Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g071560.3.1
CDS Infomation

Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (AHRD V3.3 *** K4C8M8_SOLLC)
Sequence

ATGACTTTTGGGTCTGAATGGAAGTTCTCTCAAGTCTTTGGTGAACAAAATCCCCATGAG
GATGTACAAGATTGTGATATTATCTCTGCAATGGAGTTTGACAAGAATGGTGATAATCTG
GCTGTTGGAGATCAAGCTGGACGTGTCATGATTTTTGAGCGGCATGCTGGTAAAGAAGAT
CTCTTTGAGTGCAGTTCTCGAAGTGACTCTGGTCAGTTCAACCTTCCACAAAAGCAGCAT
CCTGAATTTGAGTATAAGACAGAATTCCAGAGTCATGAATCTGAGTTTGATTATTTGAAG
AGTGTGGAAATTGAAGAGAAGATTAATAAAATCAGATGGTGTACGAAACTCAACAGATCG
TTATTTCTTCTTACAGCAAACGACAGGACGATAAAACTTTGGAAGATCAAGGAACAGAAA
GTAAAGAAAGTTAAACAAATGGACATCAATTCATCTGTGACTTCAGAGAATTCTCTTTTA
GCTGATAGAAGTTACATGAGTGGACAAAGTGAATCATCTCATGTTAATGGTTACAGTCTA
GAATGGACTAACAAAATGAACGGCACATCATCATCACATCTTGCAGATATCATAAATGTA
GATTATACAAGATCCCGAAAAGTATATGCAAATGCTCATGATTTCAACATCAATTCCATC
TCAAACAATAGCGATGGTGAGACATTCCTCTCTGGGGATGACCTTAGGATAAACGTATGG
AACCTTGAGGTTAGAGATCAGTGTTTCAATATCATTGATATGAAGCCAAAAGATATGGAA
GATCTTACAGAGGTGATTACATCAGCAGAATTCCATCCATTTCACTGCAATTTGTTGGCT
TATAGTAGTTCGCGGGGATTCATACGTCTTGTTGACATGAGGATGTCTGCAATATGTGAT
CACAATGTGAAAATACTTCAAGATGGAAGGAGCCATGGCTCTAAAACATTTTTCAGTGAG
ATCATTGCTTCTATATCTGACATGAAGTATGCAATGGATGGAAGGCATATTTTAAGTCGG
GATTACATGACTCTGAAGCTATGGGACACTCACATGGAGTCTTCCCCGGTTGCAACATAT
AAGATTCATGAACACCTCCGTCCTAAGCTTCCTAAGTTGTATACAGATGATGCCATCTTC
GATAAGTTCGATTGCTGCCTGAATGGAAACGAACTTCAATTTGCAACTGGATCTTACAGC
AATCATCTTCGTGTATTTTCATTTGGAACTGGGAATGAAAATGGCATCACACTGGAAGTC
AAAAAAGAATCAAATAGAAAACCAACCTCTCAAACTACTTCAAGGCCTCGAAGGTCATCA
TTGAGCAACTTGGCACGAGGATTTTATCGCCAAGGACAAGATCATGACTCAGAAAATGAG
ATATCCTGTAACCTGAAGTCCAAGTTGCTGCATGTGGCTTGGCATCCAACGCACAATCTG
ATCGCTTGCTCCAGTGGAAGCAGCTTGTTCATGTACCATGCTTAA

Peptide Sequence

PEP ID

Solyc06g071560.3.1
PEP Infomation

Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (AHRD V3.3 *** K4C8M8_SOLLC)
Sequence

MTFGSEWKFSQVFGEQNPHEDVQDCDIISAMEFDKNGDNLAVGDQAGRVMIFERHAGKED
LFECSSRSDSGQFNLPQKQHPEFEYKTEFQSHESEFDYLKSVEIEEKINKIRWCTKLNRS
LFLLTANDRTIKLWKIKEQKVKKVKQMDINSSVTSENSLLADRSYMSGQSESSHVNGYSL
EWTNKMNGTSSSHLADIINVDYTRSRKVYANAHDFNINSISNNSDGETFLSGDDLRINVW
NLEVRDQCFNIIDMKPKDMEDLTEVITSAEFHPFHCNLLAYSSSRGFIRLVDMRMSAICD
HNVKILQDGRSHGSKTFFSEIIASISDMKYAMDGRHILSRDYMTLKLWDTHMESSPVATY
KIHEHLRPKLPKLYTDDAIFDKFDCCLNGNELQFATGSYSNHLRVFSFGTGNENGITLEV
KKESNRKPTSQTTSRPRRSSLSNLARGFYRQGQDHDSENEISCNLKSKLLHVAWHPTHNL
IACSSGSSLFMYHA*

