Gene sequences

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SNP Detection
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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g072660.3.1
CDS Infomation	Protein DEK (AHRD V3.3 *** A0A0B2QBX5_GLYSO)
Sequence	ATGTTTATCTCTACCCTAGACCACACCACTCTTTATTCAACTGTATTCATTCTCAAAAAA ATTCTCTCTTCAAAGCACAAACAAAACCTACTGAAAACTTCCATGGCGGCCGACAAAGAA ACACTAGAAGAGAAGAAGCAAGAGAAGGAAACAATCGAGAAAGAGGCGAAGGCGAAGAGG AGTAGCGAAGAGGAAAATGAAGGCGCAGAAGAAATGGATGTAGACAAAGAAGATGAGAAG GCGAAGGAAAAAGTTGTGAAGAAGGTAGAAGATGAGGGTGTAGAGAAAGAGGAGGAAGCG AAAAGTGATGATGCGATTTCGCCCAAAACACCAGGTTCCAGACCGACGAGGGAAAGGAAA ACAGTGGAGAGGTATTTTGAGTCTCTGGTTTATAGAGGATCTGCAACCAAACCCTTGTCC ATTGAGAAGGGTCAAGGTACACAGCTGAAGGACATCCCAAATGTGGCATATATGTTGTCC AAGAGAAAACTGGATGACAACCTGCACACGCTGCATAGCATTCTTTTTGGCAAGAAGTCA AAGGCACATAATTTGAAGAAAAACATAGGGCTGTTTTCTGGATATGTTTGGGTTGAAAAT GAGGAAAAACAGCGGGCAAAAATCAAAGAGAAGCTTGACAAGTGTGTCAAAGAAAAGCTA CTGGTTTTTTGTGATATACTCAATATCCCAGTTAGTAAATCTGCAACAAAGAAGGATGAG CTCTCTGTGAAGTTGTTAGACTTCCTGGAATCTCCTCACAGTACGACTGATTCTTTGCTT GCAGAGAAGGAACTGAGGAGGAAGAAGCGAAAATCAAAGGGCAAAACTTCCAAAAGCACA GGTTCCTTGGACAAAGCTGCAGGAAAGTCGGAAAAGAAGCATCAGAAACCAAAAATAGAG GAAGATGAAAGTGATGATGAGCCATCAAGTAATGAATCTGGTGATGACAATGATGGTGAG GAAGCCGATGAAGTAGGAAGTGATCATGAAGAGAGTGGTTCAGAAAAAGAGGAAGAAAAA AACGAAGAGCAAGAGGAAGAGAAACCAAAGAAAAAGAAGTCCAATGGGAATGTTTCTTCA AAGAAGGATTCTGGAAACAAAGTAACAGAAAAGCCCAAGGCTGTGAAAAAGGATAACTCT GCTAAATCCCCTAAAAGCATGACTAAATCTACCAAAGTGTCTTCAAGTACAGCTTCCAAA AGAGGTGCTTCTGGTGCTGATTCACTAGTTACACCTAAGAAACAAAAAGTTGAAAAAAAC AGTCAAAAGGAAGAAAATGAGTCAGTGAAGGAAAATGCTTCAAACAAGAAAAAATCAACC AAGACTCCTGCTAAGGTTTCTGAGAAGGATGGAAAAGAAAAAAGTGGCAAAAAGGCCAAG GCAGAGCCCAAAAAGGAAGAAATTCATGCAGCAGTTGTGAATATTTTGAAAGAAGTGGAT TTTAACTCTGCAACTTTGTCTGATATCATCCGAAATTTAGGTAGCCATTTTGGTGTAGAT TTGATGCATAGGAAAATAGAGGTGAAGGCTATCATCACTGATGTAATAAATAACATGAGT GATGACGAAGAAGGTGATGACTCTGAGGCTGAGAATGATGAAGAAAAAAATGAAGGGGAT GACCCTAAGGCTGAGAATGATGAAGAGAAAAATGAAGGTGATGATAGTGATGCTTAA

