Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g069210.3.1
CDS Infomation

CASP-like protein
Sequence

ATGGATTCCCCGCGAGGAGGACCGGAGAGAGACAAGGCGAACTCAACGTCTTCATCTACT
CCCCTCGCTGCCGTCGCCAGCTTCTGGAAAGACTTTGATTTGGAGAAAGAAAGGAGTACA
CTAGATGAGCAAGGTCTTAGGATTGCTGAGAATCAGGAGAACAGTCAGAAGAACCGACGA
AAACTTGCAGAGAGCACTCGAGATTTTAAAAAAGCTTCAAGTGAAGACAAGTTGAGCTTG
TTCAACTCTTTGCTCAAGGGGTACCAAGAAGAGGTTGACAATCTTACCAAGAGAGCTAAG
TATGGGGAAAATGCTTTCCTTAACATTTATCAAAAACTATATGAGGCACCAGATCCTTAT
CCAGTCATTGCTTCAATTGCTGAAAAGGATTCAAAGCTATCAGAATTAGAGTCTGAGAAC
CGAAAAATGAAGGTTGAACTTGAAGAATTTCGCATGGAAGCAACTCATCTGAAAAATCAA
CAAGCGACAATAAGAAGACTTGAAGAGCGGTGCCGCCAGTTAGAGCAACAGATGGAGGAA
AAAGTCAAGGAAATTGTAGAAATCAAGCAACGCAGTTTGGCAGAAGAGAACCAGAAAGCA
CTTGAGGTTTTAAAAGAAAGGGAGCAATTACTACAGGATCAATTACGACAAGCTCAAGAA
AGTGTTTCTACCATGCAAAAGTTGCATGAACTTGCACAAAGCCAGTTGTTTGAAGTTCGT
GCGCAATCAGAGGAAGAGAGAGCCGCAAAGCAATCGGAATTCAATCTCCTAATGGATGAA
GTTGAACGGGCTCAAGGTCGCCTTCTTAGTCTTGAAAGAGAAAAGGGATTGTTGCGCTCA
CAATTACAGACTGCAAACGAAGATAATGATCACAAGAACAGTGATAATTTGGATGCAGAT
AGTGCTTTTGAGAATTCTCTGTATGCCAAAGAGAAGATAATCTCTGAACTAAATGTGGAA
CTTCATAAGTTGGAGAACACTTTATCAAATGAACGAGAAGAACACATTAATGAGATAAAG
AAGTTGAATTCTCTTCTTAATGAAAAGGAGGTTGCTCTTGAAGATCTAAAGAAGGAGCTT
CAAACACGGCCTACAACAAAACTGATAGATGATTTGAGGAAGAAAGTAAAGATCTTACAG
GCTGTGGGTTACAATTCAATTGAAGCTGAAGATTGGGAAGTTGCTACCAGTGGGCAAGAG
ATGAGCAAACTTGAGTCGTTACTTCTTGACAAGAATCGAAAAGTGGAGCATGAGCTAACA
CAATTAAAGGTCCAACTTTCTGAGAGGATTTCTTTGCTGGAATCAGCTGAAGCAAAGGTT
GTAGAGCTGACTGCCAAGGTTAATGAACAACAAAGATTAATACAGAAGCTAGAAGATGAT
ATTCTAAAGGGATATAATTCTAAAGATAGAAAAGGTACTCGATTTGATGATTGGGATTTA
TCAGAGTCTGGTGCAACAGAGCCTTCAGAGAATGAAGAGCAGAGGCATGTTTCCTCAGAC
CAAGATCAAAGCTCAATGCTGAAGGTGATCTGCAACCAAAGAGACCGTTTCCGTACCCGT
TTGCGGGAGACTGAAGAGGAAATTAGACAGCTGAAGGAGAAGATAGGATCACTGACCTCA
GAACTTGATAAAACAAAAGCAGATAATGTCAAACTTTATGGGAAGATCCGTTACGTTCAG
GATTATAATTCTGAAAGAGTGATCTCAAGAGGATCAAAAAAGTACGTAGAAGATTTAGAA
GGTGGTTTCAGCTCTGACGTGGAATCCAAATACAAGAAGATGTATGAGGATGACATAAAT
CCATTTGCGGCATTCTCGAAGAAGGAAAGAGATCAAAGATACAAGGAATTAGGTTTGAGA
GACAAGATTACTCTCAGTAGTGGCCGTTTTCTTCTTGGTAACAAATATGCTCGGACATTT
GTATTCTTCTACACTATTGGATTGCACATTTTAGTATTCACCTGCCTATACAGGATGTCA
GCATTGAGCTACCTCAGCCATGGCGAAGAATCTCTTGTCAGCGAAAAGAATCTCAATCTT
CCTCATGCACTATAG