Transcript Sequence

Transcript ID

Solyc06g071560.3.1
Transcript Infomation

Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (AHRD V3.3 *** K4C8M8_SOLLC)
Sequence

AAGAAAACACATTTATACAAGCTTCTTGTCTCCAAAATTCATATCTTTTAAGTGATAGAA
ATCATAAAGTTCTGAGAAAGTTCAAATCTTGGGAGTGTTGGTTTAATTTCTTGAGTGAGG
AGTTATGACTTTTGGGTCTGAATGGAAGTTCTCTCAAGTCTTTGGTGAACAAAATCCCCA
TGAGGATGTACAAGATTGTGATATTATCTCTGCAATGGAGTTTGACAAGAATGGTGATAA
TCTGGCTGTTGGAGATCAAGCTGGACGTGTCATGATTTTTGAGCGGCATGCTGGTAAAGA
AGATCTCTTTGAGTGCAGTTCTCGAAGTGACTCTGGTCAGTTCAACCTTCCACAAAAGCA
GCATCCTGAATTTGAGTATAAGACAGAATTCCAGAGTCATGAATCTGAGTTTGATTATTT
GAAGAGTGTGGAAATTGAAGAGAAGATTAATAAAATCAGATGGTGTACGAAACTCAACAG
ATCGTTATTTCTTCTTACAGCAAACGACAGGACGATAAAACTTTGGAAGATCAAGGAACA
GAAAGTAAAGAAAGTTAAACAAATGGACATCAATTCATCTGTGACTTCAGAGAATTCTCT
TTTAGCTGATAGAAGTTACATGAGTGGACAAAGTGAATCATCTCATGTTAATGGTTACAG
TCTAGAATGGACTAACAAAATGAACGGCACATCATCATCACATCTTGCAGATATCATAAA
TGTAGATTATACAAGATCCCGAAAAGTATATGCAAATGCTCATGATTTCAACATCAATTC
CATCTCAAACAATAGCGATGGTGAGACATTCCTCTCTGGGGATGACCTTAGGATAAACGT
ATGGAACCTTGAGGTTAGAGATCAGTGTTTCAATATCATTGATATGAAGCCAAAAGATAT
GGAAGATCTTACAGAGGTGATTACATCAGCAGAATTCCATCCATTTCACTGCAATTTGTT
GGCTTATAGTAGTTCGCGGGGATTCATACGTCTTGTTGACATGAGGATGTCTGCAATATG
TGATCACAATGTGAAAATACTTCAAGATGGAAGGAGCCATGGCTCTAAAACATTTTTCAG
TGAGATCATTGCTTCTATATCTGACATGAAGTATGCAATGGATGGAAGGCATATTTTAAG
TCGGGATTACATGACTCTGAAGCTATGGGACACTCACATGGAGTCTTCCCCGGTTGCAAC
ATATAAGATTCATGAACACCTCCGTCCTAAGCTTCCTAAGTTGTATACAGATGATGCCAT
CTTCGATAAGTTCGATTGCTGCCTGAATGGAAACGAACTTCAATTTGCAACTGGATCTTA
CAGCAATCATCTTCGTGTATTTTCATTTGGAACTGGGAATGAAAATGGCATCACACTGGA
AGTCAAAAAAGAATCAAATAGAAAACCAACCTCTCAAACTACTTCAAGGCCTCGAAGGTC
ATCATTGAGCAACTTGGCACGAGGATTTTATCGCCAAGGACAAGATCATGACTCAGAAAA
TGAGATATCCTGTAACCTGAAGTCCAAGTTGCTGCATGTGGCTTGGCATCCAACGCACAA
TCTGATCGCTTGCTCCAGTGGAAGCAGCTTGTTCATGTACCATGCTTAAAGTGCTATGAA
GAGGACTCATAGTCATAAGCTTCCTGTAAAAAAAATCATATTGTCCCTGTCAATATACCG
CGTTTGTGAGATTGGCTGGTCTAATCTCACCGTTAACAGTCTGCCATAGGAATATTTTTG
AAAAAAATTAACGATTCCTTTTTAAAAAATGGTATTGCTTTTACAAGATAGCATACACAG
AAGTTTGATACTTGCAAGTTGCACAAATACATTTTGTGCACATCTGAAGAAGTAAAGGTG
GCAAACATTTTTGGTTGATA