Peptide Sequence

PEP ID	Solyc06g072660.3.1
PEP Infomation	Protein DEK (AHRD V3.3 *** A0A0B2QBX5_GLYSO)
Sequence	MFISTLDHTTLYSTVFILKKILSSKHKQNLLKTSMAADKETLEEKKQEKETIEKEAKAKR SSEEENEGAEEMDVDKEDEKAKEKVVKKVEDEGVEKEEEAKSDDAISPKTPGSRPTRERK TVERYFESLVYRGSATKPLSIEKGQGTQLKDIPNVAYMLSKRKLDDNLHTLHSILFGKKS KAHNLKKNIGLFSGYVWVENEEKQRAKIKEKLDKCVKEKLLVFCDILNIPVSKSATKKDE LSVKLLDFLESPHSTTDSLLAEKELRRKKRKSKGKTSKSTGSLDKAAGKSEKKHQKPKIE EDESDDEPSSNESGDDNDGEEADEVGSDHEESGSEKEEEKNEEQEEEKPKKKKSNGNVSS KKDSGNKVTEKPKAVKKDNSAKSPKSMTKSTKVSSSTASKRGASGADSLVTPKKQKVEKN SQKEENESVKENASNKKKSTKTPAKVSEKDGKEKSGKKAKAEPKKEEIHAAVVNILKEVD FNSATLSDIIRNLGSHFGVDLMHRKIEVKAIITDVINNMSDDEEGDDSEAENDEEKNEGD DPKAENDEEKNEGDDSDA*