Peptide Sequence

PEP ID

Solyc06g069210.3.1
PEP Infomation

CASP-like protein
Sequence

MDSPRGGPERDKANSTSSSTPLAAVASFWKDFDLEKERSTLDEQGLRIAENQENSQKNRR
KLAESTRDFKKASSEDKLSLFNSLLKGYQEEVDNLTKRAKYGENAFLNIYQKLYEAPDPY
PVIASIAEKDSKLSELESENRKMKVELEEFRMEATHLKNQQATIRRLEERCRQLEQQMEE
KVKEIVEIKQRSLAEENQKALEVLKEREQLLQDQLRQAQESVSTMQKLHELAQSQLFEVR
AQSEEERAAKQSEFNLLMDEVERAQGRLLSLEREKGLLRSQLQTANEDNDHKNSDNLDAD
SAFENSLYAKEKIISELNVELHKLENTLSNEREEHINEIKKLNSLLNEKEVALEDLKKEL
QTRPTTKLIDDLRKKVKILQAVGYNSIEAEDWEVATSGQEMSKLESLLLDKNRKVEHELT
QLKVQLSERISLLESAEAKVVELTAKVNEQQRLIQKLEDDILKGYNSKDRKGTRFDDWDL
SESGATEPSENEEQRHVSSDQDQSSMLKVICNQRDRFRTRLRETEEEIRQLKEKIGSLTS
ELDKTKADNVKLYGKIRYVQDYNSERVISRGSKKYVEDLEGGFSSDVESKYKKMYEDDIN
PFAAFSKKERDQRYKELGLRDKITLSSGRFLLGNKYARTFVFFYTIGLHILVFTCLYRMS
ALSYLSHGEESLVSEKNLNLPHAL*

