Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g071790.3.1
CDS Infomation

Elongation factor Tu (AHRD V3.3 *** A0A0V0I976_SOLCH)
Sequence

ATGAGAGGCTCTCTTTCTCCCTACCAAAAAAAGATAACTTCATTATCCTCTCTTCCTTCT
ACCACAATTCATTTCACTCTCTTTCTCCAAAATCTTCAATCCTCAGCAAAAGCTTCTTCC
ATGGCTTCAATTTCAGCAGCTTCTGCAACTGCTGCTGCTGCTGCTTCTACAAAGATTAAT
ACCAGTGGTACTGTTCTTCCTTCAAAATCCTCTAAGCTTATCCTTTCATCTTCTTTTACA
CCAAACCCATCAACCCTTTTCCTCCATTCACCCGCCACTACTGCACCTTCTTCTTCTTCC
TCCCGCCACCGCCGGTTTACTGTCCGAGCTGCGCGTGGTAAATTCGAAAGGAAGAAACCC
CATGTCAATATTGGTACAATTGGCCATGTTGACCATGGGAAAACCACACTTACAGCTGCT
TTGACAATGGCGCTTGCTTCTCTGGGTAACTCCGCCCCGAAGAAGTATGATGAAATTGAT
GCTGCCCCTGAAGAAAGGGCTCGTGGTATTACGATTAATACTGCCACAGTGGAGTATGAA
ACTGAAAATCGGCATTACGCTCATGTGGATTGCCCTGGTCACGCTGATTATGTGAAGAAT
ATGATTACTGGTGCTGCTCAAATGGATGGAGCTATACTTGTTGTTTCAGGAGCTGATGGT
CCAATGCCGCAGACTAAGGAACATATTTTGCTTGCTAAGCAAGTGGGTGTCCCTAATATG
GTTGTTTTCTTGAACAAAGAGGACCAAGTTGATGATGAAGAGTTGCTTGAGCTTGTTGAG
CTGGAGGTAAGAGAGTTATTGTCAAGTTATGAGGGTGATGATCAATGGGTTGATAAGATT
TATAAATTGATGGACTCTGTTGATGAATATATTCCTATTCCACAAAGACAAACTGAATTA
CCTTTCTTGATGGCTATTGAAGATGTGTTTTCTATTACTGGTAGAGGTACAGTGGCTACA
GGGAGAGTGGAAAGAGGGACTGTTAAGACAGGGGAAATTGTTGATATAGTTGGATTGAAG
GACACTAGGAACACTACAGTAACAGGAGTTGAGATGTTTCAGAAGATATTGGATGAAGCA
ATGGCAGGAGATAATGTGGGGTTGTTGTTGAGAGGTATTCAAAAGATCGATATTCAAAGA
GGAATGGTGTTGGCAAAACCTGGATCAATTACTCCACACACCAAGTTTGAAGCTTTGGTG
TATGTGTTGAAGAAGGAAGAGGGTGGCAGGCATTCCCCTTTCTTTGCTGGTTATAGGCCA
CAGTTTTACATGAGAACAACTGATGTGACCGGAAAGGTTACTGCTATTATGACTGACAAG
GGAGAAGAATCTAAGATGGTCATGCCTGGTGATCGCGTAAACATGGTGGTCGAGCTCATT
ATGCCAGTGGCTTGTGAGCAGGGTATGAGGTTCGCTATTAGGGAAGGAGGAAAGACTGTC
GGAGCTGGTGTTATTCAGAAAATCTTAGAATGA

Peptide Sequence

PEP ID

Solyc06g071790.3.1
PEP Infomation

Elongation factor Tu (AHRD V3.3 *** A0A0V0I976_SOLCH)
Sequence

MRGSLSPYQKKITSLSSLPSTTIHFTLFLQNLQSSAKASSMASISAASATAAAAASTKIN
TSGTVLPSKSSKLILSSSFTPNPSTLFLHSPATTAPSSSSSRHRRFTVRAARGKFERKKP
HVNIGTIGHVDHGKTTLTAALTMALASLGNSAPKKYDEIDAAPEERARGITINTATVEYE
TENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNM
VVFLNKEDQVDDEELLELVELEVRELLSSYEGDDQWVDKIYKLMDSVDEYIPIPQRQTEL
PFLMAIEDVFSITGRGTVATGRVERGTVKTGEIVDIVGLKDTRNTTVTGVEMFQKILDEA
MAGDNVGLLLRGIQKIDIQRGMVLAKPGSITPHTKFEALVYVLKKEEGGRHSPFFAGYRP
QFYMRTTDVTGKVTAIMTDKGEESKMVMPGDRVNMVVELIMPVACEQGMRFAIREGGKTV
GAGVIQKILE*

