Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g070970.3.1
CDS Infomation

Serine/threonine-protein kinase atr (AHRD V3.3 *** A0A0B0N9L0_GOSAR)
Sequence

ATGGACGATTCCGCTAAAGATCAATCCTCCTCTGTTTCTGCAAAGGCTAAGCAATCATCA
TCATCAAAGCTTCTGCGGTATCCGTTGCGATCGACCTCTAAATCGAAGGAAGAGAAGTTG
CCTCTGACTGATTCCTCCAACTCTTCTGCTTCTGCGAGGGTAAGACCTGCATCAAGTGTC
AGTAAGAGTGTTGCTGCCCTTCCCCTCTCTGGGAAGGAAAAATCAGCGAAGCCTCCAAGA
CGGCTGTCTGTTCCCTCCAAGTCAATTGTCAGCCCTGCTTCTAGACCACTTGGTATTATA
ACCAAGGAACCAAAAAAAATAGGCAAACCCATTTCTGAGACTAGAGCAAAGAGATCTCCT
AGTAACCAAGGAAAATCGGATACACCACAATCAAATGTTTCAAAGTCCTCAAATAGAAAG
AAATATGACCTTATATCCTCAGCTTCTTATTGGCTATCACAGATTAAGCTTTCTGAATCT
GCTGCTAAGCATTCAATTTCCCTGGGCTTGTTCAAACTTGCTTTGGAGGCTGGCTCTGAG
CCTCTTCAGCGTCTGAGAGATGAGCTGAAATCTTATGTGCAACGAAATGCCCTTGTTGAA
CTTGAGGAGCCTGTGAAACAATTGTTTGATAGCTATAACATCCTCCAAATATCTGAGCAG
TTGCAAGTTTCTGAGACTTGTTCTCATGTGCCATCTGATAATGACGTTCATAGCTCTTCT
TCTGTTGCAAACACTGAGAGACTGCAAACCAAAGTCTTGAACAAAGACTCTACTAAAGCT
GCACAAGTGAAAGAACCAACCAAGCAGCAGCCTTCAAAGATTGGAAGCACTCCTAGGACC
CGGAATTCTGTAAACAAAATTGCTGCAGCTGCGAAATCTATATCACCAAAAACTGGAGGT
CGTACCACAAAAGAGAAACTTCAAAAGCCTGCTAAGCCAGAACCAAATAAGGCTAAGGTG
ATGAAAAGACAGGGAAAGAGATCTGCTCAAGGAGAAGGGCCTGTCGATGCCTGTATTTCA
GAGAAAGTCCTGGAAGAAGATAAGGAAAATCTGGATGCTCCACAAACAGAAGTGATTAGC
ACCTGA

Peptide Sequence

PEP ID

Solyc06g070970.3.1
PEP Infomation

Serine/threonine-protein kinase atr (AHRD V3.3 *** A0A0B0N9L0_GOSAR)
Sequence

MDDSAKDQSSSVSAKAKQSSSSKLLRYPLRSTSKSKEEKLPLTDSSNSSASARVRPASSV
SKSVAALPLSGKEKSAKPPRRLSVPSKSIVSPASRPLGIITKEPKKIGKPISETRAKRSP
SNQGKSDTPQSNVSKSSNRKKYDLISSASYWLSQIKLSESAAKHSISLGLFKLALEAGSE
PLQRLRDELKSYVQRNALVELEEPVKQLFDSYNILQISEQLQVSETCSHVPSDNDVHSSS
SVANTERLQTKVLNKDSTKAAQVKEPTKQQPSKIGSTPRTRNSVNKIAAAAKSISPKTGG
RTTKEKLQKPAKPEPNKAKVMKRQGKRSAQGEGPVDACISEKVLEEDKENLDAPQTEVIS
T*

