Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g072370.3.1
CDS Infomation

GAGA-binding transcriptional activator (AHRD V3.3 *** H1ZN93_SOLLC)
Sequence

ATGGATGGAAATGGCGGAATGCATATACGAAATTGGAGTTATTTTGAGCCAACACCAACG
GTTCCGAAGGGCCATTTGGGCCTGCAATTCGTGTCCTCGATGAATGAAAAGCCCCCTCAT
TTTCGCAACATTCATGATAATCACCAACAACAACAACAATCCCACCAACCTGACCATCCT
TCAGTTATGGCGTCGACTAATGGTGGTGCATTTCATCATCATCGGGTTTGTGGGCTCTCG
GAGTCTCCCATGCCCATGGAGTACATGAGGGATTCATGGGTTAATCAAAAAGACTATAGA
GAGAAGTATCTCAATGTGCTATCTTCTATGCAGATGCACCAGCAGCCAAACTTGGTGAAA
GTTGAAACTGCTCCTCTGGTGGAAGAGGTTTGCCAAGAAGGGGATAATATAGGTGGGCTT
GCTAAGAAGAGGGGAGCTGGTCAATCGCAAGAGCTGAAGTCCCCTAAACCTAAGAAGGCA
AAGAAAGCTACTAGGGCTCCTAAAGACGAGTCTACCTCATCTCCTCCACGGGCAAGAGCT
CCCAGGAAAAGTGCAGAAGTCGTCATTAATGGTATTAATATGGATATTTCAGTAATTCCA
ATACCAATCTGCTCATGCACTGGGGCTGCTCAGCAGTGTTATAGGTGGGGCTGTGGTGGG
TGGCAGTCAGCTTGCTGTACCACTAACTTGTCTTCCTATCCCTTGCCTATGAATGTAAAA
CGGCGTGGTTCAAGGATAGCAGGTCGGAAGATGAGCCTGGGAGCGTTTAAGAAGGTACTA
GAGAAACTGGCTTCAGAAGGATATAACTTTTCTAATCCAATTGATCTGAAGCCACATTGG
GCAAGGCATGGTACAAACAAGTTTGTCATTATCAGATAG

Peptide Sequence

PEP ID

Solyc06g072370.3.1
PEP Infomation

GAGA-binding transcriptional activator (AHRD V3.3 *** H1ZN93_SOLLC)
Sequence

MDGNGGMHIRNWSYFEPTPTVPKGHLGLQFVSSMNEKPPHFRNIHDNHQQQQQSHQPDHP
SVMASTNGGAFHHHRVCGLSESPMPMEYMRDSWVNQKDYREKYLNVLSSMQMHQQPNLVK
VETAPLVEEVCQEGDNIGGLAKKRGAGQSQELKSPKPKKAKKATRAPKDESTSSPPRARA
PRKSAEVVINGINMDISVIPIPICSCTGAAQQCYRWGCGGWQSACCTTNLSSYPLPMNVK
RRGSRIAGRKMSLGAFKKVLEKLASEGYNFSNPIDLKPHWARHGTNKFVIIR*

Transcript Sequence

Transcript ID

Solyc06g072370.3.1
Transcript Infomation

GAGA-binding transcriptional activator (AHRD V3.3 *** H1ZN93_SOLLC)
Sequence

ATTTATAGAAAAACAAAATTCTAGTAGGTAAATAATGGCGTCCCTTCCAAATTCCCATAG
AGGGGATTACAGTCCCAAACCCTAATCAGCCGACTTTTACCTCCGGCAGCCATGGATGGA
AATGGCGGAATGCATATACGAAATTGGAGTTATTTTGAGCCAACACCAACGGTTCCGAAG
GGCCATTTGGGCCTGCAATTCGTGTCCTCGATGAATGAAAAGCCCCCTCATTTTCGCAAC
ATTCATGATAATCACCAACAACAACAACAATCCCACCAACCTGACCATCCTTCAGTTATG
GCGTCGACTAATGGTGGTGCATTTCATCATCATCGGGTTTGTGGGCTCTCGGAGTCTCCC
ATGCCCATGGAGTACATGAGGGATTCATGGGTTAATCAAAAAGACTATAGAGAGAAGTAT
CTCAATGTGCTATCTTCTATGCAGATGCACCAGCAGCCAAACTTGGTGAAAGTTGAAACT
GCTCCTCTGGTGGAAGAGGTTTGCCAAGAAGGGGATAATATAGGTGGGCTTGCTAAGAAG
AGGGGAGCTGGTCAATCGCAAGAGCTGAAGTCCCCTAAACCTAAGAAGGCAAAGAAAGCT
ACTAGGGCTCCTAAAGACGAGTCTACCTCATCTCCTCCACGGGCAAGAGCTCCCAGGAAA
AGTGCAGAAGTCGTCATTAATGGTATTAATATGGATATTTCAGTAATTCCAATACCAATC
TGCTCATGCACTGGGGCTGCTCAGCAGTGTTATAGGTGGGGCTGTGGTGGGTGGCAGTCA
GCTTGCTGTACCACTAACTTGTCTTCCTATCCCTTGCCTATGAATGTAAAACGGCGTGGT
TCAAGGATAGCAGGTCGGAAGATGAGCCTGGGAGCGTTTAAGAAGGTACTAGAGAAACTG
GCTTCAGAAGGATATAACTTTTCTAATCCAATTGATCTGAAGCCACATTGGGCAAGGCAT
GGTACAAACAAGTTTGTCATTATCAGATAGATGTATGGTGGATATGCTAGCAGTTGTCCT
TAAAATAGGTATGATGCATTTCTGGTGTACATAGTTGACTATTGCTTGGACTGAGGCTTG
TCAGTTAGTTTCTAACCAGTGAAATTCAAGCATTGCAGCACTCCTTCAGATTTTGTCCTG
TGGGATTTTCTTTCAGTTTACCTTTGTAGTTCTCGCAGATAGCACGTAAACTTACGGTAG
TGGCAGATTATGAAAGTTGCAGAGGAGGTACATTTGTTATGCAATTAGTATTGATGATCT
ATGAATGGAAAATTTTGCATTCTTTTATTTGTTATTATCCAGATTCTGTCTTCCTATGAG
GGAATACCTTATATTTGATCAACCAAATGGCTAAGTCCTGCACTACTCTGGTTGAATGTA