTGGTGGAAATGATAATCTCCTCCATATATGGGACAGGTCAATGGCTTCTTCCAAC
ACATCAACAGAGTGGCTTCACAGGCTTGAAGATCATACAGCTGCCGTTAAGGCCCTTGCT
TGGTGTCCTTTCCAGGGTAACTTACTAGCCTCTGGTGGTGGTGGAGGTGACAGGTCCATT
AAGTTCTGGAACACCCATACTGGTGCTTGCTTGAACTCTATCGATACAGGCTCTCAGGTT
TGTGCCCTGCTATGGAACAAGAACGAACGTGAGCTCCTAAGTTCACATGGTTTCACAAAG
AATCAGCTCACTCTTTGGAAATACCCTTCCATGGTAAAGACAGCCGAGCTCACTGGTCAC
ACATCCAGAGTTCTTTTTATGGCACAGAGTCCAGATGGTTGCACGGTGGCATCTGCAGCT
GGGGATGAAACTCTTAGATTTTGGAATGTATTTGGTACTCCTGAAGTTGCAAAGCCTGCA
CCAAAGGCAAACACTGAGCCATTTGCTCACCTTAACCGTATTCGGTGA