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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g071590.3.1
CDS Infomation

carboxyl-terminal peptidase (DUF239) (AHRD V3.3 *** AT5G18460.1)
Sequence

ATGATTAGTAGTAGTAATTCTAAGTCATTTTCAATCATTTTTTCATTTGTTGGTTTCTTG
TTTCTTGCTTCTACATTTGCTACTGTCATCTCAGATCCAACTGTACAACATTCAAACCAA
ACTTTTAAACCAAAGCAAGAGTTGATCAAACTCAAGAGATTAAGGACTTATCTCAAGAAC
ATCAATAAGCCAGCAGTTAAGACAATTCAGAGTTCAGATGGAGATCTAATAGATTGTGTA
TTATCTCATCTTCAACCAGCTTTTGATCATCCTCAACTCAAAGGAATGAAGCCATTGGAA
CCTCCAACTAGGCCTAAATCGAATGAATCAACAGAAATTAGGAGCTATCAGTTGTGGAGA
GTTTCAGGAGAATCGTGCCCCGAAGGGACAGTTCCAATAAGAAGAACTACAGAGAAAGAT
GTTATGAGAGCTAGTACTTTACAAAGATTTGGAAAAAAAATTATAAGAGGCGTAAGGCGC
GACACAATGAGCAATGATCATGAGCATGCAATAGCATTTGTGAATGGTGAAGAATATTAT
GGTGCAAAGGCTAGTATTAGTGTATGGACACCAAAAGTAACAGACCAATATGAATTCAGT
TTGTCACAACTATGGATCATTTCTGGTACTTTTGGTGATGATCTTAATACCATTGAAGCT
GGCTGGCAGGTTAGTCCAGAACTATATGGAGATATCTATCCTAGGTTCTTCACATATTGG
ACGAGTGATGCATACCAAACCACTGGATGCTACAATTTACTCTGTTCAGGTTTTGTGCAA
ACAAATAGCAAGATTGCTATGGGGGCTGCAATATCTCCAACATCATCAACTGATGGTAGT
CAATTGGATATTGGCATAATGATATGGAAGGACCCAAAGCATGGAAATTGGTGGCTAGAA
TTGGGGTCAGGGCAATTAGTAGGGTATTGGCCATCAGTTTTGTTCAGCCATTTGCAAGAA
CATGCAAGCATGATACAATTTGGAGGAGAAATAGTGAACTCAAGATCATCAATACAAGGA
TTACACACATTAACACAAATGGGAAGTGGTCATTTTGCAGATGAAGGCTATGGCAAGGCA
TCTTATTTTAGAAATTTGCAAGTTGTTGATTGGGACAATAATTTGGTCCCATTATCAAAT
CTTCATCTTTTAGCTGATCACCCAAATTGCTATGACATTAAAGCTGCAAAAAATAATGTT
TGGGGTGATTATTTTTACTATGGTGGTCCTGGTAGGAATTCAAATTGTCCATAA

Peptide Sequence

PEP ID

Solyc06g071590.3.1
PEP Infomation

carboxyl-terminal peptidase (DUF239) (AHRD V3.3 *** AT5G18460.1)
Sequence

MISSSNSKSFSIIFSFVGFLFLASTFATVISDPTVQHSNQTFKPKQELIKLKRLRTYLKN
INKPAVKTIQSSDGDLIDCVLSHLQPAFDHPQLKGMKPLEPPTRPKSNESTEIRSYQLWR
VSGESCPEGTVPIRRTTEKDVMRASTLQRFGKKIIRGVRRDTMSNDHEHAIAFVNGEEYY
GAKASISVWTPKVTDQYEFSLSQLWIISGTFGDDLNTIEAGWQVSPELYGDIYPRFFTYW
TSDAYQTTGCYNLLCSGFVQTNSKIAMGAAISPTSSTDGSQLDIGIMIWKDPKHGNWWLE
LGSGQLVGYWPSVLFSHLQEHASMIQFGGEIVNSRSSIQGLHTLTQMGSGHFADEGYGKA
SYFRNLQVVDWDNNLVPLSNLHLLADHPNCYDIKAAKNNVWGDYFYYGGPGRNSNCP*

