Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g069240.2.1
CDS Infomation

branched1b
Sequence

ATGTATCCTCCAAGCAACAATAACTGCAGCCCAATTTTGTCTTCTTTGATATGCCAAAAT
ATTCCATCTTCTCCTTGTATGCAATATGAACACGAACTATACTTTCAAAGCTTTAATCAT
GATAACCAATATTATTTTCAACAACAGCAACTAGTTCCCTCGATAGATGATTTGAGTCCT
CACATCTTAGCTGACAGCTGCACCGAGATTATTACTAAGCCTTCGAATTGCAACCACGAA
CTACAAGGAATGGAAGAAGGCCGAGGCGAAAAGAAAGGAGATGATGATGTTATGAGTAGC
AGAATTAGTGGACGGATCTCAAAAAATAATAAGAGATCTTCCAATAAAGATCGACACAGC
AAGATCAACACCGCTCGTGGTCCAAGAGATCGAAGGATGAGACTTTCACTTGATGCTGCT
CGCAAGTTTTTCCGTTTGCAGGACTTATTGGGATTCGATAAGGCCAGCAAAACTGTTGAA
TGGTTGCTTACTCAATCGGATTCTGCAATTGAAGAGCTTGTTGCCGCTAAAGGCAATGAT
GCACAGGTTGCTCAGCAAACTAGCTGCAATACCCCCACTACTACTACTGGAATTGGTGCA
ATTTGTGCATCTAATTCTATTTCTGAGTCGTGTGAAGTTATATCAGGAACTGATGAAACT
TCCTCTAATGACAAAAACAAGGAAACCGCTCAAGATGAGGAGAAGAAGAAAAGGAAGAAG
GTGGTTAACACAGCTCGTAGAGCTGTGTTAGAACCTCTTACGAAGGAATCGAGGAATCAA
GCAAGAGCCAGGGCTAGAGAGAGAACAAAATCAAAGAAAATGAGCCAAACTGGAAAATCC
AAATCCCTAGCTAATGATTTGAACCCTTCAGGATCTCGGAGGCCGGCTAATAAAACTTGT
GAAGAACCTGGAACACATGAAGAACTCAACTTCCATCAAGAGAAGAACACTGTCGATGAC
TGTAATTTTATGGTAAATGGAAATTGGAATCCATTTACAATCTTTAGCTATCATGAGCAA
TACGCTGGAATTTCCAACGAGACTTGCAATTTTGTGGAAAGCTATGGGAAGGCTAGGGCA
AGGAATTTCGAAGCGGACAAAGTTCCTTCTTCATTTTGTGCTGGAAATTCAAAGCGGATA
AAGTTCCTTCTTCATTTTGTGCTTACTCGGCCACAGCAGAAGAACGTTTCCGGCCTGTAT
CTGTTGGTAAATGTAACATAG

Peptide Sequence

PEP ID

Solyc06g069240.2.1
PEP Infomation

branched1b
Sequence

MYPPSNNNCSPILSSLICQNIPSSPCMQYEHELYFQSFNHDNQYYFQQQQLVPSIDDLSP
HILADSCTEIITKPSNCNHELQGMEEGRGEKKGDDDVMSSRISGRISKNNKRSSNKDRHS
KINTARGPRDRRMRLSLDAARKFFRLQDLLGFDKASKTVEWLLTQSDSAIEELVAAKGND
AQVAQQTSCNTPTTTTGIGAICASNSISESCEVISGTDETSSNDKNKETAQDEEKKKRKK
VVNTARRAVLEPLTKESRNQARARARERTKSKKMSQTGKSKSLANDLNPSGSRRPANKTC
EEPGTHEELNFHQEKNTVDDCNFMVNGNWNPFTIFSYHEQYAGISNETCNFVESYGKARA
RNFEADKVPSSFCAGNSKRIKFLLHFVLTRPQQKNVSGLYLLVNVT*