Transcript Sequence

Transcript ID

Solyc06g071790.3.1
Transcript Infomation

Elongation factor Tu (AHRD V3.3 *** A0A0V0I976_SOLCH)
Sequence

ATGAGAGGCTCTCTTTCTCCCTACCAAAAAAAGATAACTTCATTATCCTCTCTTCCTTCT
ACCACAATTCATTTCACTCTCTTTCTCCAAAATCTTCAATCCTCAGCAAAAGCTTCTTCC
ATGGCTTCAATTTCAGCAGCTTCTGCAACTGCTGCTGCTGCTGCTTCTACAAAGATTAAT
ACCAGTGGTACTGTTCTTCCTTCAAAATCCTCTAAGCTTATCCTTTCATCTTCTTTTACA
CCAAACCCATCAACCCTTTTCCTCCATTCACCCGCCACTACTGCACCTTCTTCTTCTTCC
TCCCGCCACCGCCGGTTTACTGTCCGAGCTGCGCGTGGTAAATTCGAAAGGAAGAAACCC
CATGTCAATATTGGTACAATTGGCCATGTTGACCATGGGAAAACCACACTTACAGCTGCT
TTGACAATGGCGCTTGCTTCTCTGGGTAACTCCGCCCCGAAGAAGTATGATGAAATTGAT
GCTGCCCCTGAAGAAAGGGCTCGTGGTATTACGATTAATACTGCCACAGTGGAGTATGAA
ACTGAAAATCGGCATTACGCTCATGTGGATTGCCCTGGTCACGCTGATTATGTGAAGAAT
ATGATTACTGGTGCTGCTCAAATGGATGGAGCTATACTTGTTGTTTCAGGAGCTGATGGT
CCAATGCCGCAGACTAAGGAACATATTTTGCTTGCTAAGCAAGTGGGTGTCCCTAATATG
GTTGTTTTCTTGAACAAAGAGGACCAAGTTGATGATGAAGAGTTGCTTGAGCTTGTTGAG
CTGGAGGTAAGAGAGTTATTGTCAAGTTATGAGGGTGATGATCAATGGGTTGATAAGATT
TATAAATTGATGGACTCTGTTGATGAATATATTCCTATTCCACAAAGACAAACTGAATTA
CCTTTCTTGATGGCTATTGAAGATGTGTTTTCTATTACTGGTAGAGGTACAGTGGCTACA
GGGAGAGTGGAAAGAGGGACTGTTAAGACAGGGGAAATTGTTGATATAGTTGGATTGAAG
GACACTAGGAACACTACAGTAACAGGAGTTGAGATGTTTCAGAAGATATTGGATGAAGCA
ATGGCAGGAGATAATGTGGGGTTGTTGTTGAGAGGTATTCAAAAGATCGATATTCAAAGA
GGAATGGTGTTGGCAAAACCTGGATCAATTACTCCACACACCAAGTTTGAAGCTTTGGTG
TATGTGTTGAAGAAGGAAGAGGGTGGCAGGCATTCCCCTTTCTTTGCTGGTTATAGGCCA
CAGTTTTACATGAGAACAACTGATGTGACCGGAAAGGTTACTGCTATTATGACTGACAAG
GGAGAAGAATCTAAGATGGTCATGCCTGGTGATCGCGTAAACATGGTGGTCGAGCTCATT
ATGCCAGTGGCTTGTGAGCAGGGTATGAGGTTCGCTATTAGGGAAGGAGGAAAGACTGTC
GGAGCTGGTGTTATTCAGAAAATCTTAGAATGATGAACTTGCAGCTGAGCATCCCTTTTC
ACATATGGTCGGATTTTTCCATTGAAGTTTATTAATCCATTGTCATATATGCGACTTTTT
GGTTACTTTTGTTATGTCTTAGAATCTTACTTTAGTTGAAGTATCCTGTTTTATCGCCCA
ATTCTACTGAACTTTTGATAATTTTTCCCGTCTCTTGTTTCACTTATCATTTGCTTGAAA
GAAATGATATCATTTGCTCTCATGCACTTTATTTTCCTCTAGAT