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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g071020.3.1
CDS Infomation

Pectate lyase (AHRD V3.3 *** K4C8H5_SOLLC)
Sequence

ATGGTAACTCTCATAAATAGGTCGAGTTTCTTTGTAATTTTGTGCACACTATTTTTTAGC
ATTGAGGCTAATATTGGAGAGTTTGATGAGGTGTGGAGGACTCGAGCCACCCAAGCAAAT
AAAAATGCTAAAGAATCCTATAATCCTAATCCTGAAAAAGTTGCAGCTAATTTCAACAAA
CATGTTCACAGGTCGGAAGAAGGTAGCAATAGCACAAGAAGGGACTTGCACAAGTACAAT
GGTCCATGCGTGGCTACAAACCCTATTGATCGTTGCTGGAGATGTGACCCACATTGGGCT
AAAAATCGCCAGAAGCTAGCAGATTGTGTTCTAGGATTTGGCCATCATACGACTGGTGGC
AAAGGTGGCAAAATCTACGAAGTAACTGACCCTGGGGACACCGATATGGTGAATCCTAAG
CAAGGGACACTGCGCCATGCAGTCATTCAGCCAGGGCCACTATGGATCATATTTGCACAT
CACATGGTCATTAAGCTAAACCAAGAACTTATTATGACAGGCGACAAGACAATTGATGCC
AGAGGACAACAAGTGCATATTACTGGTGGTGCTAGTTTGATGTTACAGTACATAAACAAT
GTGATTATTCATGGTCTTCATATCCATGATATAAAGGCTGGTAATGGTGGACTAATTAGA
GACTCGATCAATCATTACGGTTTTCGAACAAAAAGTGATGGTGATGGTATTTCAATCTAT
GGATCAACAAACATTTGGATTGATCATGTTTCCATGTCTAATTGTGACGATGGACTCATT
GATGCCGTGCAGGCTTCAACTGCTATTACCATTTCCAACTGCCATTTCACCCATCATAAT
GACGTTATGTTGTTTGGGGCAAGTGACAGCTTCAAACAGGACGAAATCCTACAAATAACA
CTTGCTTTTAATCACTTTGGCCAAGGGCTGATCCAGAGGATGCCAAGAGTGAGATGGGGA
TTTGTTCATGCTGTCAACAATGACTATACTCACTGGCTAATGTATGCCGTTGGTGGTAGT
CAACAACCTACCATCCTCAGCCAGGGCAATCGTTTCATCGCCCCGCCTAACCCTAATGCT
AAAGAGGTGACCAAAAGGGAATATTCACCTGAGAGTGTGTGGAAGAATTGGGTGTGGAGA
TCACAGGGAGATCTGATGATGAACGGAGCCTTCTTCGTGGAATCTGGAGATCCCAATCAT
AAATTCACGACGGGTCCTGATATGATCCACCCCAGGGCAGGATCAGACGCAGGCAGGCTA
ACAAGATTTTCAGGCTCTTTGAACTGCATTGAGGGGAAGCCTTGTTAG

Peptide Sequence

PEP ID

Solyc06g071020.3.1
PEP Infomation

Pectate lyase (AHRD V3.3 *** K4C8H5_SOLLC)
Sequence

MVTLINRSSFFVILCTLFFSIEANIGEFDEVWRTRATQANKNAKESYNPNPEKVAANFNK
HVHRSEEGSNSTRRDLHKYNGPCVATNPIDRCWRCDPHWAKNRQKLADCVLGFGHHTTGG
KGGKIYEVTDPGDTDMVNPKQGTLRHAVIQPGPLWIIFAHHMVIKLNQELIMTGDKTIDA
RGQQVHITGGASLMLQYINNVIIHGLHIHDIKAGNGGLIRDSINHYGFRTKSDGDGISIY
GSTNIWIDHVSMSNCDDGLIDAVQASTAITISNCHFTHHNDVMLFGASDSFKQDEILQIT
LAFNHFGQGLIQRMPRVRWGFVHAVNNDYTHWLMYAVGGSQQPTILSQGNRFIAPPNPNA
KEVTKREYSPESVWKNWVWRSQGDLMMNGAFFVESGDPNHKFTTGPDMIHPRAGSDAGRL
TRFSGSLNCIEGKPC*

Transcript Sequence

Transcript ID

Solyc06g071020.3.1
Transcript Infomation

Pectate lyase (AHRD V3.3 *** K4C8H5_SOLLC)
Sequence

ATGGTAACTCTCATAAATAGGTCGAGTTTCTTTGTAATTTTGTGCACACTATTTTTTAGC
ATTGAGGCTAATATTGGAGAGTTTGATGAGGTGTGGAGGACTCGAGCCACCCAAGCAAAT
AAAAATGCTAAAGAATCCTATAATCCTAATCCTGAAAAAGTTGCAGCTAATTTCAACAAA
CATGTTCACAGGTCGGAAGAAGGTAGCAATAGCACAAGAAGGGACTTGCACAAGTACAAT
GGTCCATGCGTGGCTACAAACCCTATTGATCGTTGCTGGAGATGTGACCCACATTGGGCT
AAAAATCGCCAGAAGCTAGCAGATTGTGTTCTAGGATTTGGCCATCATACGACTGGTGGC
AAAGGTGGCAAAATCTACGAAGTAACTGACCCTGGGGACACCGATATGGTGAATCCTAAG
CAAGGGACACTGCGCCATGCAGTCATTCAGCCAGGGCCACTATGGATCATATTTGCACAT
CACATGGTCATTAAGCTAAACCAAGAACTTATTATGACAGGCGACAAGACAATTGATGCC
AGAGGACAACAAGTGCATATTACTGGTGGTGCTAGTTTGATGTTACAGTACATAAACAAT
GTGATTATTCATGGTCTTCATATCCATGATATAAAGGCTGGTAATGGTGGACTAATTAGA
GACTCGATCAATCATTACGGTTTTCGAACAAAAAGTGATGGTGATGGTATTTCAATCTAT
GGATCAACAAACATTTGGATTGATCATGTTTCCATGTCTAATTGTGACGATGGACTCATT
GATGCCGTGCAGGCTTCAACTGCTATTACCATTTCCAACTGCCATTTCACCCATCATAAT
GACGTTATGTTGTTTGGGGCAAGTGACAGCTTCAAACAGGACGAAATCCTACAAATAACA
CTTGCTTTTAATCACTTTGGCCAAGGGCTGATCCAGAGGATGCCAAGAGTGAGATGGGGA
TTTGTTCATGCTGTCAACAATGACTATACTCACTGGCTAATGTATGCCGTTGGTGGTAGT
CAACAACCTACCATCCTCAGCCAGGGCAATCGTTTCATCGCCCCGCCTAACCCTAATGCT
AAAGAGGTGACCAAAAGGGAATATTCACCTGAGAGTGTGTGGAAGAATTGGGTGTGGAGA
TCACAGGGAGATCTGATGATGAACGGAGCCTTCTTCGTGGAATCTGGAGATCCCAATCAT
AAATTCACGACGGGTCCTGATATGATCCACCCCAGGGCAGGATCAGACGCAGGCAGGCTA
ACAAGATTTTCAGGCTCTTTGAACTGCATTGAGGGGAAGCCTTGTTAG