Transcript Sequence

Transcript ID

Solyc06g069210.3.1
Transcript Infomation

CASP-like protein
Sequence

AATTCCCAAAAAGTTTATGTACCAAACGAAGTCCGGAAAATGACCCGATGAATAATATGG
GTGACCCGGATTTGTTTCTCCATCGAACTCACGTCTCTCTTTCATCCTATGCTGCAACAA
AATTAATTTCAAAGGAACCACAAAGCTCGAGATCTGTGATCTATCAAAACCAGTAGAACT
ATCGTTTCGTAACAATTTCTTCGCATTAAGTGGAGAAATAGACAGATTGAAGTTTTTGTC
GGAGCAAAAGCTGAATTTGTGGTGGATCAGCAATGGATTCCCCGCGAGGAGGACCGGAGA
GAGACAAGGCGAACTCAACGTCTTCATCTACTCCCCTCGCTGCCGTCGCCAGCTTCTGGA
AAGACTTTGATTTGGAGAAAGAAAGGAGTACACTAGATGAGCAAGGTCTTAGGATTGCTG
AGAATCAGGAGAACAGTCAGAAGAACCGACGAAAACTTGCAGAGAGCACTCGAGATTTTA
AAAAAGCTTCAAGTGAAGACAAGTTGAGCTTGTTCAACTCTTTGCTCAAGGGGTACCAAG
AAGAGGTTGACAATCTTACCAAGAGAGCTAAGTATGGGGAAAATGCTTTCCTTAACATTT
ATCAAAAACTATATGAGGCACCAGATCCTTATCCAGTCATTGCTTCAATTGCTGAAAAGG
ATTCAAAGCTATCAGAATTAGAGTCTGAGAACCGAAAAATGAAGGTTGAACTTGAAGAAT
TTCGCATGGAAGCAACTCATCTGAAAAATCAACAAGCGACAATAAGAAGACTTGAAGAGC
GGTGCCGCCAGTTAGAGCAACAGATGGAGGAAAAAGTCAAGGAAATTGTAGAAATCAAGC
AACGCAGTTTGGCAGAAGAGAACCAGAAAGCACTTGAGGTTTTAAAAGAAAGGGAGCAAT
TACTACAGGATCAATTACGACAAGCTCAAGAAAGTGTTTCTACCATGCAAAAGTTGCATG
AACTTGCACAAAGCCAGTTGTTTGAAGTTCGTGCGCAATCAGAGGAAGAGAGAGCCGCAA
AGCAATCGGAATTCAATCTCCTAATGGATGAAGTTGAACGGGCTCAAGGTCGCCTTCTTA
GTCTTGAAAGAGAAAAGGGATTGTTGCGCTCACAATTACAGACTGCAAACGAAGATAATG
ATCACAAGAACAGTGATAATTTGGATGCAGATAGTGCTTTTGAGAATTCTCTGTATGCCA
AAGAGAAGATAATCTCTGAACTAAATGTGGAACTTCATAAGTTGGAGAACACTTTATCAA
ATGAACGAGAAGAACACATTAATGAGATAAAGAAGTTGAATTCTCTTCTTAATGAAAAGG
AGGTTGCTCTTGAAGATCTAAAGAAGGAGCTTCAAACACGGCCTACAACAAAACTGATAG
ATGATTTGAGGAAGAAAGTAAAGATCTTACAGGCTGTGGGTTACAATTCAATTGAAGCTG
AAGATTGGGAAGTTGCTACCAGTGGGCAAGAGATGAGCAAACTTGAGTCGTTACTTCTTG
ACAAGAATCGAAAAGTGGAGCATGAGCTAACACAATTAAAGGTCCAACTTTCTGAGAGGA
TTTCTTTGCTGGAATCAGCTGAAGCAAAGGTTGTAGAGCTGACTGCCAAGGTTAATGAAC
AACAAAGATTAATACAGAAGCTAGAAGATGATATTCTAAAGGGATATAATTCTAAAGATA
GAAAAGGTACTCGATTTGATGATTGGGATTTATCAGAGTCTGGTGCAACAGAGCCTTCAG
AGAATGAAGAGCAGAGGCATGTTTCCTCAGACCAAGATCAAAGCTCAATGCTGAAGGTGA
TCTGCAACCAAAGAGACCGTTTCCGTACCCGTTTGCGGGAGACTGAAGAGGAAATTAGAC
AGCTGAAGGAGAAGATAGGATCACTGACCTCAGAACTTGATAAAACAAAAGCAGATAATG
TCAAACTTTATGGGAAGATCCGTTACGTTCAGGATTATAATTCTGAAAGAGTGATCTCAA
GAGGATCAAAAAAGTACGTAGAAGATTTAGAAGGTGGTTTCAGCTCTGACGTGGAATCCA
AATACAAGAAGATGTATGAGGATGACATAAATCCATTTGCGGCATTCTCGAAGAAGGAAA
GAGATCAAAGATACAAGGAATTAGGTTTGAGAGACAAGATTACTCTCAGTAGTGGCCGTT
TTCTTCTTGGTAACAAATATGCTCGGACATTTGTATTCTTCTACACTATTGGATTGCACA
TTTTAGTATTCACCTGCCTATACAGGATGTCAGCATTGAGCTACCTCAGCCATGGCGAAG
AATCTCTTGTCAGCGAAAAGAATCTCAATCTTCCTCATGCACTATAGACTCCTTCATTGT
CTCAAGTTTTTGCTAATCACAACGGAACAATGAAACTCTCCAAATGATGTAAATAGTTGG
GAAAAAATGCATTGGTTGTTTTATTCAAGTTTGATAGTGCGAAGAAAATGATAAAAATCT
ACTATATATTTACCCAAGGGTTTCTGTCCTTGTTTTACTATTTTTGCCCCATTGCTCTGC
TGGTGATTATCCCAGCCTATGCGCAATATACAATTGAAAGAGTAATGCGGAGTCTGAGAT
ATAGACATTTTTTTTGAATTTCAAGAATCATTTATCCTTTGTACTCTTTTGTCATTTCCT
TTCTCTTTATTTATCTTATTATTATTTCAATCATCTGTC