Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g072760.3.1
CDS Infomation

Syntaxin family protein (AHRD V3.3 *** B9MU58_POPTR)
Sequence

ATGAGCTTTGAAGATCTTGAATCAGGAAGCTCATTGTATGTTCAAGGAGGAAGTAGATCA
TGGGAACGACAAACGACACAAGCCATCACAAATCCATCTGCTTCTGATAATCGTCAATCC
ATAGTAGTTGGTGTGTTTCAAATAAACACAGCTTTGACAAACTTTCAACGCCTAGTTAAC
ACCCTTGGAACACCCAAAGACACTCTTCAACTCCGTCACAAGCTCCACAGTACAAGACAG
CAAATTGCAGAATTGATAAAAGAAACTTCGGCTAACCTAAAGCAAGCCATTGGATCAAAT
CGACATTCTCAATCTAGTGTCACCAAGAAGATCGCCAATGCTAAGCTTGCTAAGGATTTC
CAATCTGTTCTTAAAAAGTTCCAAAGAGCTCAGCAACTTGCAGCACAGAGAGAGGCAGCT
TTCACTCCTTCCATTTCCCAGGAGATCAATTCATCCAGAAGCATAGAGATTCAGATAAGT
TCATCTATCAGTCCCGAGAGCAGTTCTATCCTTCTGGAATCCAAAAGTTCTTTTGCTCAT
GGTGAACCCTGGCTTTACTTCTATGGCAGACAGGACGTCGTACAATTGGAACATGAGATT
GTTTTTAACAAAGCCATCATAGAAGAAAGAGAGCAAGGAATGATAGAAATCCAGCAACAG
ATTGGTGAACTGAATGAGATGTTCAAGGATTTAGCTCTATTGGTCCATGAACAAGGAACT
ATGCTCGATGATATAAGTTCTAATATTGGGAGTTCTCATGATGCAACTGCACAAGCTGCA
AAGCAACTTACCAAAGCATCGAAAATCCAACAATGTAATTCATCTACGCTGCTTGTTGTT
GGTGATATTTGGGGTCATCCTGCTAATAATAATTGTACTGGTGCTAGCATAAAGAGTTCT
CTTCCAAGTTACTAA

Peptide Sequence

PEP ID

Solyc06g072760.3.1
PEP Infomation

Syntaxin family protein (AHRD V3.3 *** B9MU58_POPTR)
Sequence

MSFEDLESGSSLYVQGGSRSWERQTTQAITNPSASDNRQSIVVGVFQINTALTNFQRLVN
TLGTPKDTLQLRHKLHSTRQQIAELIKETSANLKQAIGSNRHSQSSVTKKIANAKLAKDF
QSVLKKFQRAQQLAAQREAAFTPSISQEINSSRSIEIQISSSISPESSSILLESKSSFAH
GEPWLYFYGRQDVVQLEHEIVFNKAIIEEREQGMIEIQQQIGELNEMFKDLALLVHEQGT
MLDDISSNIGSSHDATAQAAKQLTKASKIQQCNSSTLLVVGDIWGHPANNNCTGASIKSS
LPSY*