Transcript Sequence

Transcript ID

Solyc06g071590.3.1
Transcript Infomation

carboxyl-terminal peptidase (DUF239) (AHRD V3.3 *** AT5G18460.1)
Sequence

TTGTGTTCCATGGACAAAAAATTGGAATAAATCCTCTTGGCTTCTTCTTGTCTTGCTGCT
CATTTCAAAACTAGACAACCACAAAGGGTCAATACAACAATCCAAAATTAATCATCATGA
TTAGTAGTAGTAATTCTAAGTCATTTTCAATCATTTTTTCATTTGTTGGTTTCTTGTTTC
TTGCTTCTACATTTGCTACTGTCATCTCAGATCCAACTGTACAACATTCAAACCAAACTT
TTAAACCAAAGCAAGAGTTGATCAAACTCAAGAGATTAAGGACTTATCTCAAGAACATCA
ATAAGCCAGCAGTTAAGACAATTCAGAGTTCAGATGGAGATCTAATAGATTGTGTATTAT
CTCATCTTCAACCAGCTTTTGATCATCCTCAACTCAAAGGAATGAAGCCATTGGAACCTC
CAACTAGGCCTAAATCGAATGAATCAACAGAAATTAGGAGCTATCAGTTGTGGAGAGTTT
CAGGAGAATCGTGCCCCGAAGGGACAGTTCCAATAAGAAGAACTACAGAGAAAGATGTTA
TGAGAGCTAGTACTTTACAAAGATTTGGAAAAAAAATTATAAGAGGCGTAAGGCGCGACA
CAATGAGCAATGATCATGAGCATGCAATAGCATTTGTGAATGGTGAAGAATATTATGGTG
CAAAGGCTAGTATTAGTGTATGGACACCAAAAGTAACAGACCAATATGAATTCAGTTTGT
CACAACTATGGATCATTTCTGGTACTTTTGGTGATGATCTTAATACCATTGAAGCTGGCT
GGCAGGTTAGTCCAGAACTATATGGAGATATCTATCCTAGGTTCTTCACATATTGGACGA
GTGATGCATACCAAACCACTGGATGCTACAATTTACTCTGTTCAGGTTTTGTGCAAACAA
ATAGCAAGATTGCTATGGGGGCTGCAATATCTCCAACATCATCAACTGATGGTAGTCAAT
TGGATATTGGCATAATGATATGGAAGGACCCAAAGCATGGAAATTGGTGGCTAGAATTGG
GGTCAGGGCAATTAGTAGGGTATTGGCCATCAGTTTTGTTCAGCCATTTGCAAGAACATG
CAAGCATGATACAATTTGGAGGAGAAATAGTGAACTCAAGATCATCAATACAAGGATTAC
ACACATTAACACAAATGGGAAGTGGTCATTTTGCAGATGAAGGCTATGGCAAGGCATCTT
ATTTTAGAAATTTGCAAGTTGTTGATTGGGACAATAATTTGGTCCCATTATCAAATCTTC
ATCTTTTAGCTGATCACCCAAATTGCTATGACATTAAAGCTGCAAAAAATAATGTTTGGG
GTGATTATTTTTACTATGGTGGTCCTGGTAGGAATTCAAATTGTCCATAAAGAAAATATC
ATCACAACATTTTCTTGATCTTGTAGAGTAGGTACATATCATGTATTTTTTCAATTGAAT
ATATTGTGTTTTGTCATATTTTATTACAGAATGAATTGGCATATATAGCAGCCATGTAAT
TTTTTGGTAGCAAGTTGATAATATACAAAATAAAATGGTTTCTTTAATGACGCCTGACAG
GTTAATTCGAGTTTGCCTAGGTTTTATCGCTTCAACCAATAAGATTAATTCTATATTAAA
TTGCACA