Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc06g071900.3.1
CDS Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A118JW05_CYNCS)
Sequence	ATGAACTTCATATCCATTCTGTGGAAACAGAGGATCACTAGTGCAATTCATCAAACAATT GTTATATCTTTGTCCAAACAAACTATTCATTCATGTCAAGTTTATTGTTTGAAAACATCG GATGCAAATTTTACTTCAGAGAAGTCAGAATCAGAAAAGGAAGAAAGGTTGGTAGATCAG GGAATGGTGACAACAAGGAACAGCTTAAGTCAAAGAATTGAAAGTGTACCCATAGGAGAG TCCATTGGATCCACTTTCCAAAGCTGGATGGGTGATGGTTTACCTATTCATAGAGGTGAC ATTTTCCACACTATGAATCGTTTGCGCAAACTCAAATTGAACAAGCGTGCTCTTGAGGTG ATGGAATGGGTTATAAGGGAGAGACCATATAGACCAAAGGAACTAGATTACTCATATTTA GTAGAATTCACTTCTAAGCTTCATGGAATATCACAAGCTGAAAGTCTATTCTCCCGAATT CCGTCTGAGTTCCAAAATGAGTTGCTCTACAACAATCTTATACTTGGATGCTTGGACAGA GGACTGATCAGGCTTTCACTAGCATATATGAAGAAAATGAGAGAACTGGACCATCCCATA TCTTATTTGGTGTTCAATCATCTCATCATTCTTCATTCCTCCCCAAGCCGCAAGAAGTTC ATTCCTAAAATCTTGACGCAGATGAAAGCCGATAAGGTTACTCCACATGTTTCAACCTTC AATATTCTGCTCAAGATAGAAGCAAATCAACACAATATTGAAGGCCTGTTGAAAGTTTTT AGTGACATGAAGAGAGCAAAAGTTGAACCGAATGAGGTATCTTACTGTATATTGGCCAAT GCACATGCTGTGGCTAGATTGTATACAGTTTGTGAGACCTATACTGAAGCTATTGAGAAA TCTGCAACTGGACAAAACTGGTCTACATTGGACATTCTGGTCATACTCTATGGATATCTG GGAAAGCGGAATGATTTAGAGAGGACATGGGGTGTCATTCTGGAGCTTTCCCATGTTAGG TCTAAGAGTTATGTCCTGGCGATCGAAGCATTTGGTAGGATTGGAGATCTCTGTCGAGCT GAAGAGCTGTGGTCCGCAATGAAATCAAGGAATTCTTTGAAGTCAAATGAGCAGTTCAAT TCGCTGATAGCTGTATATTGTAGACATGGACATATTACCAAAGCCACTGCATTGTATAAG GAGATGGAGAAAAGTGGGTGCAAGCCAAATGCCATTACTTATCGGCATCTTGCTCTTGGT TGCTTGAGAGCGGGATTAATTAAGGAGGCCATCAAAACTCTTCAATTGGGGATGGATATG AAAACAAGCATAAAGGTGAAAAGATCAACTCCATGGTTGGAAACTACTCTTTCAATAATT GAAATATTTGCAGATAATGGTGATGTAGAGAATGCTGAAAAGTTGTTTGAAGAACTGAAG AAAGCGAATTATACTAGGTATACCTTTGTGTACAATGCGTTAATCAAGGCGTATGTTAAG GGGAAGGTATATGATCCAAATCTTCTTAAAAGAATGATTCTTGGAGGGGCTAGGCCAGAT TCTGAGTCCTATAGCCTTTTGAAAGTTATTGACCAACTTCGAACGTGA

Peptide Sequence

PEP ID	Solyc06g071900.3.1
PEP Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A118JW05_CYNCS)