Transcript Sequence

Transcript ID	Solyc06g072660.3.1
Transcript Infomation	Protein DEK (AHRD V3.3 *** A0A0B2QBX5_GLYSO)
Sequence	ATGTTTATCTCTACCCTAGACCACACCACTCTTTATTCAACTGTATTCATTCTCAAAAAA ATTCTCTCTTCAAAGCACAAACAAAACCTACTGAAAACTTCCATGGCGGCCGACAAAGAA ACACTAGAAGAGAAGAAGCAAGAGAAGGAAACAATCGAGAAAGAGGCGAAGGCGAAGAGG AGTAGCGAAGAGGAAAATGAAGGCGCAGAAGAAATGGATGTAGACAAAGAAGATGAGAAG GCGAAGGAAAAAGTTGTGAAGAAGGTAGAAGATGAGGGTGTAGAGAAAGAGGAGGAAGCG AAAAGTGATGATGCGATTTCGCCCAAAACACCAGGTTCCAGACCGACGAGGGAAAGGAAA ACAGTGGAGAGGTATTTTGAGTCTCTGGTTTATAGAGGATCTGCAACCAAACCCTTGTCC ATTGAGAAGGGTCAAGGTACACAGCTGAAGGACATCCCAAATGTGGCATATATGTTGTCC AAGAGAAAACTGGATGACAACCTGCACACGCTGCATAGCATTCTTTTTGGCAAGAAGTCA AAGGCACATAATTTGAAGAAAAACATAGGGCTGTTTTCTGGATATGTTTGGGTTGAAAAT GAGGAAAAACAGCGGGCAAAAATCAAAGAGAAGCTTGACAAGTGTGTCAAAGAAAAGCTA CTGGTTTTTTGTGATATACTCAATATCCCAGTTAGTAAATCTGCAACAAAGAAGGATGAG CTCTCTGTGAAGTTGTTAGACTTCCTGGAATCTCCTCACAGTACGACTGATTCTTTGCTT GCAGAGAAGGAACTGAGGAGGAAGAAGCGAAAATCAAAGGGCAAAACTTCCAAAAGCACA GGTTCCTTGGACAAAGCTGCAGGAAAGTCGGAAAAGAAGCATCAGAAACCAAAAATAGAG GAAGATGAAAGTGATGATGAGCCATCAAGTAATGAATCTGGTGATGACAATGATGGTGAG GAAGCCGATGAAGTAGGAAGTGATCATGAAGAGAGTGGTTCAGAAAAAGAGGAAGAAAAA AACGAAGAGCAAGAGGAAGAGAAACCAAAGAAAAAGAAGTCCAATGGGAATGTTTCTTCA AAGAAGGATTCTGGAAACAAAGTAACAGAAAAGCCCAAGGCTGTGAAAAAGGATAACTCT GCTAAATCCCCTAAAAGCATGACTAAATCTACCAAAGTGTCTTCAAGTACAGCTTCCAAA AGAGGTGCTTCTGGTGCTGATTCACTAGTTACACCTAAGAAACAAAAAGTTGAAAAAAAC AGTCAAAAGGAAGAAAATGAGTCAGTGAAGGAAAATGCTTCAAACAAGAAAAAATCAACC AAGACTCCTGCTAAGGTTTCTGAGAAGGATGGAAAAGAAAAAAGTGGCAAAAAGGCCAAG GCAGAGCCCAAAAAGGAAGAAATTCATGCAGCAGTTGTGAATATTTTGAAAGAAGTGGAT TTTAACTCTGCAACTTTGTCTGATATCATCCGAAATTTAGGTAGCCATTTTGGTGTAGAT TTGATGCATAGGAAAATAGAGGTGAAGGCTATCATCACTGATGTAATAAATAACATGAGT GATGACGAAGAAGGTGATGACTCTGAGGCTGAGAATGATGAAGAAAAAAATGAAGGGGAT GACCCTAAGGCTGAGAATGATGAAGAGAAAAATGAAGGTGATGATAGTGATGCTTAATTT ATGAGTCTAGCAGAAGGATAGGTTTAAGGTTTTATACATCTTGTTAGTAGTTCTTATTTA TATTAGCTGAATTAAGACGGTGACCCCGATGGGTTCGTATATAAGGCATTTTCTTTTGCC TTTGCTTGTTTTAGAGTTGGTCTTTGCATTTCTTTTATGGCAACAGTATACCATCTGATG CTGAATATCATAGTTATTAATTTGTATTTATGTTGCTGCATTTCTCTTTGCTTAGTATGT GAATCTGCACATGCTTTATGTTGATAATTTCAATTGCGGTAGAATTCCCTATTAATTTTT TTTCATTCTTGCAACTCAAACACTTGATATCTTTGATAAGTGTGTTGTAATCTTATCCAT CCATCACAAACCTTTACGGTCATAACTAGGCTAGATGAAGCACTAGCCCTATCTAGCTAT TAGAAAAAGATTACATAAGAACACAACATATTATTCACTGCAACTAATTGTAACCTACAA TTTTGTGCAATTTACTAGCACAACATACATATTTAAAAAGACATAATTAGAAGTTAGAAC TGTTGAGCTTGAGCATTCTTGGTGTAGTGAGAAGCCCATAAGAGCCATAACCCTTGCCCA TTTCTCCATGTCCCAAGACCCTAGCTGGACTAAATGGGCTACATGAAGCAAGCCCACACC CAGGTCCATTAATCTCTCTCTCACTATCCATCTGGCCCAATACTTTGTGAAAAAGATTAA CATCACAAGGTAGCAAAATAGGTCCTTGGCTACAATAACCATATTCCATTTCAGCATCTT CAAGCAACATCTTGAACAATGGATGGTTTGCATATTTGGCCTTGATTGTAAACTTCTCTT TCTCTGGCCCAACATATACACAAAAACAACCTTGCGGTGCTAGTACTACTGGACTCTTTG TTTTGCTACTACCATGCCATGATTTGCTCTTGGACAACATCATCGTTCGACTTCCTTTTT TCATCAATAAATATCCCTCCAACTTCTTGAGTATCGACGCGTTTGAATTCTTCTTCCCTT TAATCATTTCCATATCCATTCACTTTCTCAATAACTCAAATGAAAGGAGCAAACAAAAAA GAAACAAACAAAAAAGAAAAGTTTTTTGGTTTTAATTGTTTGGTATATGTACTTGTGGAT TTATCCTCTATCATAAGCTAAATTTAGCATAAACCTAGATTTTATTCTAGTTGGATTACT CATACTTTTGAGTATCCAAATTAGAGAAAAGAATTCTTGAGAACTTGTGGTGAGGAAGGC ATGAAAAGAAAAAGAAAAGAGAGTTGTGAGTTTAGGTTACTAAGAG