Transcript Sequence

Transcript ID

Solyc06g069240.2.1
Transcript Infomation

branched1b
Sequence

CATTATATGTATTGAATTAAGGGGGGGGATGGGTCTAGTTAGGGTTGTGGAAAGGAGGTT
GGAGAGAGTGGTTTTTCAGTGTGTGTGTCGGGTGATATCACGTGAAGGGGCACGATAACA
AGTTGTTCGTATCCATCCATTCACTTCCAACAATACCGCTACGTACCACTACCTGCTTCC
TTCCTATCCCCAGTCTTTGTCAAACTTCCTTTCCCTTTCCAATTACTTTTTCTTTAATAG
AGATGTTTGTTTCCTTTTCCCTTCCCCCCATATTCTTCCCTTTTTTTTTTATCTCTCTTT
CACAATAGTAGCACCATGCCTGTAGCTTTGATGCTTAGACGGGCGCACGCGCACGCGCAC
TCACACAACTAGAATAGAATCACTCTCTCTATATATTCATAGTTATCAAAACTACTTATC
ATATACCAAAAAAAACCACTGTCATTCTCAAGCAAATAATAATTTTTTTAAAAAAGAAGA
ACTACATATATATATATAGTACTACTACTATTTTCATCATCACTTTGGTCAATCCATACA
GTTCTAAGTAGTCATTGCTTCCTCTGTCAAATTACTGTATACAGTACATTGAACTAGCTA
GGGGAAAATTAATCTACTAACTCTAATTTGTTTGTTTAATTCTCTTCTTATTGCAGCTAG
ATTTGCCTAATTAGCAGAAAAACCAAAAGCTGTGTTCATACTGTCTTTCTCAAGATCTAG
ACCCACCATATAGACCGCCTCAACTACAGCTACTCCACAAATGTATCCTCCAAGCAACAA
TAACTGCAGCCCAATTTTGTCTTCTTTGATATGCCAAAATATTCCATCTTCTCCTTGTAT
GCAATATGAACACGAACTATACTTTCAAAGCTTTAATCATGATAACCAATATTATTTTCA
ACAACAGCAACTAGTTCCCTCGATAGATGATTTGAGTCCTCACATCTTAGCTGACAGCTG
CACCGAGATTATTACTAAGCCTTCGAATTGCAACCACGAACTACAAGGAATGGAAGAAGG
CCGAGGCGAAAAGAAAGGAGATGATGATGTTATGAGTAGCAGAATTAGTGGACGGATCTC
AAAAAATAATAAGAGATCTTCCAATAAAGATCGACACAGCAAGATCAACACCGCTCGTGG
TCCAAGAGATCGAAGGATGAGACTTTCACTTGATGCTGCTCGCAAGTTTTTCCGTTTGCA
GGACTTATTGGGATTCGATAAGGCCAGCAAAACTGTTGAATGGTTGCTTACTCAATCGGA
TTCTGCAATTGAAGAGCTTGTTGCCGCTAAAGGCAATGATGCACAGGTTGCTCAGCAAAC
TAGCTGCAATACCCCCACTACTACTACTGGAATTGGTGCAATTTGTGCATCTAATTCTAT
TTCTGAGTCGTGTGAAGTTATATCAGGAACTGATGAAACTTCCTCTAATGACAAAAACAA
GGAAACCGCTCAAGATGAGGAGAAGAAGAAAAGGAAGAAGGTGGTTAACACAGCTCGTAG
AGCTGTGTTAGAACCTCTTACGAAGGAATCGAGGAATCAAGCAAGAGCCAGGGCTAGAGA
GAGAACAAAATCAAAGAAAATGAGCCAAACTGGAAAATCCAAATCCCTAGCTAATGATTT
GAACCCTTCAGGATCTCGGAGGCCGGCTAATAAAACTTGTGAAGAACCTGGAACACATGA
AGAACTCAACTTCCATCAAGAGAAGAACACTGTCGATGACTGTAATTTTATGGTAAATGG
AAATTGGAATCCATTTACAATCTTTAGCTATCATGAGCAATACGCTGGAATTTCCAACGA
GACTTGCAATTTTGTGGAAAGCTATGGGAAGGCTAGGGCAAGGAATTTCGAAGCGGACAA
AGTTCCTTCTTCATTTTGTGCTGGAAATTCAAAGCGGATAAAGTTCCTTCTTCATTTTGT
GCTTACTCGGCCACAGCAGAAGAACGTTTCCGGCCTGTATCTGTTGGTAAATGTAACATA
G