Sequence	MNFISILWKQRITSAIHQTIVISLSKQTIHSCQVYCLKTSDANFTSEKSESEKEERLVDQ GMVTTRNSLSQRIESVPIGESIGSTFQSWMGDGLPIHRGDIFHTMNRLRKLKLNKRALEV MEWVIRERPYRPKELDYSYLVEFTSKLHGISQAESLFSRIPSEFQNELLYNNLILGCLDR GLIRLSLAYMKKMRELDHPISYLVFNHLIILHSSPSRKKFIPKILTQMKADKVTPHVSTF NILLKIEANQHNIEGLLKVFSDMKRAKVEPNEVSYCILANAHAVARLYTVCETYTEAIEK SATGQNWSTLDILVILYGYLGKRNDLERTWGVILELSHVRSKSYVLAIEAFGRIGDLCRA EELWSAMKSRNSLKSNEQFNSLIAVYCRHGHITKATALYKEMEKSGCKPNAITYRHLALG CLRAGLIKEAIKTLQLGMDMKTSIKVKRSTPWLETTLSIIEIFADNGDVENAEKLFEELK KANYTRYTFVYNALIKAYVKGKVYDPNLLKRMILGGARPDSESYSLLKVIDQLRT*

Transcript Sequence

Transcript ID	Solyc06g071900.3.1
Transcript Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A118JW05_CYNCS)
Sequence	TCTCCCCTAAATTACCGTTCCTCTTTTTTCCTTCTTTCTCCCCTAAACATAGCCGAATCC TCCACTTCTGTAGACCTTCTCCATATCTTTCCTCTGTGATTTCAGCGGCCAACTTTCCTG CTACGACCATCACTGTCAGCTATTGCCCCTGGGAACCATCAAGAAAGAAGCTATTTTTAG CAGGGGGTTCTCACTTTATGGTTAAAATCAAATGCCAATGTGATTGAAACGTAATGTTTG AAGTGGGATGGGATCTAGCAACTTCACCTCCTTGAAATTTAATAATCCTTTTTTTTGTTC GTTAATCAAGCTGTGGCAGGTTAACTCTTATGGTTTCCGTGGACTAGTGATGCTGAATAT ATAATTTCAGGGCAATTCTTTCCTTAAGCAGTCCTGATGAGTAAAGTTGGTTTTGTTTCT GATATCAACAATGAACTTCATATCCATTCTGTGGAAACAGAGGATCACTAGTGCAATTCA TCAAACAATTGTTATATCTTTGTCCAAACAAACTATTCATTCATGTCAAGTTTATTGTTT GAAAACATCGGATGCAAATTTTACTTCAGAGAAGTCAGAATCAGAAAAGGAAGAAAGGTT GGTAGATCAGGGAATGGTGACAACAAGGAACAGCTTAAGTCAAAGAATTGAAAGTGTACC CATAGGAGAGTCCATTGGATCCACTTTCCAAAGCTGGATGGGTGATGGTTTACCTATTCA TAGAGGTGACATTTTCCACACTATGAATCGTTTGCGCAAACTCAAATTGAACAAGCGTGC TCTTGAGGTGATGGAATGGGTTATAAGGGAGAGACCATATAGACCAAAGGAACTAGATTA CTCATATTTAGTAGAATTCACTTCTAAGCTTCATGGAATATCACAAGCTGAAAGTCTATT CTCCCGAATTCCGTCTGAGTTCCAAAATGAGTTGCTCTACAACAATCTTATACTTGGATG CTTGGACAGAGGACTGATCAGGCTTTCACTAGCATATATGAAGAAAATGAGAGAACTGGA CCATCCCATATCTTATTTGGTGTTCAATCATCTCATCATTCTTCATTCCTCCCCAAGCCG CAAGAAGTTCATTCCTAAAATCTTGACGCAGATGAAAGCCGATAAGGTTACTCCACATGT TTCAACCTTCAATATTCTGCTCAAGATAGAAGCAAATCAACACAATATTGAAGGCCTGTT GAAAGTTTTTAGTGACATGAAGAGAGCAAAAGTTGAACCGAATGAGGTATCTTACTGTAT ATTGGCCAATGCACATGCTGTGGCTAGATTGTATACAGTTTGTGAGACCTATACTGAAGC TATTGAGAAATCTGCAACTGGACAAAACTGGTCTACATTGGACATTCTGGTCATACTCTA TGGATATCTGGGAAAGCGGAATGATTTAGAGAGGACATGGGGTGTCATTCTGGAGCTTTC CCATGTTAGGTCTAAGAGTTATGTCCTGGCGATCGAAGCATTTGGTAGGATTGGAGATCT