Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc06g069010.3.1
CDS Infomation

LeArcA1 protein
Sequence

ATGTCGCAAGAATCACTAGTCCTCCGCGGTACCATGAAAGCCCACACTGACTGGGTCACT
GCTATTGCAACCCCAATTGACAACTCCGACATGATTGTCACCTCCTCCAGGGATAAGTCC
ATCATCGTCTGGTCTTTGACTAAAGACGGCTCACAATACGGTGTCCCTCGTCGCCGTCTT
ACCGGACATGGCCATTTCGTTGAAGATGTCGTGTTGTCGTCTGACGGCATGTTTGCACTC
TCCGGTTCATGGGACGGTGAGCTCCGTTTATGGGATCTTCAAGCTGGAACAACTGCTCGT
CGTTTCGTTGGACACACTAAAGATGTTCTCTCTGTTGCATTCTCTGTTGACAACCGTCAG
ATTGTCTCTGCTTCCCGTGACAAGACCATCAAGCTATGGAACACACTCGGTGAGTGCAAG
TACACAATTCAGGAACAGGATTCACACTCTGATTGGGTTTCTTGTGTCCGTTTTAGCCCA
AATAATCTTCAGCCCACTATTGTGTCTGGTTCATGGGATCGCACTGTCAAAATCTGGAAT
CTCACCAACTGTAAGCTCAGGTCTACTCTTGCGGGTCACAGCGGGTATGTGAATACTGTG
GCCGTGTCCCCAGATGGTTCGTTGTGTGCTAGCGGAGGGAAAGATGGTGTCATATTGCTA
TGGGATTTGGCTGAAGGGAAGAAACTGTACTCTCTTGATGCTGGCTCCATTATCCACACC
CTCTGTTTTAGCCCGAATAGGTATTGGCTCTGTGCTGCTACTGAATCTAGTATCAAGATT
TGGGATTTGGAGAGCAAAAGCATCGTGGTTGATCTTAAAGTTGATCTGAAACAAGAGAGT
GAAATGTTCGGAACTGCTGCTACCGATTCCAAAACCAAGGTCATATACTGCACCAGTTTG
AGCTGGAGTGCTGATGGAAGCACACTTTTCAGTGGCTATACAGATGGTCTGATTAGAGTT
TGGGGAATTGGACGTTATTAG

Peptide Sequence

PEP ID

Solyc06g069010.3.1
PEP Infomation

LeArcA1 protein
Sequence

MSQESLVLRGTMKAHTDWVTAIATPIDNSDMIVTSSRDKSIIVWSLTKDGSQYGVPRRRL
TGHGHFVEDVVLSSDGMFALSGSWDGELRLWDLQAGTTARRFVGHTKDVLSVAFSVDNRQ
IVSASRDKTIKLWNTLGECKYTIQEQDSHSDWVSCVRFSPNNLQPTIVSGSWDRTVKIWN
LTNCKLRSTLAGHSGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLDAGSIIHT
LCFSPNRYWLCAATESSIKIWDLESKSIVVDLKVDLKQESEMFGTAATDSKTKVIYCTSL
SWSADGSTLFSGYTDGLIRVWGIGRY*

Transcript Sequence

Transcript ID

Solyc06g069010.3.1
Transcript Infomation

LeArcA1 protein
Sequence

ATCCGCTTAAAACCCTAGAGTTTTCTCTCCATTTTCATCTCCGCCTCTCCTTTCTCTGCC
ACCAAAGGTGATTTCACTGACGGCCGCCACCAATCTGAGAAAATGTCGCAAGAATCACTA
GTCCTCCGCGGTACCATGAAAGCCCACACTGACTGGGTCACTGCTATTGCAACCCCAATT
GACAACTCCGACATGATTGTCACCTCCTCCAGGGATAAGTCCATCATCGTCTGGTCTTTG
ACTAAAGACGGCTCACAATACGGTGTCCCTCGTCGCCGTCTTACCGGACATGGCCATTTC
GTTGAAGATGTCGTGTTGTCGTCTGACGGCATGTTTGCACTCTCCGGTTCATGGGACGGT
GAGCTCCGTTTATGGGATCTTCAAGCTGGAACAACTGCTCGTCGTTTCGTTGGACACACT
AAAGATGTTCTCTCTGTTGCATTCTCTGTTGACAACCGTCAGATTGTCTCTGCTTCCCGT
GACAAGACCATCAAGCTATGGAACACACTCGGTGAGTGCAAGTACACAATTCAGGAACAG
GATTCACACTCTGATTGGGTTTCTTGTGTCCGTTTTAGCCCAAATAATCTTCAGCCCACT
ATTGTGTCTGGTTCATGGGATCGCACTGTCAAAATCTGGAATCTCACCAACTGTAAGCTC
AGGTCTACTCTTGCGGGTCACAGCGGGTATGTGAATACTGTGGCCGTGTCCCCAGATGGT
TCGTTGTGTGCTAGCGGAGGGAAAGATGGTGTCATATTGCTATGGGATTTGGCTGAAGGG
AAGAAACTGTACTCTCTTGATGCTGGCTCCATTATCCACACCCTCTGTTTTAGCCCGAAT
AGGTATTGGCTCTGTGCTGCTACTGAATCTAGTATCAAGATTTGGGATTTGGAGAGCAAA
AGCATCGTGGTTGATCTTAAAGTTGATCTGAAACAAGAGAGTGAAATGTTCGGAACTGCT
GCTACCGATTCCAAAACCAAGGTCATATACTGCACCAGTTTGAGCTGGAGTGCTGATGGA
AGCACACTTTTCAGTGGCTATACAGATGGTCTGATTAGAGTTTGGGGAATTGGACGTTAT
TAGGGAAGAAGAGGATCGACGCGAGCCATTTGGCCAATACTGAATTAAAAGTCTTTTAGA
TTTTGAAGATTCTCCGTGTTTTTCATTATTATGAGGCCTCAACTGTTTCAATTTTGGATT
TTTATTTTGTTACATTGGATATCTGTCTTGCTATAAATCTAAGTTGTTTTGCTTAATCTT
CATGTATTGGAGTTTCTTGCTTGTTGTTTACCTCCATCTTCATTAAATCATCACTTCATA
TGTCTCTTTTCCTACATCTCCCAGCCTTTGTTAACTCGC