Transcript Sequence

Transcript ID

Solyc06g070970.3.1
Transcript Infomation

Serine/threonine-protein kinase atr (AHRD V3.3 *** A0A0B0N9L0_GOSAR)
Sequence

ATAAAGCTAAGGAAGTATTACTTTTGTGAATTTTAACCAAAAGAGCGTCGAATTTGCCAA
CTCAGCCCGTCAGCAATGTACATCAACGGTAAGGAATTGTTCAAAATTTGAAAACCCAAA
TTGAAAGCCTATTATTGGACCCACAAAATGGGCCCAACCCAAAGAGCCGTTCCAATATTC
TCAGCTTTTCTTTTTTTCATTATTCCCCACTTTTTAATTTAATTTTGAAGCAATTCTTAC
ATTTCCCGCTCAGACGCTGAATATAAAGCAACAATTTCCTCATCATCCATCTTCACTTAC
CAAATTCTCTCGTCAATTGAAACCCTAGAATTCACCATGGACGATTCCGCTAAAGATCAA
TCCTCCTCTGTTTCTGCAAAGGCTAAGCAATCATCATCATCAAAGCTTCTGCGGTATCCG
TTGCGATCGACCTCTAAATCGAAGGAAGAGAAGTTGCCTCTGACTGATTCCTCCAACTCT
TCTGCTTCTGCGAGGGTAAGACCTGCATCAAGTGTCAGTAAGAGTGTTGCTGCCCTTCCC
CTCTCTGGGAAGGAAAAATCAGCGAAGCCTCCAAGACGGCTGTCTGTTCCCTCCAAGTCA
ATTGTCAGCCCTGCTTCTAGACCACTTGGTATTATAACCAAGGAACCAAAAAAAATAGGC
AAACCCATTTCTGAGACTAGAGCAAAGAGATCTCCTAGTAACCAAGGAAAATCGGATACA
CCACAATCAAATGTTTCAAAGTCCTCAAATAGAAAGAAATATGACCTTATATCCTCAGCT
TCTTATTGGCTATCACAGATTAAGCTTTCTGAATCTGCTGCTAAGCATTCAATTTCCCTG
GGCTTGTTCAAACTTGCTTTGGAGGCTGGCTCTGAGCCTCTTCAGCGTCTGAGAGATGAG
CTGAAATCTTATGTGCAACGAAATGCCCTTGTTGAACTTGAGGAGCCTGTGAAACAATTG
TTTGATAGCTATAACATCCTCCAAATATCTGAGCAGTTGCAAGTTTCTGAGACTTGTTCT
CATGTGCCATCTGATAATGACGTTCATAGCTCTTCTTCTGTTGCAAACACTGAGAGACTG
CAAACCAAAGTCTTGAACAAAGACTCTACTAAAGCTGCACAAGTGAAAGAACCAACCAAG
CAGCAGCCTTCAAAGATTGGAAGCACTCCTAGGACCCGGAATTCTGTAAACAAAATTGCT
GCAGCTGCGAAATCTATATCACCAAAAACTGGAGGTCGTACCACAAAAGAGAAACTTCAA
AAGCCTGCTAAGCCAGAACCAAATAAGGCTAAGGTGATGAAAAGACAGGGAAAGAGATCT
GCTCAAGGAGAAGGGCCTGTCGATGCCTGTATTTCAGAGAAAGTCCTGGAAGAAGATAAG
GAAAATCTGGATGCTCCACAAACAGAAGTGATTAGCACCTGAAGTTTTTGGCAGGAAGCT
TTTGAAATCATATCAGAGGCCAAGGTGGAAGTATTTGAATCTGGAGTGTGCATTCCAATT
TTGGATTTGGTTTGTTTCATTTGTTTATTCTTAATTTTTAAAAGAAAAATTACCGAACCA
TTATACAGTTGTGTCTAGCCTGTTCGTATTGGAATTCATGCAAGACGTACAGTGCGTTCT
TTTTTACTCAACAGCTTCTATGCGCTTGCAGTTGAATATTACTTGGAAGTAATTATACCT
GCAGTATATACAGTGTTATTTTTATCATTTGAATTAGCTTTTGATTTTAGATCTCAGTGA
CATCCTGGGCATCTTCGATTCCTTTAGTTCGAGTATTTTTCCTCCAAATTTTGTGTTTTT