CTGTCGAGCTGAAGAGCTGTGGTCCGCAATGAAATCAAGGAATTCTTTGAAGTCAAATGA GCAGTTCAATTCGCTGATAGCTGTATATTGTAGACATGGACATATTACCAAAGCCACTGC ATTGTATAAGGAGATGGAGAAAAGTGGGTGCAAGCCAAATGCCATTACTTATCGGCATCT TGCTCTTGGTTGCTTGAGAGCGGGATTAATTAAGGAGGCCATCAAAACTCTTCAATTGGG GATGGATATGAAAACAAGCATAAAGGTGAAAAGATCAACTCCATGGTTGGAAACTACTCT TTCAATAATTGAAATATTTGCAGATAATGGTGATGTAGAGAATGCTGAAAAGTTGTTTGA AGAACTGAAGAAAGCGAATTATACTAGGTATACCTTTGTGTACAATGCGTTAATCAAGGC GTATGTTAAGGGGAAGGTATATGATCCAAATCTTCTTAAAAGAATGATTCTTGGAGGGGC TAGGCCAGATTCTGAGTCCTATAGCCTTTTGAAAGTTATTGACCAACTTCGAACGTGAAT ATATTAGAATTATGTTGTGTGATTTTGCACCCTACTTCAAATTACTCGGCTAAGAGTAGT CCTATTCTGCGGCTCTGCGAATTGCTGAAGATAGCTATACTTCAGTGTGCCTGTTCTGTC CGAGTCTTGGAAAGATGATGGCAGGTTAGACAAGTTACGCTATATAATGTAGATGTCTTG ATTTGCTAATTGGCATATACTTGTTCATTAAATCTGCTTGCCTTTATGGTCAACTTCAGC ATTGTAATATTTGAATGGTTCTTAGCAATTTGACATTGCTTTAGGGTTTCTTTTGAGAAT ATTATTATAAAGATGTATGTTTGAGATACACATCGAACTCTTGTTGCTTCAAAACTAGAT TTGCTTTTTTTTATTAGTTTATAATTTATAATATGCTTATCTGGTCTGGATGCAGTTTGT GCTTTGTTGTTTTCATCTTTGCAAGAAATTCTAGGTTGAGATGATGCCTTTGTTTCTGGA CTCTATACTTAGTGTTGCATTATTTACATGTGCCGATCCCACTTCTGTCTTAAACTTCAA TGTACTCTACATGTATGGAACTCAAAAAGGAAAAAATTCCTAGATCAGAAAAACAGTTTA TCTATATGTATGTGGACAAATGCACCTCTGCATATTTCATCTTATTTCATCACAATGCAC ATTGTATGGTTTCTCTTTCAATTTTGGAAATGTTTCTGGGAGCTCTTACCCTGATGGCAT TACCATTGCGTATGAAATGTAATTGAAATAGAACGTGATTTGAACTTGTATCAGCTATGT TGCACTTACGGTACTTGCTCATTGAGTTGCTGCGTAGATTTAAGGCATGCGATGATAACC AAAAAACATGTTTCATATTGCTGAAGAAGGTAATGCAGCACATAGCAGAATCAGATAAAA GTTTTTAACTTTACATAATGTTGTTTGTAGTTTGGCCAATGTATGGGGAAACGAAGAGAG CAGAATCAGGAATTGATGATCAAAGATTAGAAATATCTGCAACAGAGTATCAGCAGGAAC AAAGAGGAGTTTTGTGAAGATTGCAGCTGATTGGGCCGAGGCCAAGGCCGAGGATGGATA GTTGTAAGCAGATGCTAAGCACCAAAGACACAAATGCTTGACCAAAGACCAGTTATTTTG TATCAACTACTGTCCGAGCTTTCCTAGATTCACTTGTGGAATTACACTAAGTATATCGTT GTTATACTATCCAAACTTCCTCATTTTCTTGGAATAAATTTCACTTTTCTGTTGGACTAT TTTGTCACATATACTTTATAAGGTTAATTATGACAGCATGTCCTTTTTCATCTTGATGAT GAATATTTCTCACCTTTCAACAACTATTCAAGAGATGGTCCGTGACTACTTTTATGTCCC CATGCACCGCACATTGTTCATATTTTCGGGTAGATAATGCAACGTAGATTTGAATTTTTC AATCCTCACACAATGCCTAAATTCAACAACTTTCACCTAACCATGTGGTCAGTGGCGGAG CCACGTGAGGGGTGTTCTGGTGC