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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g069780.3.1
CDS Infomation

RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** AT3G47550.6)
Sequence

ATGGAAGAACATTTGGTTTTGCGTGTTGACCATCTTATCACACCCGAATCATTGCACTCT
CTGCCACGGCCCGAGCATACAGAATTATCTGGGGGCACATCTGTCACTCAGACAGTTGGT
ACATCCTCAGGTATTGATGCTCAAGAGAACGAATATCAAAGAGCTGGAGATGAAGAAGAG
CCATTACTTCAGACTGTGGAATGTCGGATTTGTCAGGAAGAAGATAGCTTGAAAAATTTG
GAGATTCCTTGTGGTTGCAGTGGCAGCTTGAAGGACATTGATTCAACCAATAAAAATTTA
AGGCCATTGATACTTAAGAATCACAAATTTGGAATGCCAGTGATGCTTGCTGAAAGACTT
TATCATCCTGGCTATACTGCTCGGCCCGCGTCTCCTCAATCTGAAGATACATCCATTGAC
ATCAGAGGTTGGACAGTGGGTGGCACTCAGGTCGACTTTCATGATCCTCGACTTCTTGCA
ATGGCTGCTGCTGAACGCCGTCTTCTAGAGGCTGACTATGACGAATATTCAGATTCAAAT
GCTAGTGGAGCTGCATTTTTTCGGTCTGCCGCTTTGATTCTATTGGCCCTTCTGTTACTG
AGGCATGCTCTGATAGTTGGAGATGCTAATGAGGATGAGGATGATGTTTCCACCTTTTTT
ATGCTTTTCCTGCTCCGCGCTGCCGGTTTTCTTTTACCTTGTTACATTATAGCTTGGGCT
ATCGGTATATTGCAGCGTCGCAGGCAAAGACAGGTTTGTCAA

Peptide Sequence

PEP ID

Solyc06g069780.3.1
PEP Infomation

RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** AT3G47550.6)
Sequence

MEEHLVLRVDHLITPESLHSLPRPEHTELSGGTSVTQTVGTSSGIDAQENEYQRAGDEEE
PLLQTVECRICQEEDSLKNLEIPCGCSGSLKDIDSTNKNLRPLILKNHKFGMPVMLAERL
YHPGYTARPASPQSEDTSIDIRGWTVGGTQVDFHDPRLLAMAAAERRLLEADYDEYSDSN
ASGAAFFRSAALILLALLLLRHALIVGDANEDEDDVSTFFMLFLLRAAGFLLPCYIIAWA
IGILQRRRQRQVCQ

Transcript Sequence

Transcript ID

Solyc06g069780.3.1
Transcript Infomation

RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** AT3G47550.6)
Sequence

TTTATCATTAATTACTAAGCAAACCCCACAAGGAAAAATGTTGCTGCGACTTTTCTTGTC
TGAAAAAGAGTAGTATATATTCATTAGCTTCTAAGCTGGTTCTTCACAAAGCTAACCCAT
CAAGAATTGCATATTCAGGATAATTTGGTGAACTGTTAATGGAAGAACATTTGGTTTTGC
GTGTTGACCATCTTATCACACCCGAATCATTGCACTCTCTGCCACGGCCCGAGCATACAG
AATTATCTGGGGGCACATCTGTCACTCAGACAGTTGGTACATCCTCAGGTATTGATGCTC
AAGAGAACGAATATCAAAGAGCTGGAGATGAAGAAGAGCCATTACTTCAGACTGTGGAAT
GTCGGATTTGTCAGGAAGAAGATAGCTTGAAAAATTTGGAGATTCCTTGTGGTTGCAGTG
GCAGCTTGAAGGACATTGATTCAACCAATAAAAATTTAAGGCCATTGATACTTAAGAATC
ACAAATTTGGAATGCCAGTGATGCTTGCTGAAAGACTTTATCATCCTGGCTATACTGCTC
GGCCCGCGTCTCCTCAATCTGAAGATACATCCATTGACATCAGAGGTTGGACAGTGGGTG
GCACTCAGGTCGACTTTCATGATCCTCGACTTCTTGCAATGGCTGCTGCTGAACGCCGTC
TTCTAGAGGCTGACTATGACGAATATTCAGATTCAAATGCTAGTGGAGCTGCATTTTTTC
GGTCTGCCGCTTTGATTCTATTGGCCCTTCTGTTACTGAGGCATGCTCTGATAGTTGGAG
ATGCTAATGAGGATGAGGATGATGTTTCCACCTTTTTTATGCTTTTCCTGCTCCGCGCTG
CCGGTTTTCTTTTACCTTGTTACATTATAGCTTGGGCTATCGGTATATTGCAGCGTCGCA
GGCAAAGACAGGTTTGTCAA