Transcript Sequence

Transcript ID

Solyc06g072760.3.1
Transcript Infomation

Syntaxin family protein (AHRD V3.3 *** B9MU58_POPTR)
Sequence

CGGTTCATTCTTTACCGTAAGCTCCTTGTATTAATATGAAATCAGGAATGAAACTTTATC
TCCCTCACCCCCCTGTTGGCAAAAATGCTAACATGAACAACCAAAGTTATGTGATGACTC
TCAACTGAATCTAGCTTATATGGGACCACTTTGGAACTTCTGTTGTTCCTACAGAAAAGA
AAAGGCTCCGAGTGAATAAACCTAATTGAAAAGGAGATACCAACCAGCAGAGCTATGTGA
AGTATTTATCCAAGTAATGGATGGATTAGCTCTTAAATCTCCTCAGTTAACGGTCTCACA
AGCTTACAAGTGACAGTTTAACCAAGAGAAACAGTACAAACATGAAGCAAATTGTTGCCC
CTTAGCGCAGCTGATCCTTTGATGTTCCTTAACATAAACAGTATCCTTTTTTTCATAACC
TAGAAAACTTAGCAATCTCATAAATGTAAAAGAGACTCTGAATCTATCTCACATAGATGG
AATTATTCGGGACAACCACAAAAGCACAAAGCCACAAACTGTGAGCTAACCTACTTAATG
CTATTCTCAGAATTTTGCTATAGGGCGCTAGCTCGTATCATTTTTGATAAAGGATGCTTG
CTAACTTAACTAGCACAAAGGTCTTGCACCTTTCATAGAATTTCTGGTGTACACTCCGAG
ACATAACTATCATAAATTATTCTAAAAGACATTTAATGCCTCCAAAAGTAATACTTCATC
AACAAAGATAACAGTTTTTTCATCATTAAAAAAATCAAACTGGCAATTGTAGAAACTTAT
TAACTATCAAGATCAAGGGGAAGTTTACATACTGAAAGAAGAACTGCGGTCTCTGCACTC
TGAGGATCCTTGAATGTTACATAAGCAACTTGTGATCGCTCACTCTCACTATAAAAAAAA
AACAAAAAAAAACATGTAAGGTAATAAAAGTAACCATCAATCATCCTCAATAGGCACATA
CACCCTGTTTTATGACCATATAAAATGTTGTGTAAAGATAAGTTAGATGCTGAAAAATCC
AAAAATACTAATTATAAACTAACCCTTTCATCTCTAAATATTCAATATCCCCAGAGAAGG
AGAAGAACTCCTTGATATCTTGCTCTTTAGCACCCAAAGAAACATTGTTCACTTGCACTG
TTTTAACCTATCATTATAATAAAACAACCAAAAAAATATCAGCAAGACTTTACAACAAAA
GGCTTAATAGGTGAAAATCTCATTTACGGTTACGTAATGATAGTAACAATGACTTTATCT
ATTAAATTTTTCCACTATTTAAAAAAAAAAACAATCTTTCTCATTCTAAATAAACGAAAT
ATTATTATCACCTGATGGATATAATGCCATAAGATTAAAAGTTGTACCTTTCCTATATAC
TAGTTACAAAAAGGATATAAATAAGAATTATTCTATATTAGTTTAGACTCCATTTGTTTA
TGTATTTGATATATATATACAAATGAAATTGAATCTCACAGAACAATAATTCAAAAATGA
TTTATTTCGTCTATTCCATGATCAAACAGGGGAGAATACAGATTATCATCAGCTAATTTG
CATTTGTTTGTACCAACAAATTAAAAGAAATAGAGATGTTGAGCTATGCACTTACCGACA
TGGATCGAGATTAAAAAAAGATAGCAGATCAATCTGAGAAGAATTTGGAGAATATCGAAA
GAAGAGAAAAAAAAACAAAATTGGATGAAGAATCCAAAATAGAGATGTAAAAAAAAATAG
TAATATTATTATTATGGAGTTAGAAATAGAGCGTGTTATACGCAAAAGTTGGCAAATGTA
CTCGCTATTTACCTTTACCAGGTGTTTCCAATAAGGCCACACGAATTTAAGTACAAAATA
AATTAATTTATCTTCATTTATAATTTATAAAGAATAGAAAGTGTCTACACAAGTTACTTA
TAAATTGGTAATTTCACTTATATAATATTATTTTCTTTAATCTTTAACAAATAAGGTTAA
TTTCATTAGTTTAGCATATAAATAAATTTTTATCATGATTATAAATAATTACTTATTGAT
TGCAAGCTTCTCCAAAAGAGTTGCAGGAGACCTCCACAATTCACTACACAAATGCCAATA
TTTTCAACCTTTGCATGTAATATGGTTTCTTAAGCTTTGTCGATTCTGACTTACAATTTT
TTGGTACACATTATTGGAATACCAAGTTTAAATAAGTATATTTTTGGTACTTGGATAACA
CCTGGAAGAGGTAATATTAGTAAATGATAAAACTGAAGACAAAACTCAACAGCAAAACAG
AAATAGCAGAGGCGTTAAAGCTAATGCACCTTCTTCCTTTCGTCGTTTTGTACTCTCTAG
TATTAAATATTTTTACTTGCACGGCACATTGCCCAATGCCCACTTCTCCTGCTTTTTTCT
TGCAATTCGAAAGCAACCTCCTCCTTGTAGACGCAGATTTCTGATTCATTTACAGCACAC
CAACAAAAAGAAAAACTACTCTCATTTTTGTGTGTTTTCAAAATGAGCTTTGAAGATCTT
GAATCAGGAAGCTCATTGTATGTTCAAGGAGGAAGTAGATCATGGGAACGACAAACGACA
CAAGCCATCACAAATCCATCTGCTTCTGATAATCGTCAATCCATAGTAGTTGGTGTGTTT
CAAATAAACACAGCTTTGACAAACTTTCAACGCCTAGTTAACACCCTTGGAACACCCAAA
GACACTCTTCAACTCCGTCACAAGCTCCACAGTACAAGACAGCAAATTGCAGAATTGATA
AAAGAAACTTCGGCTAACCTAAAGCAAGCCATTGGATCAAATCGACATTCTCAATCTAGT
GTCACCAAGAAGATCGCCAATGCTAAGCTTGCTAAGGATTTCCAATCTGTTCTTAAAAAG
TTCCAAAGAGCTCAGCAACTTGCAGCACAGAGAGAGGCAGCTTTCACTCCTTCCATTTCC
CAGGAGATCAATTCATCCAGAAGCATAGAGATTCAGATAAGTTCATCTATCAGTCCCGAG
AGCAGTTCTATCCTTCTGGAATCCAAAAGTTCTTTTGCTCATGGTGAACCCTGGCTTTAC
TTCTATGGCAGACAGGACGTCGTACAATTGGAACATGAGATTGTTTTTAACAAAGCCATC
ATAGAAGAAAGAGAGCAAGGAATGATAGAAATCCAGCAACAGATTGGTGAACTGAATGAG
ATGTTCAAGGATTTAGCTCTATTGGTCCATGAACAAGGAACTATGCTCGATGATATAAGT
TCTAATATTGGGAGTTCTCATGATGCAACTGCACAAGCTGCAAAGCAACTTACCAAAGCA
TCGAAAATCCAACAATGTAATTCATCTACGCTGCTTGTTGTTGGTGATATTTGGGGTCAT
CCTGCTAATAATAATTGTACTGGTGCTAGCATAAAGAGTTCTCTTCCAAGTTACTAAATT
GAGATGTTGTAGTTTTTTCATCTCTCAAGTGTATGGGTTCGATTGTTCTACCTGCATCAG
TCTGCTAATGTAGATAATTTGTATGTCAGTATGATCTTCAAGGTACAGATGTACAGTATT
CGAATTATAGACATTGGGAACTATTTGCGTTCAGTGTGCTACCACATTGTGA