CATCTTTGTAACAAATAGCATGAAATCAACGGTTGTTTGAATTTGATTGGTTCTTAATCC
TACTACCCAGCATCCTCAAGTGCGCTCTAGCAGTCCAGTGCGGTGCTATTGCATCTATAC
ATGCATATATCTTTTATGCTGCTATATATGACACTATATTAGTATATTACTACTTCTCTA
TCTGCTAGAAAGAAATATCAACTTAATGGACAAGTGAATTGTGATTCATCTCTACTATTG
TGAAATACAGACTGAAAAGGCCACTGTGACAATAATTATTTTGTTGTCATTTTTTCTTCT
TGCAACTTTCTCTGAAAATTTTTTTGCGAAGGTTTCTGATCAAACAAAATGAGAGTTCCA
TTCAAATAAAATTTCAAAGAGGAGGTTTCAATCCGTAAATATAACATAGCTGAGCCATGG
TGCTCTTCATCTGAGGTCTGCAAGGACATCTTTCGTCCCTAGAATCAGTCAGCAGTCCAG
CTCTGCTCAACAATTTCTCTCACTCTGCGATTGTACTCCCTTTTATTCTCACTGAACATC
CGAGCTGCTTCCGAGTTTGCAGGTGAGTTGGGGTTTGGATCACACAGCACTGAATGGATG
TAAGTATTGCCGCAACATCATAAATTGGACTCCATTGATTCTGAAGAATATCCAAACATG
CGAGAAACAAACCGCACTGTTGGTGGCTTGTTGGGGTAATCCTCAGAGAATTGAAGAGTC
AACTTGAACGTACCTGCCAAATATCACGGCATTCCAAAGCATAATGTTGTTGTCTTGAGG
TGCACCACTAATACCAGCAGGAGGGTCCTGCTGCAACCTCTTGAAATCCCTCATCAGCCT
CTTTCTAGCTGGAGTCGACATTGACTTACCAATACGGCGGTAACAAGGCGGGGAGGATGG
CTTTGATTTATCATCCTCACGCTCTTTTCTTCCCTTTCCAAACTAAATTAAACACAAAAC
ATAATTAATCTTATGAGGAACTAAATAATATATATATAGTTTATGATGTGTATTAAATTA
AAATGTGAATTATGATTTGAAATGCAAGCTTATGAGATGAATTGAGAATTATGATATAAA
AAATTTCAAACTTTTAATTAAGTGTACGTTTAGTAAGAATTTTGAATAAAAATTCAAGTT
TCATAAGTTTGATTCCAAAAAAAAAATTATACCTGATGGATAATATTTTCTTGATTATCG
ATATCGCGATCTTCATCATCAGGACTATAATATTCAGCTTTGTTCTTGTTCTCCATGTAT
AGACCTAATTATCTCCTTTTAATTTCTCTAGCTAGATAGATTTCTCCAACTTTAGCAATA
TAGTCTTCTTTTATAAAAGAAGAGCTACCAGTGTTGGACTTCTTTTAAAATGATTCAAAC
TCAGTGGCTTAATTAACAGCAAATAAATTAAACAAAAATGTCAATGCACCAATTGTTCAC
AACTTTAAGTAATAAATATAGTAAGATTTATGTATAATATATTGTCTTACTTGAAAAAAA
TGGATTATTAAAAAAACGGCTACAGAAAAAGAAATATTCAACTTCAACGTTTAAGTCCTT
TTATTTTTTTTTAGATATACTCCGTAATGGTCGGTGTCTCTTCATTTCTGAGCTTTTAAT
TAATTAATTATATTTTTCTCTTTATTTTCTTTCTTTTTCTCCAAGTTGTCACAGCTATTG
TTGAAGTTTCCTAAGTCACATGGCCACATTATTTGCCAGTCAAACGATAACGTGATAATT
CTCATCTGGTTCCATTATCTGAATTTCGATTTATTGTTCTGATCATTTAGTGAGATTTTA
CTAATCATATGTTATTATTGGCGTAATTAATGCAGATTCATGTTATACTAAGTAGTAAAA
CCATTTTATTAAAAAAGGTTCTCTATTCCTTTAAGGATCGAATTTAGAACTCACTCATCA
GGTTAATGTTAGGATCGAATTTAGAACTC